FFCP PHASE1:Hg19::chr2:219849723..219849743,-: Difference between revisions
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|id=chr2:219849723..219849743,-
|short_description=p@chr2:219849723..219849743,-
|description=CAGE_peak_at_chr2:219849723..219849743,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:219849723..219849743,- | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_at_chr2:219849723..219849743,- | |||
|id=chr2:219849723..219849743,- | |||
|ontology_enrichment_celltype=CL:0000242!5.58e-25!2;CL:0002553!2.06e-13!1;CL:0000312!1.40e-10!5;CL:0000240!5.79e-09!6;CL:0000311!5.79e-09!6;CL:0000079!5.79e-09!6;CL:0000237!5.79e-09!6;CL:0000036!5.79e-09!6;CL:0000357!5.79e-09!6;CL:0000114!5.79e-09!6;CL:0002535!2.58e-07!2;CL:0000362!6.24e-07!8;CL:0000333!9.60e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.77e-57;2!CL:0000242;4.77e-57;2!CL:0002553;1.33e-29;1!CL:0000312;1.44e-23;5!CL:0000240;7.84e-20;6!CL:0000311;7.84e-20;6!CL:0000079;7.84e-20;6!CL:0000237;7.84e-20;6!CL:0002535;1.78e-15;2!CL:0000362;1.40e-13;9!CL:0002159;4.38e-09;14!CL:0000095;6.19e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.58e-57,2;CL:0002553,1.33e-29,1;CL:0000312,1.28e-23,5;CL:0000240,7.13e-20,6;CL:0000311,7.13e-20,6;CL:0000079,7.13e-20,6;CL:0000237,7.13e-20,6;CL:0000036,7.13e-20,6;CL:0000357,7.13e-20,6;CL:0000114,7.13e-20,6;CL:0002535,1.78e-15,2;CL:0000362,1.31e-13,9;CL:0002159,4.21e-09,14;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000357;7.84e-20;6!CL:0000114;7.84e-20;6 | |||
|ontology_enrichment_disease=DOID:169!6.69e-18!6;DOID:171!5.49e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.70e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.13e-07,106;DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.42e-21!5;UBERON:0002410!2.42e-21!5;UBERON:0000988!4.11e-16!3;UBERON:0001154!5.38e-13!1;UBERON:0001153!5.38e-13!1;UBERON:0000010!3.83e-12!8;UBERON:0000160!2.12e-10!27;UBERON:0005409!4.56e-08!35;UBERON:0002108!1.31e-07!14;UBERON:0006955!2.58e-07!2;UBERON:0004801!2.58e-07!2;UBERON:0001873!4.17e-07!2;UBERON:0010122!4.17e-07!2;UBERON:0002148!5.28e-07!2;UBERON:0009662!5.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.78e-15;2!UBERON:0004801;1.78e-15;2!UBERON:0002114;1.09e-10;2!UBERON:0001003;1.53e-08;15!UBERON:0007376;1.53e-08;15!UBERON:0002108;6.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0002114,1.20e-10,2;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0002108,6.77e-07,4 | |||
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|short_description=p@chr2:219849723..219849743,- | |||
}} | }} |
Latest revision as of 06:47, 29 July 2015
Short description: | p@chr2:219849723..219849743, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:219849723..219849743, - |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.58e-57 | 2 |
lung fibroblast | 1.33e-29 | 1 |
keratinocyte | 1.28e-23 | 5 |
stratified squamous epithelial cell | 7.13e-20 | 6 |
keratin accumulating cell | 7.13e-20 | 6 |
stratified epithelial cell | 7.13e-20 | 6 |
keratinizing barrier epithelial cell | 7.13e-20 | 6 |
epithelial fate stem cell | 7.13e-20 | 6 |
stratified epithelial stem cell | 7.13e-20 | 6 |
surface ectodermal cell | 7.13e-20 | 6 |
epithelial cell of cervix | 1.78e-15 | 2 |
epidermal cell | 1.31e-13 | 9 |
general ecto-epithelial cell | 4.21e-09 | 14 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
duodenum | 1.20e-10 | 2 |
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
small intestine | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.13e-07 | 106 |
cervical cancer | 5.70e-07 | 5 |