FFCP PHASE1:Hg19::chr2:233195304..233195346,+: Difference between revisions
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|id=chr2:233195304..233195346,+
|short_description=p@chr2:233195304..233195346,+
|description=CAGE_peak_at_chr2:233195304..233195346,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:233195304..233195346,+ | |||
|coexpression_cluster_id=C655 | |||
|description=CAGE_peak_at_chr2:233195304..233195346,+ | |||
|id=chr2:233195304..233195346,+ | |||
|ontology_enrichment_celltype=CL:0000077!9.86e-17!19;CL:0000066!1.09e-09!254;CL:1001319!1.06e-07!1;CL:1000600!1.06e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002097;2.35e-11;2!CL:0000077;3.41e-10;19!CL:0000174;5.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.23e-11,2;CL:0000077,3.35e-10,19;CL:0000174,5.18e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.27e-24;29 | |||
|ontology_enrichment_disease=DOID:305!3.39e-13!106;DOID:0050687!5.80e-09!143;DOID:162!1.51e-08!235;DOID:14566!2.77e-08!239;DOID:178!4.71e-08!1;DOID:326!4.71e-08!1;DOID:3978!4.71e-08!1;DOID:3394!4.71e-08!1;DOID:5844!4.71e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.39e-11,106;DOID:0050687,1.77e-08,143;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.96e-60!9;UBERON:0001557!7.90e-28!19;UBERON:0008947!2.78e-16!38;UBERON:0003258!2.78e-16!38;UBERON:0000072!3.77e-13!46;UBERON:0000065!3.47e-11!53;UBERON:0001896!1.98e-09!3;UBERON:0005290!1.98e-09!3;UBERON:0010096!1.98e-09!3;UBERON:0000063!2.86e-09!97;UBERON:0001004!8.75e-08!72;UBERON:0004645!1.06e-07!1;UBERON:0001256!1.06e-07!1;UBERON:0001259!1.06e-07!1;UBERON:0004921!1.96e-07!129;UBERON:0004185!1.96e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.23e-78;9!UBERON:0001557;4.23e-78;9!UBERON:0000072;1.23e-19;37!UBERON:0000065;2.61e-13;44!UBERON:0001004;6.08e-09;65!UBERON:0002369;5.36e-08;3!UBERON:0001235;5.36e-08;3!UBERON:0006858;5.36e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.53e-78,9;UBERON:0001557,4.10e-37,19;UBERON:0008947,1.32e-18,38;UBERON:0003258,1.32e-18,38;UBERON:0000072,4.81e-15,47;UBERON:0000065,4.33e-13,54;UBERON:0001004,1.57e-09,74;UBERON:0001041,4.38e-08,87;UBERON:0002369,5.18e-08,3;UBERON:0001235,5.18e-08,3;UBERON:0006858,5.18e-08,3 | |||
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|short_description=p@chr2:233195304..233195346,+ | |||
}} | }} |
Latest revision as of 07:45, 29 July 2015
Short description: | p@chr2:233195304..233195346, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:233195304..233195346, + |
Coexpression cluster: | C655_mesothelioma_Mesothelial_hepatoma_cholangiocellular_Urothelial_glioma_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.23e-11 | 2 |
mesothelial cell | 3.35e-10 | 19 |
steroid hormone secreting cell | 5.18e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.53e-78 | 9 |
upper respiratory tract | 4.10e-37 | 19 |
respiratory primordium | 1.32e-18 | 38 |
endoderm of foregut | 1.32e-18 | 38 |
segment of respiratory tract | 4.81e-15 | 47 |
respiratory tract | 4.33e-13 | 54 |
respiratory system | 1.57e-09 | 74 |
foregut | 4.38e-08 | 87 |
adrenal gland | 5.18e-08 | 3 |
adrenal cortex | 5.18e-08 | 3 |
adrenal/interrenal gland | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.39e-11 | 106 |
cell type cancer | 1.77e-08 | 143 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |