FFCP PHASE1:Mm9::chr11:115836424..115836427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192897 | |EntrezGene=192897 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=A2A863 | |UniProt=A2A863 | ||
|association_with_transcript=131bp_to_ENSMUST00000106460_5end | |association_with_transcript=131bp_to_ENSMUST00000106460_5end | ||
|cluster_id=chr11:115836424..115836427,+ | |||
|description=CAGE_peak_5_at_Itgb4_5end | |description=CAGE_peak_5_at_Itgb4_5end | ||
|id=chr11:115836424..115836427,+ | |id=chr11:115836424..115836427,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.08e-07!9;CL:0002251!1.08e-07!9 | |ontology_enrichment_celltype=CL:0002563!1.08e-07!9;CL:0002251!1.08e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.35e-14,6;CL:0000677,3.35e-14,6;CL:0000584,3.35e-14,6;CL:0000075,4.61e-12,7;CL:0000066,7.44e-11,25;CL:0002076,8.47e-11,15;CL:0002563,3.29e-09,9;CL:0002251,3.29e-09,9;CL:0000682,6.97e-08,3;CL:0000223,1.10e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.62e-18!43;UBERON:0005409!8.23e-18!59;UBERON:0000344!1.45e-12!15;UBERON:0001242!5.55e-11!13;UBERON:0000060!5.55e-11!13;UBERON:0001262!5.55e-11!13;UBERON:0004786!5.55e-11!13;UBERON:0004119!1.09e-09!130;UBERON:0000925!1.09e-09!130;UBERON:0006595!1.09e-09!130;UBERON:0004923!2.49e-09!24;UBERON:0001007!4.47e-09!128;UBERON:0001555!4.47e-09!128;UBERON:0007026!4.47e-09!128;UBERON:0000485!3.24e-08!11;UBERON:0004921!3.77e-08!126;UBERON:0004185!3.77e-08!126;UBERON:0003350!1.08e-07!9;UBERON:0004808!1.08e-07!9;UBERON:0001277!1.08e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!2.62e-18!43;UBERON:0005409!8.23e-18!59;UBERON:0000344!1.45e-12!15;UBERON:0001242!5.55e-11!13;UBERON:0000060!5.55e-11!13;UBERON:0001262!5.55e-11!13;UBERON:0004786!5.55e-11!13;UBERON:0004119!1.09e-09!130;UBERON:0000925!1.09e-09!130;UBERON:0006595!1.09e-09!130;UBERON:0004923!2.49e-09!24;UBERON:0001007!4.47e-09!128;UBERON:0001555!4.47e-09!128;UBERON:0007026!4.47e-09!128;UBERON:0000485!3.24e-08!11;UBERON:0004921!3.77e-08!126;UBERON:0004185!3.77e-08!126;UBERON:0003350!1.08e-07!9;UBERON:0004808!1.08e-07!9;UBERON:0001277!1.08e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.44e-24,31;UBERON:0000344,4.02e-21,15;UBERON:0005409,1.01e-17,47;UBERON:0001242,3.97e-17,13;UBERON:0001262,3.97e-17,13;UBERON:0004786,3.97e-17,13;UBERON:0004923,2.23e-14,24;UBERON:0001007,1.81e-10,116;UBERON:0001555,1.81e-10,116;UBERON:0007026,1.81e-10,116;UBERON:0004119,3.54e-10,118;UBERON:0000925,3.54e-10,118;UBERON:0006595,3.54e-10,118;UBERON:0002108,1.58e-09,4;UBERON:0003350,3.29e-09,9;UBERON:0004808,3.29e-09,9;UBERON:0001277,3.29e-09,9;UBERON:0004921,8.92e-09,114;UBERON:0000331,6.97e-08,3;UBERON:0002116,6.97e-08,3;UBERON:0001204,6.97e-08,3;UBERON:0001168,6.97e-08,3;UBERON:0000485,2.15e-07,11 | |||
|phase1_expression=0.320297694209588,2.09385244583617,2.27499619694768,6.35174843744343,5.50985302940982,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,2.29692785646008,1.7230479846363,2.58565479223067,2.85035129184561,2.01624103807945,1.77384408524244,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0,1.97755974187499,0,0,0.161766849947409,0,0,1.86391761218122,0,0.209446706813455,2.81002760729451,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,3.96502539580558,2.11560453330835,0,0,0,0,0.667134131534611,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,0.795825888164603,1.36474860983384,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.775284879504663,1.09060118843252,0,0.632073515871632,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.63549621259146,0,2.96795255294664,0.484393280087717,0.72375509913787,1.19372344003136,1.96969079694074,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.836353184057875,0,0.809186078308924,0.991841468704031,2.09404753587224,1.94422459937689,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.389762468933385,0,0.596044064343795,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,1.13365191807606,0,0,0.167884616364078,0.965947970160952,0.187682475451182,0.183151624267265,2.14368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.338458431566706,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=0.320297694209588,2.09385244583617,2.27499619694768,6.35174843744343,5.50985302940982,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,2.29692785646008,1.7230479846363,2.58565479223067,2.85035129184561,2.01624103807945,1.77384408524244,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,1.5154372870785,1.01343946190039,1.01104889002957,0.45673551887624,0,0,0,0,0.230615497256059,0,0.117588707135705,0,1.97755974187499,0,0,0.161766849947409,0,0,1.86391761218122,0,0.209446706813455,2.81002760729451,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,3.96502539580558,2.11560453330835,0,0,0,0,0.667134131534611,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,0.795825888164603,1.36474860983384,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.775284879504663,1.09060118843252,0,0.632073515871632,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0.63549621259146,0,2.96795255294664,0.484393280087717,0.72375509913787,1.19372344003136,1.96969079694074,1.1659233465194,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.836353184057875,0,0.809186078308924,0.991841468704031,2.09404753587224,1.94422459937689,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0.389762468933385,0,0.596044064343795,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,1.13365191807606,0,0,0.167884616364078,0.965947970160952,0.187682475451182,0.183151624267265,2.14368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0.338458431566706,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.818462086339379,0,0.192906610981141,0.499621155875892,0,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p5@Itgb4 | |short_description=p5@Itgb4 | ||
}} | }} |
Latest revision as of 23:37, 26 September 2015
Short description: | p5@Itgb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Itgb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 131bp_to_ENSMUST00000106460_5end |
EntrezGene: | Itgb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.35e-14 | 6 |
gut absorptive cell | 3.35e-14 | 6 |
enterocyte | 3.35e-14 | 6 |
columnar/cuboidal epithelial cell | 4.61e-12 | 7 |
epithelial cell | 7.44e-11 | 25 |
endo-epithelial cell | 8.47e-11 | 15 |
intestinal epithelial cell | 3.29e-09 | 9 |
epithelial cell of alimentary canal | 3.29e-09 | 9 |
M cell of gut | 6.97e-08 | 3 |
endodermal cell | 1.10e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.44e-24 | 31 |
mucosa | 4.02e-21 | 15 |
gastrointestinal system | 1.01e-17 | 47 |
intestinal mucosa | 3.97e-17 | 13 |
wall of intestine | 3.97e-17 | 13 |
gastrointestinal system mucosa | 3.97e-17 | 13 |
organ component layer | 2.23e-14 | 24 |
digestive system | 1.81e-10 | 116 |
digestive tract | 1.81e-10 | 116 |
primitive gut | 1.81e-10 | 116 |
endoderm-derived structure | 3.54e-10 | 118 |
endoderm | 3.54e-10 | 118 |
presumptive endoderm | 3.54e-10 | 118 |
small intestine | 1.58e-09 | 4 |
epithelium of mucosa | 3.29e-09 | 9 |
gastrointestinal system epithelium | 3.29e-09 | 9 |
intestinal epithelium | 3.29e-09 | 9 |
subdivision of digestive tract | 8.92e-09 | 114 |
ileal mucosa | 6.97e-08 | 3 |
ileum | 6.97e-08 | 3 |
mucosa of small intestine | 6.97e-08 | 3 |
wall of small intestine | 6.97e-08 | 3 |
simple columnar epithelium | 2.15e-07 | 11 |