FFCP PHASE1:Mm9::chr7:29167131..29167164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29167131..29167164,- | |||
|description=CAGE_peak_at_chr7:29167131..29167164,- | |description=CAGE_peak_at_chr7:29167131..29167164,- | ||
|id=chr7:29167131..29167164,- | |id=chr7:29167131..29167164,- | ||
|ontology_enrichment_celltype=CL:0000838!2.13e-08!12;CL:0000988!4.02e-08!32;CL:0002032!4.02e-08!32;CL:0000037!4.02e-08!32;CL:0000566!4.02e-08!32;CL:0000837!4.02e-08!32;CL:0000542!8.67e-08!13;CL:0000051!8.67e-08!13;CL:0000084!1.07e-07!11;CL:0000827!1.07e-07!11;CL:0000063!3.29e-07!66;CL:0000791!5.43e-07!9;CL:0000789!5.43e-07!9;CL:0002420!5.43e-07!9;CL:0002419!5.43e-07!9;CL:0000790!5.43e-07!9 | |ontology_enrichment_celltype=CL:0000838!2.13e-08!12;CL:0000988!4.02e-08!32;CL:0002032!4.02e-08!32;CL:0000037!4.02e-08!32;CL:0000566!4.02e-08!32;CL:0000837!4.02e-08!32;CL:0000542!8.67e-08!13;CL:0000051!8.67e-08!13;CL:0000084!1.07e-07!11;CL:0000827!1.07e-07!11;CL:0000063!3.29e-07!66;CL:0000791!5.43e-07!9;CL:0000789!5.43e-07!9;CL:0002420!5.43e-07!9;CL:0002419!5.43e-07!9;CL:0000790!5.43e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.74e-19,32;CL:0002032,5.74e-19,32;CL:0000037,5.74e-19,32;CL:0000837,5.74e-19,32;CL:0002031,2.49e-18,25;CL:0002320,1.69e-17,46;CL:0000134,1.69e-17,46;CL:0000838,2.19e-17,12;CL:0000791,2.95e-16,9;CL:0000789,2.95e-16,9;CL:0002420,2.95e-16,9;CL:0002419,2.95e-16,9;CL:0000790,2.95e-16,9;CL:0000542,7.75e-16,13;CL:0000051,7.75e-16,13;CL:0000084,1.56e-15,11;CL:0000827,1.56e-15,11;CL:0000219,1.96e-15,54;CL:0000624,1.27e-14,8;CL:0000034,7.20e-12,97;CL:0000738,1.78e-11,17;CL:0002087,1.78e-11,17;CL:0000893,2.90e-11,6;CL:0002489,2.90e-11,6;CL:0000898,2.90e-11,6;CL:0000809,2.90e-11,6;CL:0000810,2.90e-11,6;CL:0000895,2.90e-11,6;CL:0000808,2.90e-11,6;CL:0000894,2.90e-11,6;CL:0000806,2.90e-11,6;CL:0000807,2.90e-11,6;CL:0000805,2.90e-11,6;CL:0002425,2.90e-11,6;CL:0002436,2.90e-11,6;CL:0002427,2.90e-11,6;CL:0002428,2.90e-11,6;CL:0002429,2.90e-11,6;CL:0002433,2.90e-11,6;CL:0002431,2.90e-11,6;CL:0002432,2.90e-11,6;CL:0000723,3.71e-10,91;CL:0000048,3.71e-10,91;CL:0000050,3.22e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,4.00e-08,6;DOID:0060100,9.96e-07,3;DOID:4045,9.96e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.69e-17,46;UBERON:0000490,1.22e-09,66;UBERON:0003408,1.48e-09,24;UBERON:0003929,6.50e-09,55;UBERON:0002370,1.26e-08,23;UBERON:0000974,1.26e-08,23;UBERON:0004807,1.26e-08,23;UBERON:0005058,1.26e-08,23;UBERON:0003351,1.26e-08,23;UBERON:0009113,1.26e-08,23;UBERON:0003295,1.26e-08,23;UBERON:0009722,1.26e-08,23;UBERON:0005562,1.26e-08,23;UBERON:0007690,1.26e-08,23;UBERON:0002390,1.48e-08,45;UBERON:0003061,1.48e-08,45;UBERON:0006562,3.75e-08,24;UBERON:0001557,3.75e-08,24;UBERON:0001042,3.75e-08,24;UBERON:0008814,3.75e-08,24;UBERON:0009145,3.75e-08,24;UBERON:0002193,9.44e-08,48;UBERON:0002405,9.44e-08,48;UBERON:0004177,1.82e-07,29;UBERON:0005057,1.82e-07,29;UBERON:0000072,5.92e-07,27;UBERON:0005911,6.72e-07,69;UBERON:0000077,7.83e-07,35 | |||
|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,2.11724947914781,1.50268718983904,0.839396359559449,0.467225281191051,2.1950964985068,5.63154888606667,3.97909694747389,3.5955773327356,1.83475965689274,1.88320802924326,3.05971408466491,0.666219523631325,1.41732687172878,0,4.10100814965709,3.97631857456642,5.09267582157636,0.425216450755349,1.09220046320974,0.783599367416806,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,1.90509202037889,3.69038872550742,0,2.3108129580102,0.332469290716985,2.04169356262369,11.3003540298965,3.1253413780952,2.61761871986899,37.0585837459539,19.1252735788365,8.25367600152961,0.377690453926732,0.202753862439029,0.367093504323363,2.34717403304412,0,0.439372365468944,0.777719596297134,0.139986421625363,0,8.55691290894455,5.80289713609076,3.02484419228218,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.075726193333184,0,3.47837386442013,1.72084775396277,2.03991400112325,1.07940638327563,0,0.896053774194671,0.421333260395256,0,0.519572009205738,0.35333957451034,0.704217098883403,0,0,0,0.649473123033642,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0.838705871541442,3.59941638596045,2.1601938602421,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.497627882440372,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,1.13665399758237,0,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.697601834251224,1.07309360559848,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0,0.102904612379284,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0,0,0,0,0,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0,0.482443521363367,0.739012760666419,0.37898282354097,0,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,0,0.318909537314974,1.63863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0,0,0.141940085208269,0.35613120733451,0,0.659880491890142,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.36175842301515,0.18006109403131,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0.661585194164886,0.8244312647074,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0.370389054739423,0.376736914009382,0.410082683163076,0.686334519619568,2.03974115992626,1.39951452323658,2.21119958087078,0,0.474503990371703,0,0.324016022465404,0.836353184057875,0.436725127492355,0,0.165306911450672,0,0.259229946583586,1.24267862617385,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.938857909166032,0,0.314578033277133,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0.358053391334963,0.993406773906324,1.44234539423963,0.295379054349154,1.31256384932592,1.5241361331,0.907435666231565,1.55932609183604,1.34696578296461,2.68816875017609,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,2.11724947914781,1.50268718983904,0.839396359559449,0.467225281191051,2.1950964985068,5.63154888606667,3.97909694747389,3.5955773327356,1.83475965689274,1.88320802924326,3.05971408466491,0.666219523631325,1.41732687172878,0,4.10100814965709,3.97631857456642,5.09267582157636,0.425216450755349,1.09220046320974,0.783599367416806,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.756090389279792,0.221730510655305,1.90509202037889,3.69038872550742,0,2.3108129580102,0.332469290716985,2.04169356262369,11.3003540298965,3.1253413780952,2.61761871986899,37.0585837459539,19.1252735788365,8.25367600152961,0.377690453926732,0.202753862439029,0.367093504323363,2.34717403304412,0,0.439372365468944,0.777719596297134,0.139986421625363,0,8.55691290894455,5.80289713609076,3.02484419228218,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.075726193333184,0,3.47837386442013,1.72084775396277,2.03991400112325,1.07940638327563,0,0.896053774194671,0.421333260395256,0,0.519572009205738,0.35333957451034,0.704217098883403,0,0,0,0.649473123033642,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0.838705871541442,3.59941638596045,2.1601938602421,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.497627882440372,0,0,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,1.13665399758237,0,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0.697601834251224,1.07309360559848,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.402619256281115,0,0.102904612379284,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0,0,0,0,0,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0,0.482443521363367,0.739012760666419,0.37898282354097,0,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.788175720530955,0,0.318909537314974,1.63863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,0,0.117211686592203,0,0.757412781613119,0,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0,0,0.141940085208269,0.35613120733451,0,0.659880491890142,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.36175842301515,0.18006109403131,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0.661585194164886,0.8244312647074,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0.370389054739423,0.376736914009382,0.410082683163076,0.686334519619568,2.03974115992626,1.39951452323658,2.21119958087078,0,0.474503990371703,0,0.324016022465404,0.836353184057875,0.436725127492355,0,0.165306911450672,0,0.259229946583586,1.24267862617385,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.938857909166032,0,0.314578033277133,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0.25984164595559,0.358053391334963,0.993406773906324,1.44234539423963,0.295379054349154,1.31256384932592,1.5241361331,0.907435666231565,1.55932609183604,1.34696578296461,2.68816875017609,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p@chr7:29167131..29167164,- | |short_description=p@chr7:29167131..29167164,- | ||
}} | }} |
Latest revision as of 23:03, 4 August 2015
Short description: | p@chr7:29167131..29167164, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29167131..29167164, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.69e-17 | 46 |
unilaminar epithelium | 1.22e-09 | 66 |
gland of gut | 1.48e-09 | 24 |
gut epithelium | 6.50e-09 | 55 |
thymus | 1.26e-08 | 23 |
neck | 1.26e-08 | 23 |
respiratory system epithelium | 1.26e-08 | 23 |
hemolymphoid system gland | 1.26e-08 | 23 |
pharyngeal epithelium | 1.26e-08 | 23 |
thymic region | 1.26e-08 | 23 |
pharyngeal gland | 1.26e-08 | 23 |
entire pharyngeal arch endoderm | 1.26e-08 | 23 |
thymus primordium | 1.26e-08 | 23 |
early pharyngeal endoderm | 1.26e-08 | 23 |
hematopoietic system | 1.48e-08 | 45 |
blood island | 1.48e-08 | 45 |
pharynx | 3.75e-08 | 24 |
upper respiratory tract | 3.75e-08 | 24 |
chordate pharynx | 3.75e-08 | 24 |
pharyngeal arch system | 3.75e-08 | 24 |
pharyngeal region of foregut | 3.75e-08 | 24 |
hemolymphoid system | 9.44e-08 | 48 |
immune system | 9.44e-08 | 48 |
hemopoietic organ | 1.82e-07 | 29 |
immune organ | 1.82e-07 | 29 |
segment of respiratory tract | 5.92e-07 | 27 |
endo-epithelium | 6.72e-07 | 69 |
mixed endoderm/mesoderm-derived structure | 7.83e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 4.00e-08 | 6 |
musculoskeletal system cancer | 9.96e-07 | 3 |
muscle cancer | 9.96e-07 | 3 |