FFCP PHASE1:Mm9::chr15:101980813..101980824,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=223920 | |EntrezGene=223920 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=O88908 | |UniProt=O88908 | ||
|association_with_transcript=-132bp_to_ENSMUST00000023806_5end | |association_with_transcript=-132bp_to_ENSMUST00000023806_5end | ||
|cluster_id=chr15:101980813..101980824,+ | |||
|description=CAGE_peak_3_at_Soat2_5end | |description=CAGE_peak_3_at_Soat2_5end | ||
|id=chr15:101980813..101980824,+ | |id=chr15:101980813..101980824,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.58e-12!9;CL:0002251!8.58e-12!9;CL:0000239!5.68e-09!6;CL:0000677!5.68e-09!6;CL:0000212!5.68e-09!6;CL:0000584!5.68e-09!6;CL:0000066!1.02e-07!25;CL:0000075!1.72e-07!7 | |ontology_enrichment_celltype=CL:0002563!8.58e-12!9;CL:0002251!8.58e-12!9;CL:0000239!5.68e-09!6;CL:0000677!5.68e-09!6;CL:0000212!5.68e-09!6;CL:0000584!5.68e-09!6;CL:0000066!1.02e-07!25;CL:0000075!1.72e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.52e-18,6;CL:0000677,6.52e-18,6;CL:0000584,6.52e-18,6;CL:0002563,2.36e-15,9;CL:0002251,2.36e-15,9;CL:0000075,2.95e-15,7;CL:0000066,4.18e-10,25;CL:0000682,1.06e-09,3;CL:0002076,8.27e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.96e-20!43;UBERON:0000344!3.57e-19!15;UBERON:0001242!1.01e-16!13;UBERON:0000060!1.01e-16!13;UBERON:0001262!1.01e-16!13;UBERON:0004786!1.01e-16!13;UBERON:0005409!7.63e-16!59;UBERON:0004923!8.75e-13!24;UBERON:0001007!3.70e-12!128;UBERON:0001555!3.70e-12!128;UBERON:0007026!3.70e-12!128;UBERON:0003350!8.58e-12!9;UBERON:0004808!8.58e-12!9;UBERON:0001277!8.58e-12!9;UBERON:0004119!9.52e-12!130;UBERON:0000925!9.52e-12!130;UBERON:0006595!9.52e-12!130;UBERON:0004921!8.60e-11!126;UBERON:0004185!8.60e-11!126;UBERON:0000485!3.54e-09!11;UBERON:0003929!6.80e-07!55 | |ontology_enrichment_uberon=UBERON:0000160!7.96e-20!43;UBERON:0000344!3.57e-19!15;UBERON:0001242!1.01e-16!13;UBERON:0000060!1.01e-16!13;UBERON:0001262!1.01e-16!13;UBERON:0004786!1.01e-16!13;UBERON:0005409!7.63e-16!59;UBERON:0004923!8.75e-13!24;UBERON:0001007!3.70e-12!128;UBERON:0001555!3.70e-12!128;UBERON:0007026!3.70e-12!128;UBERON:0003350!8.58e-12!9;UBERON:0004808!8.58e-12!9;UBERON:0001277!8.58e-12!9;UBERON:0004119!9.52e-12!130;UBERON:0000925!9.52e-12!130;UBERON:0006595!9.52e-12!130;UBERON:0004921!8.60e-11!126;UBERON:0004185!8.60e-11!126;UBERON:0000485!3.54e-09!11;UBERON:0003929!6.80e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-44,31;UBERON:0000344,4.50e-31,15;UBERON:0005409,1.07e-27,47;UBERON:0001242,8.71e-26,13;UBERON:0001262,8.71e-26,13;UBERON:0004786,8.71e-26,13;UBERON:0004923,2.30e-18,24;UBERON:0003350,2.36e-15,9;UBERON:0004808,2.36e-15,9;UBERON:0001277,2.36e-15,9;UBERON:0001007,6.67e-14,116;UBERON:0001555,6.67e-14,116;UBERON:0007026,6.67e-14,116;UBERON:0004119,1.43e-13,118;UBERON:0000925,1.43e-13,118;UBERON:0006595,1.43e-13,118;UBERON:0000485,2.22e-12,11;UBERON:0002108,2.78e-12,4;UBERON:0004921,1.18e-11,114;UBERON:0000331,9.31e-10,3;UBERON:0002116,9.31e-10,3;UBERON:0001204,9.31e-10,3;UBERON:0001168,9.31e-10,3;UBERON:0001962,7.07e-07,2;UBERON:0001961,7.07e-07,2;UBERON:0001744,7.07e-07,2 | |||
|phase1_expression=0,16.0528687514106,8.64498554840118,25.4069937497737,22.5403078475856,3.52546471014969,6.30754129607919,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.198581902401771,0.261199789138935,6.71968175732308,9.63518980482114,7.46501553349526,10.3382879078178,8.83432054012145,18.4322716872683,14.1136872665561,5.32153225572731,0.635030673459631,0,0,1.1554064790051,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,7.59963200862735,8.19796756656987,0,0,0,1.21010114774006,0.444756087689741,1.33157938278791,6.16887780007865,0.658795818896044,1.75934646160189,1.1937388322469,1.55971269695296,8.08937467788799,6.05186539649144,7.96565093017469,0,0,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,1.37280706594041,2.87536413054709,0.744281895337007,0.312037673114561,1.01031551178845,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28702091574627,0,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.432021363287205,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.70990322463735,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,16.0528687514106,8.64498554840118,25.4069937497737,22.5403078475856,3.52546471014969,6.30754129607919,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.198581902401771,0.261199789138935,6.71968175732308,9.63518980482114,7.46501553349526,10.3382879078178,8.83432054012145,18.4322716872683,14.1136872665561,5.32153225572731,0.635030673459631,0,0,1.1554064790051,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2619386500124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,7.59963200862735,8.19796756656987,0,0,0,1.21010114774006,0.444756087689741,1.33157938278791,6.16887780007865,0.658795818896044,1.75934646160189,1.1937388322469,1.55971269695296,8.08937467788799,6.05186539649144,7.96565093017469,0,0,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0.482354319504834,0,0,0.162135226775035,1.37280706594041,2.87536413054709,0.744281895337007,0.312037673114561,1.01031551178845,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28702091574627,0,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0.432021363287205,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0.70990322463735,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p3@Soat2 | |short_description=p3@Soat2 | ||
}} | }} |
Latest revision as of 14:00, 26 September 2015
Short description: | p3@Soat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Soat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -132bp_to_ENSMUST00000023806_5end |
EntrezGene: | Soat2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.52e-18 | 6 |
gut absorptive cell | 6.52e-18 | 6 |
enterocyte | 6.52e-18 | 6 |
intestinal epithelial cell | 2.36e-15 | 9 |
epithelial cell of alimentary canal | 2.36e-15 | 9 |
columnar/cuboidal epithelial cell | 2.95e-15 | 7 |
epithelial cell | 4.18e-10 | 25 |
M cell of gut | 1.06e-09 | 3 |
endo-epithelial cell | 8.27e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.69e-44 | 31 |
mucosa | 4.50e-31 | 15 |
gastrointestinal system | 1.07e-27 | 47 |
intestinal mucosa | 8.71e-26 | 13 |
wall of intestine | 8.71e-26 | 13 |
gastrointestinal system mucosa | 8.71e-26 | 13 |
organ component layer | 2.30e-18 | 24 |
epithelium of mucosa | 2.36e-15 | 9 |
gastrointestinal system epithelium | 2.36e-15 | 9 |
intestinal epithelium | 2.36e-15 | 9 |
digestive system | 6.67e-14 | 116 |
digestive tract | 6.67e-14 | 116 |
primitive gut | 6.67e-14 | 116 |
endoderm-derived structure | 1.43e-13 | 118 |
endoderm | 1.43e-13 | 118 |
presumptive endoderm | 1.43e-13 | 118 |
simple columnar epithelium | 2.22e-12 | 11 |
small intestine | 2.78e-12 | 4 |
subdivision of digestive tract | 1.18e-11 | 114 |
ileal mucosa | 9.31e-10 | 3 |
ileum | 9.31e-10 | 3 |
mucosa of small intestine | 9.31e-10 | 3 |
wall of small intestine | 9.31e-10 | 3 |
gut-associated lymphoid tissue | 7.07e-07 | 2 |
mucosa-associated lymphoid tissue | 7.07e-07 | 2 |
lymphoid tissue | 7.07e-07 | 2 |