FFCP PHASE1:Mm9::chr16:16600190..16600203,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224014 | |EntrezGene=224014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BMP1 | |UniProt=Q8BMP1 | ||
|association_with_transcript=-58bp_to_ENSMUST00000162414,uc007yir.1,uc007yix.1_5end | |association_with_transcript=-58bp_to_ENSMUST00000162414,uc007yir.1,uc007yix.1_5end | ||
|cluster_id=chr16:16600190..16600203,- | |||
|description=CAGE_peak_7_at_Fgd4_5end | |description=CAGE_peak_7_at_Fgd4_5end | ||
|id=chr16:16600190..16600203,- | |id=chr16:16600190..16600203,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.55e-14,9;CL:0002251,2.55e-14,9;CL:0000239,1.57e-13,6;CL:0000677,1.57e-13,6;CL:0000584,1.57e-13,6;CL:0000075,1.85e-11,7;CL:0000066,1.14e-09,25;CL:0002076,5.93e-08,15;CL:0000682,4.09e-07,3;CL:0000223,6.13e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.15e-14!43;UBERON:0005409!1.53e-12!59;UBERON:0000344!2.90e-10!15;UBERON:0001242!2.97e-09!13;UBERON:0000060!2.97e-09!13;UBERON:0001262!2.97e-09!13;UBERON:0004786!2.97e-09!13;UBERON:0004119!9.60e-09!130;UBERON:0000925!9.60e-09!130;UBERON:0006595!9.60e-09!130;UBERON:0001007!1.20e-08!128;UBERON:0001555!1.20e-08!128;UBERON:0007026!1.20e-08!128;UBERON:0004921!6.19e-08!126;UBERON:0004185!6.19e-08!126 | |ontology_enrichment_uberon=UBERON:0000160!1.15e-14!43;UBERON:0005409!1.53e-12!59;UBERON:0000344!2.90e-10!15;UBERON:0001242!2.97e-09!13;UBERON:0000060!2.97e-09!13;UBERON:0001262!2.97e-09!13;UBERON:0004786!2.97e-09!13;UBERON:0004119!9.60e-09!130;UBERON:0000925!9.60e-09!130;UBERON:0006595!9.60e-09!130;UBERON:0001007!1.20e-08!128;UBERON:0001555!1.20e-08!128;UBERON:0007026!1.20e-08!128;UBERON:0004921!6.19e-08!126;UBERON:0004185!6.19e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.45e-43,31;UBERON:0005409,1.52e-30,47;UBERON:0000344,1.01e-24,15;UBERON:0001242,7.59e-22,13;UBERON:0001262,7.59e-22,13;UBERON:0004786,7.59e-22,13;UBERON:0004923,6.73e-19,24;UBERON:0003350,2.55e-14,9;UBERON:0004808,2.55e-14,9;UBERON:0001277,2.55e-14,9;UBERON:0004119,5.27e-12,118;UBERON:0000925,5.27e-12,118;UBERON:0006595,5.27e-12,118;UBERON:0000485,2.02e-11,11;UBERON:0001007,2.52e-11,116;UBERON:0001555,2.52e-11,116;UBERON:0007026,2.52e-11,116;UBERON:0004921,7.08e-10,114;UBERON:0002108,7.32e-09,4;UBERON:0000331,4.49e-07,3;UBERON:0002116,4.49e-07,3;UBERON:0001204,4.49e-07,3;UBERON:0001168,4.49e-07,3 | |||
|phase1_expression=0.160148847104794,12.9120900826564,10.9199817453489,12.0985684522732,16.0286633582831,3.69334398206158,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.43993180514066,1.14704640533585,5.7423196411502,3.01533397311352,3.01659725760245,3.99049180858385,3.2763916868791,2.21730510655305,0,0,0,1.44425809875637,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.869593466105033,0,1.3599426674155,0,0,0.448026887097336,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0,0.91347103775248,0,0,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0,3.70792451601561,0,0,0.161766849947409,0,0.484875253135222,3.72783522436244,0,0,3.32094171771169,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0,0.203678727700633,0.124406970610093,1.0108910337347,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.154267112887378,0.465067889500816,0,0.350296027101508,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,6.27795687669216,4.49565963328025,0.426576501070468,0.232236671860439,0.77320476793256,1.81515172161008,1.77902435075896,1.14135375667535,1.89811624617805,1.97638745668813,2.01068167040216,1.98956472041151,2.14460495831032,4.49409704327111,3.24207074812041,2.19055400579804,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,1.05203729835478,1.01178459398812,0.738050739898011,1.255989822731,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.189491411770485,0.651859905768103,0.848725428875941,0.469380496577004,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0,0.395287777946524,0,0.851640511249612,0.35613120733451,0.162886959353576,0,0,0,0,0.377210159511796,0.885905678642318,1.53717573971964,0.516856586336442,0,0,0.316036757935816,2.10837217149998,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0,0,2.33015277950202,0.220528398054962,0.32977250588296,0,0.361877549568935,0.238744688006273,0.164140899745061,3.20628920292836,0.370850604021019,0,0.619160603889667,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0.134864346384821,0.743881101528023,1.04702376793612,3.24037433229482,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.337912250981556,0.821500670520278,0.651021924219751,0.314578033277133,0.966336483304024,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.738447635872886,0.302899349844443,0.228620419965,0.403304740547362,0.194915761479505,0.288635524920988,0.233753804363138,0.453460767230423,0.443971906748129,0.717710852875806,1.17519231454855,0.386379188064381,0.563047426353546,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0,0,0.187283014939765,0.576226371643824,0.287177344778066,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.436039249896986,0.564656282491984,0.338458431566706,0.73171189149109,0,0.135804113845862,0,0,0.0985044823755635,1.22769312950907,0.929621047115796,0,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,12.9120900826564,10.9199817453489,12.0985684522732,16.0286633582831,3.69334398206158,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.43993180514066,1.14704640533585,5.7423196411502,3.01533397311352,3.01659725760245,3.99049180858385,3.2763916868791,2.21730510655305,0,0,0,1.44425809875637,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.869593466105033,0,1.3599426674155,0,0,0.448026887097336,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0,0.91347103775248,0,0,0,0,0.230615497256059,0.301445281105245,0.470354828542819,0,3.70792451601561,0,0,0.161766849947409,0,0.484875253135222,3.72783522436244,0,0,3.32094171771169,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0,0.203678727700633,0.124406970610093,1.0108910337347,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.154267112887378,0.465067889500816,0,0.350296027101508,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,6.27795687669216,4.49565963328025,0.426576501070468,0.232236671860439,0.77320476793256,1.81515172161008,1.77902435075896,1.14135375667535,1.89811624617805,1.97638745668813,2.01068167040216,1.98956472041151,2.14460495831032,4.49409704327111,3.24207074812041,2.19055400579804,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,1.05203729835478,1.01178459398812,0.738050739898011,1.255989822731,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.189491411770485,0.651859905768103,0.848725428875941,0.469380496577004,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0,0.395287777946524,0,0.851640511249612,0.35613120733451,0.162886959353576,0,0,0,0,0.377210159511796,0.885905678642318,1.53717573971964,0.516856586336442,0,0,0.316036757935816,2.10837217149998,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0,0,2.33015277950202,0.220528398054962,0.32977250588296,0,0.361877549568935,0.238744688006273,0.164140899745061,3.20628920292836,0.370850604021019,0,0.619160603889667,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0.134864346384821,0.743881101528023,1.04702376793612,3.24037433229482,0,0,0.448549638131936,0.496375471371293,0,0.258319646955462,0.337912250981556,0.821500670520278,0.651021924219751,0.314578033277133,0.966336483304024,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.738447635872886,0.302899349844443,0.228620419965,0.403304740547362,0.194915761479505,0.288635524920988,0.233753804363138,0.453460767230423,0.443971906748129,0.717710852875806,1.17519231454855,0.386379188064381,0.563047426353546,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0,0,0.187283014939765,0.576226371643824,0.287177344778066,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.436039249896986,0.564656282491984,0.338458431566706,0.73171189149109,0,0.135804113845862,0,0,0.0985044823755635,1.22769312950907,0.929621047115796,0,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p7@Fgd4 | |short_description=p7@Fgd4 | ||
}} | }} |
Latest revision as of 16:14, 1 October 2015
Short description: | p7@Fgd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fgd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -58bp_to_ENSMUST00000162414, uc007yir.1, uc007yix.1_5end |
EntrezGene: | Fgd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.55e-14 | 9 |
epithelial cell of alimentary canal | 2.55e-14 | 9 |
brush border epithelial cell | 1.57e-13 | 6 |
gut absorptive cell | 1.57e-13 | 6 |
enterocyte | 1.57e-13 | 6 |
columnar/cuboidal epithelial cell | 1.85e-11 | 7 |
epithelial cell | 1.14e-09 | 25 |
endo-epithelial cell | 5.93e-08 | 15 |
M cell of gut | 4.09e-07 | 3 |
endodermal cell | 6.13e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.45e-43 | 31 |
gastrointestinal system | 1.52e-30 | 47 |
mucosa | 1.01e-24 | 15 |
intestinal mucosa | 7.59e-22 | 13 |
wall of intestine | 7.59e-22 | 13 |
gastrointestinal system mucosa | 7.59e-22 | 13 |
organ component layer | 6.73e-19 | 24 |
epithelium of mucosa | 2.55e-14 | 9 |
gastrointestinal system epithelium | 2.55e-14 | 9 |
intestinal epithelium | 2.55e-14 | 9 |
endoderm-derived structure | 5.27e-12 | 118 |
endoderm | 5.27e-12 | 118 |
presumptive endoderm | 5.27e-12 | 118 |
simple columnar epithelium | 2.02e-11 | 11 |
digestive system | 2.52e-11 | 116 |
digestive tract | 2.52e-11 | 116 |
primitive gut | 2.52e-11 | 116 |
subdivision of digestive tract | 7.08e-10 | 114 |
small intestine | 7.32e-09 | 4 |
ileal mucosa | 4.49e-07 | 3 |
ileum | 4.49e-07 | 3 |
mucosa of small intestine | 4.49e-07 | 3 |
wall of small intestine | 4.49e-07 | 3 |