FFCP PHASE1:Mm9::chrX:93650736..93650750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15203 | |EntrezGene=15203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3283 | |MCL_coexpression_id=3283 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z0Z4 | |UniProt=Q9Z0Z4 | ||
|association_with_transcript=-24bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | |association_with_transcript=-24bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | ||
|cluster_id=chrX:93650736..93650750,+ | |||
|description=CAGE_peak_8_at_Heph_5end | |description=CAGE_peak_8_at_Heph_5end | ||
|id=chrX:93650736..93650750,+ | |id=chrX:93650736..93650750,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.25e-09!9;CL:0002251!9.25e-09!9;CL:0000239!7.04e-07!6;CL:0000677!7.04e-07!6;CL:0000212!7.04e-07!6;CL:0000584!7.04e-07!6 | |ontology_enrichment_celltype=CL:0002563!9.25e-09!9;CL:0002251!9.25e-09!9;CL:0000239!7.04e-07!6;CL:0000677!7.04e-07!6;CL:0000212!7.04e-07!6;CL:0000584!7.04e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-13,6;CL:0000677,1.04e-13,6;CL:0000584,1.04e-13,6;CL:0002563,1.12e-11,9;CL:0002251,1.12e-11,9;CL:0000075,1.22e-11,7;CL:0000682,9.04e-08,3;CL:0000066,2.28e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.11e-18!43;UBERON:0005409!2.17e-15!59;UBERON:0000344!1.74e-14!15;UBERON:0001242!1.66e-12!13;UBERON:0000060!1.66e-12!13;UBERON:0001262!1.66e-12!13;UBERON:0004786!1.66e-12!13;UBERON:0004923!1.93e-10!24;UBERON:0003350!9.25e-09!9;UBERON:0004808!9.25e-09!9;UBERON:0001277!9.25e-09!9;UBERON:0001008!3.14e-07!17;UBERON:0006554!6.38e-07!16 | |ontology_enrichment_uberon=UBERON:0000160!2.11e-18!43;UBERON:0005409!2.17e-15!59;UBERON:0000344!1.74e-14!15;UBERON:0001242!1.66e-12!13;UBERON:0000060!1.66e-12!13;UBERON:0001262!1.66e-12!13;UBERON:0004786!1.66e-12!13;UBERON:0004923!1.93e-10!24;UBERON:0003350!9.25e-09!9;UBERON:0004808!9.25e-09!9;UBERON:0001277!9.25e-09!9;UBERON:0001008!3.14e-07!17;UBERON:0006554!6.38e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.66e-44,31;UBERON:0005409,3.33e-29,47;UBERON:0000344,3.60e-24,15;UBERON:0001242,8.46e-20,13;UBERON:0001262,8.46e-20,13;UBERON:0004786,8.46e-20,13;UBERON:0004923,2.05e-16,24;UBERON:0003350,1.12e-11,9;UBERON:0004808,1.12e-11,9;UBERON:0001277,1.12e-11,9;UBERON:0001007,5.31e-10,116;UBERON:0001555,5.31e-10,116;UBERON:0007026,5.31e-10,116;UBERON:0002108,9.32e-10,4;UBERON:0004119,1.02e-09,118;UBERON:0000925,1.02e-09,118;UBERON:0006595,1.02e-09,118;UBERON:0000485,2.36e-09,11;UBERON:0004921,2.73e-08,114;UBERON:0000331,1.06e-07,3;UBERON:0002116,1.06e-07,3;UBERON:0001204,1.06e-07,3;UBERON:0001168,1.06e-07,3 | |||
|phase1_expression=0,3.14077866875425,5.0049916332849,4.23449895829562,1.50268718983904,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.67982572424835,4.5881856213434,2.29692785646008,5.1691439539089,2.58565479223067,2.28028103347649,2.77233142735924,4.43461021310609,0,0,0,0.866554859253824,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,3.70792451601561,1.59059292611903,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,1.58670339998127,0,0.464473343720877,1.28867461322093,0.80673409849337,2.2237804384487,2.47293313946327,1.89811624617805,2.79988223030818,2.76468729680296,1.39269530428806,1.16978452271472,4.49409704327111,3.24207074812041,1.99141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.581857461502877,0.350679099451593,0.632365371242573,0.590440591918409,1.41298855057237,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.329098041204242,0,0.23467170806371,0.63549621259146,0.661585194164886,2.4732937941222,0.968786560175433,0.904693873922338,1.19372344003136,1.47726809770555,2.91480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,12.0377304968487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.192075457214608,0.229741875822453,0,0.231768651889711,0.77163688185482,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0,0.394017929502254,0.818462086339379,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,3.14077866875425,5.0049916332849,4.23449895829562,1.50268718983904,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.67982572424835,4.5881856213434,2.29692785646008,5.1691439539089,2.58565479223067,2.28028103347649,2.77233142735924,4.43461021310609,0,0,0,0.866554859253824,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,3.70792451601561,1.59059292611903,0,0,0,0,1.86391761218122,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,1.58670339998127,0,0.464473343720877,1.28867461322093,0.80673409849337,2.2237804384487,2.47293313946327,1.89811624617805,2.79988223030818,2.76468729680296,1.39269530428806,1.16978452271472,4.49409704327111,3.24207074812041,1.99141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.581857461502877,0.350679099451593,0.632365371242573,0.590440591918409,1.41298855057237,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.329098041204242,0,0.23467170806371,0.63549621259146,0.661585194164886,2.4732937941222,0.968786560175433,0.904693873922338,1.19372344003136,1.47726809770555,2.91480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,2.46268449254406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,12.0377304968487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.192075457214608,0.229741875822453,0,0.231768651889711,0.77163688185482,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0,0.394017929502254,0.818462086339379,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p8@Heph | |short_description=p8@Heph | ||
}} | }} |
Latest revision as of 00:52, 2 October 2015
Short description: | p8@Heph |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Heph_5end |
Coexpression cluster: | MCL_coexpression_mm9:3283 |
Association with transcript: | -24bp_to_NM_001159628, NM_010417, uc009tuk.2, uc009tul.2_5end |
EntrezGene: | Heph |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.04e-13 | 6 |
gut absorptive cell | 1.04e-13 | 6 |
enterocyte | 1.04e-13 | 6 |
intestinal epithelial cell | 1.12e-11 | 9 |
epithelial cell of alimentary canal | 1.12e-11 | 9 |
columnar/cuboidal epithelial cell | 1.22e-11 | 7 |
M cell of gut | 9.04e-08 | 3 |
epithelial cell | 2.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.66e-44 | 31 |
gastrointestinal system | 3.33e-29 | 47 |
mucosa | 3.60e-24 | 15 |
intestinal mucosa | 8.46e-20 | 13 |
wall of intestine | 8.46e-20 | 13 |
gastrointestinal system mucosa | 8.46e-20 | 13 |
organ component layer | 2.05e-16 | 24 |
epithelium of mucosa | 1.12e-11 | 9 |
gastrointestinal system epithelium | 1.12e-11 | 9 |
intestinal epithelium | 1.12e-11 | 9 |
digestive system | 5.31e-10 | 116 |
digestive tract | 5.31e-10 | 116 |
primitive gut | 5.31e-10 | 116 |
small intestine | 9.32e-10 | 4 |
endoderm-derived structure | 1.02e-09 | 118 |
endoderm | 1.02e-09 | 118 |
presumptive endoderm | 1.02e-09 | 118 |
simple columnar epithelium | 2.36e-09 | 11 |
subdivision of digestive tract | 2.73e-08 | 114 |
ileal mucosa | 1.06e-07 | 3 |
ileum | 1.06e-07 | 3 |
mucosa of small intestine | 1.06e-07 | 3 |
wall of small intestine | 1.06e-07 | 3 |