FFCP PHASE1:Mm9::chr18:12662625..12662634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16774 | |EntrezGene=16774 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3128 | |MCL_coexpression_id=3128 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UU65,Q61789 | |UniProt=Q3UU65,Q61789 | ||
|association_with_transcript=-73bp_to_uc008ecg.1,uc008ech.1_5end | |association_with_transcript=-73bp_to_uc008ecg.1,uc008ech.1_5end | ||
|cluster_id=chr18:12662625..12662634,+ | |||
|description=CAGE_peak_6_at_Lama3_5end | |description=CAGE_peak_6_at_Lama3_5end | ||
|id=chr18:12662625..12662634,+ | |id=chr18:12662625..12662634,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.33e-18,3;CL:0002202,6.33e-18,3;CL:0000069,6.33e-18,3;CL:0002632,6.33e-18,3;CL:0002368,6.33e-18,3;CL:0000307,6.33e-18,3;CL:0000377,6.33e-18,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!2.32e-07!5;UBERON:0001003!2.32e-07!5;UBERON:0002097!2.32e-07!5;UBERON:0002199!2.32e-07!5;UBERON:0007029!2.32e-07!5;UBERON:0007376!2.32e-07!5;UBERON:0002416!2.32e-07!5;UBERON:0007383!2.32e-07!5;UBERON:0000072!3.98e-07!27 | |ontology_enrichment_uberon=UBERON:0000014!2.32e-07!5;UBERON:0001003!2.32e-07!5;UBERON:0002097!2.32e-07!5;UBERON:0002199!2.32e-07!5;UBERON:0007029!2.32e-07!5;UBERON:0007376!2.32e-07!5;UBERON:0002416!2.32e-07!5;UBERON:0007383!2.32e-07!5;UBERON:0000072!3.98e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.33e-18,3;UBERON:0001005,6.33e-18,3;UBERON:0007196,6.33e-18,3;UBERON:0001558,6.33e-18,3;UBERON:0000014,7.81e-18,5;UBERON:0001003,7.81e-18,5;UBERON:0002097,7.81e-18,5;UBERON:0002199,7.81e-18,5;UBERON:0007029,7.81e-18,5;UBERON:0007376,7.81e-18,5;UBERON:0002416,7.81e-18,5;UBERON:0007383,7.81e-18,5;UBERON:0001962,1.05e-12,2;UBERON:0001961,1.05e-12,2;UBERON:0001744,1.05e-12,2;UBERON:0001911,3.84e-12,2;UBERON:0000076,3.84e-12,2;UBERON:0005333,3.84e-12,2;UBERON:0008425,3.84e-12,2;UBERON:0005311,3.84e-12,2;UBERON:0002465,9.25e-09,3;UBERON:0003102,1.33e-08,22;UBERON:0003199,4.68e-07,1 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,2.2940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,2.78695852022608,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0,0.380451252225118,0,0.494096864172033,1.25667604400135,0.397912944082302,0.974820435595601,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,1.47529281905711,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4732937941222,1.45317984026315,1.62844897306021,1.07435109602823,0.820704498725306,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.410843828659309,0.649604114888975,0.537080087002444,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0,0.100826185136841,0.38983152295901,0.481059208201647,0.467507608726276,0.680191150845634,0,0,0,0,0.187682475451182,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.463537303779422,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,1.24905288968973,0.467863216890817,0.644613162144895,0,0.220591419119515,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,2.2940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,2.78695852022608,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0.175951124163949,0,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0,0.380451252225118,0,0.494096864172033,1.25667604400135,0.397912944082302,0.974820435595601,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,1.47529281905711,1.93155722413313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4732937941222,1.45317984026315,1.62844897306021,1.07435109602823,0.820704498725306,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.410843828659309,0.649604114888975,0.537080087002444,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0,0.100826185136841,0.38983152295901,0.481059208201647,0.467507608726276,0.680191150845634,0,0,0,0,0.187682475451182,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.463537303779422,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,1.24905288968973,0.467863216890817,0.644613162144895,0,0.220591419119515,0 | ||
|short_description=p6@Lama3 | |short_description=p6@Lama3 | ||
}} | }} |
Latest revision as of 01:34, 27 September 2015
Short description: | p6@Lama3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lama3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3128 |
Association with transcript: | -73bp_to_uc008ecg.1, uc008ech.1_5end |
EntrezGene: | Lama3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.33e-18 | 3 |
epithelial cell of tracheobronchial tree | 6.33e-18 | 3 |
branched duct epithelial cell | 6.33e-18 | 3 |
epithelial cell of lower respiratory tract | 6.33e-18 | 3 |
respiratory epithelial cell | 6.33e-18 | 3 |
tracheal epithelial cell | 6.33e-18 | 3 |
tracheoblast | 6.33e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.33e-18 | 3 |
respiratory airway | 6.33e-18 | 3 |
tracheobronchial tree | 6.33e-18 | 3 |
lower respiratory tract | 6.33e-18 | 3 |
zone of skin | 7.81e-18 | 5 |
skin epidermis | 7.81e-18 | 5 |
skin of body | 7.81e-18 | 5 |
integument | 7.81e-18 | 5 |
surface | 7.81e-18 | 5 |
outer epithelium | 7.81e-18 | 5 |
integumental system | 7.81e-18 | 5 |
enveloping layer of ectoderm | 7.81e-18 | 5 |
gut-associated lymphoid tissue | 1.05e-12 | 2 |
mucosa-associated lymphoid tissue | 1.05e-12 | 2 |
lymphoid tissue | 1.05e-12 | 2 |
mammary gland | 3.84e-12 | 2 |
external ectoderm | 3.84e-12 | 2 |
mammary bud | 3.84e-12 | 2 |
mammary ridge | 3.84e-12 | 2 |
mammary placode | 3.84e-12 | 2 |
lymphoid system | 9.25e-09 | 3 |
surface structure | 1.33e-08 | 22 |
egg chamber | 4.68e-07 | 1 |