FFCP PHASE1:Mm9::chr19:11124926..11124931,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107350 | |EntrezGene=107350 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1074 | |MCL_coexpression_id=1074 | ||
|TSSclassifier=NA | |||
|UniProt=Q3U6J0 | |UniProt=Q3U6J0 | ||
|association_with_transcript=124bp_to_ENSMUST00000099676,NM_001177351,uc008grn.2_5end | |association_with_transcript=124bp_to_ENSMUST00000099676,NM_001177351,uc008grn.2_5end | ||
|cluster_id=chr19:11124926..11124931,- | |||
|description=CAGE_peak_2_at_AW112010_5end | |description=CAGE_peak_2_at_AW112010_5end | ||
|id=chr19:11124926..11124931,- | |id=chr19:11124926..11124931,- | ||
|ontology_enrichment_celltype=CL:0000063!2.71e-11!66;CL:0002320!6.80e-08!46;CL:0000134!6.80e-08!46;CL:0000414!8.34e-07!11 | |ontology_enrichment_celltype=CL:0000063!2.71e-11!66;CL:0002320!6.80e-08!46;CL:0000134!6.80e-08!46;CL:0000414!8.34e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.57e-10,46;CL:0000134,4.57e-10,46;CL:0000066,1.35e-07,25;CL:0000219,2.13e-07,54;CL:0000988,4.19e-07,32;CL:0002032,4.19e-07,32;CL:0000037,4.19e-07,32;CL:0000837,4.19e-07,32;CL:0000049,5.43e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.86e-14!128;UBERON:0001555!3.86e-14!128;UBERON:0007026!3.86e-14!128;UBERON:0004119!5.13e-14!130;UBERON:0000925!5.13e-14!130;UBERON:0006595!5.13e-14!130;UBERON:0002405!3.79e-13!70;UBERON:0004921!4.57e-13!126;UBERON:0004185!4.57e-13!126;UBERON:0000344!5.80e-09!15;UBERON:0003929!1.34e-08!55;UBERON:0002193!3.05e-08!48;UBERON:0002384!6.80e-08!46;UBERON:0004923!1.09e-07!24;UBERON:0005911!1.17e-07!69;UBERON:0001242!1.18e-07!13;UBERON:0000060!1.18e-07!13;UBERON:0001262!1.18e-07!13;UBERON:0004786!1.18e-07!13;UBERON:0000490!4.82e-07!66;UBERON:0002390!8.64e-07!45;UBERON:0003061!8.64e-07!45 | |ontology_enrichment_uberon=UBERON:0001007!3.86e-14!128;UBERON:0001555!3.86e-14!128;UBERON:0007026!3.86e-14!128;UBERON:0004119!5.13e-14!130;UBERON:0000925!5.13e-14!130;UBERON:0006595!5.13e-14!130;UBERON:0002405!3.79e-13!70;UBERON:0004921!4.57e-13!126;UBERON:0004185!4.57e-13!126;UBERON:0000344!5.80e-09!15;UBERON:0003929!1.34e-08!55;UBERON:0002193!3.05e-08!48;UBERON:0002384!6.80e-08!46;UBERON:0004923!1.09e-07!24;UBERON:0005911!1.17e-07!69;UBERON:0001242!1.18e-07!13;UBERON:0000060!1.18e-07!13;UBERON:0001262!1.18e-07!13;UBERON:0004786!1.18e-07!13;UBERON:0000490!4.82e-07!66;UBERON:0002390!8.64e-07!45;UBERON:0003061!8.64e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.02e-12,116;UBERON:0001555,4.02e-12,116;UBERON:0007026,4.02e-12,116;UBERON:0004119,1.19e-11,118;UBERON:0000925,1.19e-11,118;UBERON:0006595,1.19e-11,118;UBERON:0004921,7.14e-11,114;UBERON:0000344,2.22e-10,15;UBERON:0002384,4.57e-10,46;UBERON:0005409,7.63e-10,47;UBERON:0000160,2.74e-09,31;UBERON:0001242,1.71e-08,13;UBERON:0001262,1.71e-08,13;UBERON:0004786,1.71e-08,13;UBERON:0002365,3.42e-08,25;UBERON:0002330,3.42e-08,25;UBERON:0004923,8.17e-08,24;UBERON:0002371,1.32e-07,16;UBERON:0009854,1.75e-07,23;UBERON:0009856,1.75e-07,23;UBERON:0002107,8.16e-07,22;UBERON:0007499,8.16e-07,22;UBERON:0006925,8.16e-07,22;UBERON:0009497,8.16e-07,22;UBERON:0000015,8.16e-07,22;UBERON:0002423,8.16e-07,22;UBERON:0006235,8.16e-07,22;UBERON:0008835,8.16e-07,22;UBERON:0003894,8.16e-07,22;UBERON:0004161,8.16e-07,22;UBERON:0008836,8.16e-07,22 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,0.60492842261366,1.00179145989269,5.87577451691614,4.67225281191051,5.55230290798778,0.281577444303333,0.234064526321993,0.34243593645101,0.478632953972018,2.9104124088305,2.62261207256992,1.99865857089398,2.02475267389826,0.699561878128147,6.30924330716475,4.66189074259512,2.54633791078818,0.680346321208558,0.496454756004426,0,4.31979541542198,8.02932483735095,7.46501553349526,9.90752591165872,10.3426191689227,6.08074942260396,5.04060259519861,15.7428662565266,0,0,0,0.577703239502549,2.82598897109437,2.6542016314108,0.418531630736908,1.5626706890476,1.57057123192139,0,0,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,2.34895648480831,2.17608642603403,1.34437519656986,0,0.286533439938757,0,0,0,0,0,0,4.94944844504769,7.9109309005358,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0,2.31891590961342,4.30211938490693,4.0798280022465,5.39703191637817,3.89865850468601,7.6164570806547,2.94933282276679,0,0,0,0,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,5.1382745873577,4.91981978929626,0.742210695324124,0,0,0,0.150722640552623,0,0.251333182659351,0,1.87979163995885,0,0.161766849947409,0,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,4.34276993854605,5.75112597628417,3.59941638596045,4.57452817463033,0.149790639404823,0,0,0.521472960576829,0,0.20778804455956,0,0,0.870848794270651,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.83082697826187,3.12579849335152,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,1.16959989940266,1.09775057645525,1.47627060636409,0.210289948564127,0,2.64335026387038,1.05780226665418,0,0,0,0,0.22237804384487,0.380451252225118,2.37264530772256,0.329397909448022,2.26201687920243,2.98434708061726,1.55971269695296,0.898819408654221,2.59365659849633,3.18626037206988,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,10.6722945751374,0,0,0.449724224769707,0,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,2.87536413054709,3.72140947668503,4.05648975048929,5.80931419278357,5.02312757861354,3.37710464954357,2.58654466233247,0,0,0,0,0.167506257441816,0,0,0.472905432318573,0.44292937929755,0.159454768657487,1.96635977658886,0.863424909329478,2.4590339958857,12.0633027151418,21.7562273527484,1.96705709207614,2.20749397043786,0,0,0,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0.32977250588296,0,0,0,0,1.45740418314925,0.18542530201051,2.9048049735635,0,0.185194527369712,1.13021074202815,0.956859594047176,2.28778173206523,6.28920190977265,8.25713568709582,4.97519905695926,2.86401185404534,0,0,0,0.627264888043406,0.87345025498471,1.75323650300267,2.31429676030941,1.83229159388821,2.20345454596048,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,2.21207784439725,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.605798699688886,0.609654453239999,0.302478555410522,0.779663045918019,1.53938946624527,1.16876902181569,0.453460767230423,0,0,0,1.54551675225752,1.31377732815827,0.549454872801795,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.441182838239031,1.62307484934295 | |phase1_expression=0,4.18770489167233,5.0049916332849,0.60492842261366,1.00179145989269,5.87577451691614,4.67225281191051,5.55230290798778,0.281577444303333,0.234064526321993,0.34243593645101,0.478632953972018,2.9104124088305,2.62261207256992,1.99865857089398,2.02475267389826,0.699561878128147,6.30924330716475,4.66189074259512,2.54633791078818,0.680346321208558,0.496454756004426,0,4.31979541542198,8.02932483735095,7.46501553349526,9.90752591165872,10.3426191689227,6.08074942260396,5.04060259519861,15.7428662565266,0,0,0,0.577703239502549,2.82598897109437,2.6542016314108,0.418531630736908,1.5626706890476,1.57057123192139,0,0,0.485510353031154,0.251793635951155,0,0,0,0,0,0,0,0,2.34895648480831,2.17608642603403,1.34437519656986,0,0.286533439938757,0,0,0,0,0,0,4.94944844504769,7.9109309005358,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0,2.31891590961342,4.30211938490693,4.0798280022465,5.39703191637817,3.89865850468601,7.6164570806547,2.94933282276679,0,0,0,0,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,5.1382745873577,4.91981978929626,0.742210695324124,0,0,0,0.150722640552623,0,0.251333182659351,0,1.87979163995885,0,0.161766849947409,0,0.484875253135222,3.72783522436244,0.292780797011547,0.209446706813455,4.34276993854605,5.75112597628417,3.59941638596045,4.57452817463033,0.149790639404823,0,0,0.521472960576829,0,0.20778804455956,0,0,0.870848794270651,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.83082697826187,3.12579849335152,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,1.16959989940266,1.09775057645525,1.47627060636409,0.210289948564127,0,2.64335026387038,1.05780226665418,0,0,0,0,0.22237804384487,0.380451252225118,2.37264530772256,0.329397909448022,2.26201687920243,2.98434708061726,1.55971269695296,0.898819408654221,2.59365659849633,3.18626037206988,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,10.6722945751374,0,0,0.449724224769707,0,0.241177159752417,1.01850340712568,0,0.162135226775035,0.274561413188081,2.87536413054709,3.72140947668503,4.05648975048929,5.80931419278357,5.02312757861354,3.37710464954357,2.58654466233247,0,0,0,0,0.167506257441816,0,0,0.472905432318573,0.44292937929755,0.159454768657487,1.96635977658886,0.863424909329478,2.4590339958857,12.0633027151418,21.7562273527484,1.96705709207614,2.20749397043786,0,0,0,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0.32977250588296,0,0,0,0,1.45740418314925,0.18542530201051,2.9048049735635,0,0.185194527369712,1.13021074202815,0.956859594047176,2.28778173206523,6.28920190977265,8.25713568709582,4.97519905695926,2.86401185404534,0,0,0,0.627264888043406,0.87345025498471,1.75323650300267,2.31429676030941,1.83229159388821,2.20345454596048,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,2.21207784439725,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.605798699688886,0.609654453239999,0.302478555410522,0.779663045918019,1.53938946624527,1.16876902181569,0.453460767230423,0,0,0,1.54551675225752,1.31377732815827,0.549454872801795,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.441182838239031,1.62307484934295 | ||
|short_description=p2@AW112010 | |short_description=p2@AW112010 | ||
}} | }} |
Latest revision as of 21:21, 1 October 2015
Short description: | p2@AW112010 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AW112010_5end |
Coexpression cluster: | MCL_coexpression_mm9:1074 |
Association with transcript: | 124bp_to_ENSMUST00000099676, NM_001177351, uc008grn.2_5end |
EntrezGene: | AW112010 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.57e-10 | 46 |
mesenchymal cell | 4.57e-10 | 46 |
epithelial cell | 1.35e-07 | 25 |
motile cell | 2.13e-07 | 54 |
hematopoietic cell | 4.19e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.19e-07 | 32 |
hematopoietic stem cell | 4.19e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.19e-07 | 32 |
common myeloid progenitor | 5.43e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
digestive system | 4.02e-12 | 116 |
digestive tract | 4.02e-12 | 116 |
primitive gut | 4.02e-12 | 116 |
endoderm-derived structure | 1.19e-11 | 118 |
endoderm | 1.19e-11 | 118 |
presumptive endoderm | 1.19e-11 | 118 |
subdivision of digestive tract | 7.14e-11 | 114 |
mucosa | 2.22e-10 | 15 |
connective tissue | 4.57e-10 | 46 |
gastrointestinal system | 7.63e-10 | 47 |
intestine | 2.74e-09 | 31 |
intestinal mucosa | 1.71e-08 | 13 |
wall of intestine | 1.71e-08 | 13 |
gastrointestinal system mucosa | 1.71e-08 | 13 |
exocrine gland | 3.42e-08 | 25 |
exocrine system | 3.42e-08 | 25 |
organ component layer | 8.17e-08 | 24 |
bone marrow | 1.32e-07 | 16 |
digestive tract diverticulum | 1.75e-07 | 23 |
sac | 1.75e-07 | 23 |
liver | 8.16e-07 | 22 |
epithelial sac | 8.16e-07 | 22 |
digestive gland | 8.16e-07 | 22 |
epithelium of foregut-midgut junction | 8.16e-07 | 22 |
anatomical boundary | 8.16e-07 | 22 |
hepatobiliary system | 8.16e-07 | 22 |
foregut-midgut junction | 8.16e-07 | 22 |
hepatic diverticulum | 8.16e-07 | 22 |
liver primordium | 8.16e-07 | 22 |
septum transversum | 8.16e-07 | 22 |
liver bud | 8.16e-07 | 22 |