FFCP PHASE1:Mm9::chr1:134921907..134921968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17248 | |EntrezGene=17248 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=862 | |MCL_coexpression_id=862 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UTC9,O35618,E9QPT0 | |UniProt=Q3UTC9,O35618,E9QPT0 | ||
|association_with_transcript=0bp_to_ENSMUST00000067398,ENSMUST00000067429,ENSMUST00000112313,NM_008575,uc007cpk.1,uc007cpl.1,uc007cpm.1,uc007cpn.1,uc007cpo.1_5end | |association_with_transcript=0bp_to_ENSMUST00000067398,ENSMUST00000067429,ENSMUST00000112313,NM_008575,uc007cpk.1,uc007cpl.1,uc007cpm.1,uc007cpn.1,uc007cpo.1_5end | ||
|cluster_id=chr1:134921907..134921968,- | |||
|description=CAGE_peak_1_at_Mdm4_5end | |description=CAGE_peak_1_at_Mdm4_5end | ||
|id=chr1:134921907..134921968,- | |id=chr1:134921907..134921968,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.21e-08!29;UBERON:0001004!1.15e-07!42;UBERON:0003408!1.42e-07!24;UBERON:0000065!1.81e-07!41;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23;UBERON:0006562!4.44e-07!24;UBERON:0001557!4.44e-07!24;UBERON:0001042!4.44e-07!24;UBERON:0008814!4.44e-07!24;UBERON:0009145!4.44e-07!24 | |ontology_enrichment_uberon=UBERON:0004177!3.21e-08!29;UBERON:0001004!1.15e-07!42;UBERON:0003408!1.42e-07!24;UBERON:0000065!1.81e-07!41;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23;UBERON:0006562!4.44e-07!24;UBERON:0001557!4.44e-07!24;UBERON:0001042!4.44e-07!24;UBERON:0008814!4.44e-07!24;UBERON:0009145!4.44e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.21e-08,29;UBERON:0005057,3.21e-08,29;UBERON:0000077,9.41e-08,35;UBERON:0001004,1.15e-07,42;UBERON:0003408,1.42e-07,24;UBERON:0000065,1.81e-07,41;UBERON:0002370,2.16e-07,23;UBERON:0000974,2.16e-07,23;UBERON:0004807,2.16e-07,23;UBERON:0005058,2.16e-07,23;UBERON:0003351,2.16e-07,23;UBERON:0009113,2.16e-07,23;UBERON:0003295,2.16e-07,23;UBERON:0009722,2.16e-07,23;UBERON:0005562,2.16e-07,23;UBERON:0007690,2.16e-07,23;UBERON:0007811,2.19e-07,36;UBERON:0000153,2.57e-07,43;UBERON:0006562,4.44e-07,24;UBERON:0001557,4.44e-07,24;UBERON:0001042,4.44e-07,24;UBERON:0008814,4.44e-07,24;UBERON:0009145,4.44e-07,24 | |||
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|phase1_expression=50.2867379909053,48.8565570695106,41.8599300238373,68.6593759666504,60.1074875935617,60.7722964321041,47.4233660408917,130.414556675992,65.7483332448284,70.219357896598,72.2539825911631,68.3647402590033,167.091912412857,147.303378076011,50.6326837959807,60.1351544147783,41.2741508095607,112.304530867533,122.443189209925,117.131543896256,71.1812338564454,58.6809521597232,55.6355550865932,36.3182799741033,31.6584807872695,34.4539178469012,42.2146756235893,36.845580789287,23.372880593134,29.9915854414318,27.7163138319131,66.6782207132613,67.0420618467181,31.6963362030877,61.8142466267728,39.7300802406797,59.209113316087,88.7287057162244,63.2881629064278,88.4755127315719,123.528612486513,129.778642142105,94.674518841075,48.7220685565484,47.5457807419523,54.1462918876961,27.3836970521814,11.9913836009246,7.24964403023757,14.5822424305713,13.4386964760348,7.18762821824858,102.347389695219,103.001424165611,90.4092319693228,28.0412785279182,38.3954809517934,32.4873418134789,31.5613678940973,26.4495489636016,39.2975470173831,16.2645375393183,12.450127145556,9.89889689009539,7.9109309005358,14.209602298922,15.8788058574755,10.373894243682,42.5127410464758,31.4563836312839,34.0726437389239,20.8525218614777,24.0746709637259,45.444086508748,32.2999237331457,45.960939330501,42.9451935897616,47.1166277534343,56.9880238380663,34.9498662485014,30.0994347451928,51.5704236851192,32.943593882163,36.0168070420275,47.5202550585879,37.7124589406295,47.1250263445031,40.0758808524396,21.6576912932906,27.5836194389767,55.9438463194238,32.6961073252927,24.478968013479,29.6836755400799,35.7377029596218,46.5947962581229,30.8977724289854,26.587130322177,24.1600984280668,27.5604868118065,42.1121825132275,73.1460921261612,50.9610479413291,28.4426681261332,22.9480503471887,21.5355885653834,21.7375511356357,39.6218062625138,227.08852395857,55.6658021493093,33.4826680658642,29.2286859179656,32.9780161076164,44.0110110413658,59.6174745178023,34.5583126156608,58.5852073530466,64.7805119001204,38.0382537338446,52.0889256830658,62.0564666873706,58.1850303762267,41.0061874679869,75.8302264259907,95.9265917205624,40.3622147229574,48.6449405494036,22.1964010467561,44.6016497026457,58.5681400072857,65.8800868058822,45.2355667606312,52.3211203778752,54.9788233260211,46.1289458922223,57.9201309151895,47.660822281948,71.9072290126338,49.7863834114339,64.816091613034,43.1999870636176,45.2907145733942,39.7937306869822,68.2692824795789,79.4666310087509,81.7365535417342,64.5604882216532,80.1980449290949,29.5328150317994,58.8119909321918,59.2955288432508,40.1128190342462,63.9508673218875,66.5161638057338,63.1751158772386,55.5305604423596,30.8973802417823,23.4186595474391,26.7113689431857,35.2113813310353,41.9801647366162,40.1538397058063,49.9531392084794,49.5845864003458,50.5996130270601,51.6225357345905,48.2892122519315,47.6402596858052,44.9248390263802,62.8761387422935,53.9918271575399,53.9477953599476,47.642375018158,55.8298702043147,64.7693041577512,52.0697338639179,62.118731200954,27.7673094996721,52.2556213811323,44.3572043253438,51.9335869128036,50.4208811558356,45.8098770320433,40.5180583619751,37.9623249235609,32.7750919900782,54.5397403096585,43.1735544329297,52.0554112608051,44.0421510240569,52.7376841694254,62.7295010751257,20.863469104839,48.2128723213056,65.3704866903866,44.8032921259691,47.7123118432359,57.020421570829,61.1497313991568,60.3725505236573,53.5365661939088,42.695418716943,40.6140099109394,44.8813334376293,43.2429789249047,44.522698252201,51.7293309540682,51.6119121870172,41.7586396921528,43.4421167550724,54.1531657428618,47.4991244815381,63.258010872036,54.3325783596015,48.989914678986,43.9487247627974,40.3644180424302,42.9374734013397,73.9012760666419,39.0352308247199,54.5932671080787,45.8311731593008,59.846013313568,73.8702595318407,58.5587356579594,62.6379009623534,82.2855452234317,71.9760241358519,73.8275578884165,85.8643769110467,78.0536118033848,83.0285596257877,42.2215595029962,40.2490206025845,42.7834917526562,53.2557920368134,61.3303253753365,62.4738289536443,32.1312492938284,52.2614819313052,49.5347904483523,44.5100168498168,61.6110917515805,66.4333258308095,61.4924340467408,76.7137398437736,64.3649015663082,67.511103177513,64.8271955832299,58.4804795887689,70.5442223485095,31.6956774527714,47.0743312531835,77.8658980430367,57.080409486184,28.4053344301328,35.0695326079111,43.7563785033684,24.5100571091041,40.2740043806545,50.6519454609713,66.5266724943835,64.1695281092498,74.9007116307884,50.6009321159994,42.2855727317566,54.8107765263599,40.8738683451074,21.3441828241545,39.0093403757498,48.0592033170561,32.6414936211789,47.0610198922066,23.7482660309387,45.2916396562961,47.6622159443595,57.3373834942901,66.284273682475,79.4404979343855,72.4961357636433,62.1929912256341,69.2674596924159,57.7132056527104,59.5215219453736,69.8861902463217,39.007118045049,54.0768019919558,73.2753297748248,84.0669500484305,71.3787900404351,58.1326230578985,52.9016489783427,54.7271896265518,30.5494597764836,37.6439832361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| ||
|short_description=p1@Mdm4 | |short_description=p1@Mdm4 | ||
}} | }} |
Latest revision as of 09:16, 26 September 2015
Short description: | p1@Mdm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mdm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:862 |
Association with transcript: | 0bp_to_ENSMUST00000067398, ENSMUST00000067429, ENSMUST00000112313, NM_008575, uc007cpk.1, uc007cpl.1, uc007cpm.1, uc007cpn.1, uc007cpo.1_5end |
EntrezGene: | Mdm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.21e-08 | 29 |
immune organ | 3.21e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 9.41e-08 | 35 |
respiratory system | 1.15e-07 | 42 |
gland of gut | 1.42e-07 | 24 |
respiratory tract | 1.81e-07 | 41 |
thymus | 2.16e-07 | 23 |
neck | 2.16e-07 | 23 |
respiratory system epithelium | 2.16e-07 | 23 |
hemolymphoid system gland | 2.16e-07 | 23 |
pharyngeal epithelium | 2.16e-07 | 23 |
thymic region | 2.16e-07 | 23 |
pharyngeal gland | 2.16e-07 | 23 |
entire pharyngeal arch endoderm | 2.16e-07 | 23 |
thymus primordium | 2.16e-07 | 23 |
early pharyngeal endoderm | 2.16e-07 | 23 |
craniocervical region | 2.19e-07 | 36 |
anterior region of body | 2.57e-07 | 43 |
pharynx | 4.44e-07 | 24 |
upper respiratory tract | 4.44e-07 | 24 |
chordate pharynx | 4.44e-07 | 24 |
pharyngeal arch system | 4.44e-07 | 24 |
pharyngeal region of foregut | 4.44e-07 | 24 |