FFCP PHASE1:Hg19::chr2:21225647..21225655,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:21225647..21225655,-
|short_description=p47@APOB
|description=CAGE_peak_47_at_APOB_5end
|association_with_transcript=-6bp_to_M36676_5end
|EntrezGene=338
...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-6bp_to_M36676_5end | |||
|cluster_id=chr2:21225647..21225655,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_47_at_APOB_5end | |||
|id=chr2:21225647..21225655,- | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-35!12;CL:0000417!1.69e-35!12;CL:0000668!1.69e-35!12;CL:0000414!1.69e-35!12;CL:0000412!1.69e-35!12;CL:0000182!1.69e-35!12;CL:0000223!2.74e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.60e-52;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.60e-52,12;CL:0000223,5.27e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.69e-56;11!UBERON:0009497;2.17e-47;13!UBERON:0001041;8.47e-21;30!UBERON:0003104;4.43e-20;31!CL:0000223;1.17e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.31e-39!19;UBERON:0006925!3.31e-39!19;UBERON:0008836!3.31e-39!19;UBERON:0008835!9.10e-34!22;UBERON:0003894!9.10e-34!22;UBERON:0009854!2.87e-32!23;UBERON:0007499!1.25e-29!25;UBERON:0009497!1.25e-29!25;UBERON:0000015!1.25e-29!25;UBERON:0002423!1.25e-29!25;UBERON:0006235!1.25e-29!25;UBERON:0004161!1.25e-29!25;UBERON:0005057!1.83e-28!26;UBERON:0009856!1.83e-28!26;UBERON:0002365!9.40e-24!31;UBERON:0002330!9.40e-24!31;UBERON:0002368!5.96e-21!35;UBERON:0003929!9.25e-17!54;UBERON:0000949!4.07e-16!45;UBERON:0005172!4.92e-13!55;UBERON:0005173!4.92e-13!55;UBERON:0002530!4.30e-12!59;UBERON:0002417!1.14e-11!61;UBERON:0000916!1.14e-11!61;UBERON:0004921!1.68e-11!129;UBERON:0004185!1.68e-11!129;UBERON:0005911!1.13e-10!82;UBERON:0001007!2.64e-09!155;UBERON:0001555!2.64e-09!155;UBERON:0007026!2.64e-09!155;UBERON:0004119!2.12e-08!169;UBERON:0000925!2.12e-08!169;UBERON:0006595!2.12e-08!169;UBERON:0000466!4.12e-08!126;UBERON:0001041!6.35e-07!98;UBERON:0000160!6.79e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.96e-63;19!UBERON:0006925;1.96e-63;19!UBERON:0002423;2.67e-48;25!UBERON:0002365;3.83e-37;31!UBERON:0002330;3.83e-37;31!UBERON:0002368;4.05e-33;33!UBERON:0000949;5.19e-24;43!UBERON:0005172;2.41e-14;52!UBERON:0005173;2.41e-14;52!UBERON:0002530;1.74e-13;57!UBERON:0002417;9.15e-12;58!UBERON:0000916;9.15e-12;58!UBERON:0001007;5.66e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.16e-63,19;UBERON:0006925,2.16e-63,19;UBERON:0008836,2.16e-63,19;UBERON:0008835,8.41e-55,22;UBERON:0003894,8.41e-55,22;UBERON:0009854,1.96e-52,23;UBERON:0007499,2.87e-48,25;UBERON:0009497,2.87e-48,25;UBERON:0000015,2.87e-48,25;UBERON:0002423,2.87e-48,25;UBERON:0006235,2.87e-48,25;UBERON:0004161,2.87e-48,25;UBERON:0009856,2.00e-46,26;UBERON:0002365,5.48e-39,31;UBERON:0002330,5.48e-39,31;UBERON:0002368,1.45e-34,35;UBERON:0000949,6.17e-27,45;UBERON:0003929,1.77e-22,54;UBERON:0005172,1.77e-22,54;UBERON:0005173,1.77e-22,54;UBERON:0002530,1.38e-20,59;UBERON:0002417,3.03e-20,60;UBERON:0000916,3.03e-20,60;UBERON:0005911,7.70e-15,82;UBERON:0001041,5.44e-14,87;UBERON:0004921,2.56e-13,118;UBERON:0005177,4.69e-12,101;UBERON:0009569,7.18e-11,112;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0003914,2.10e-10,117;UBERON:0005256,5.62e-10,122;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000490,3.27e-08,148;UBERON:0001048,1.38e-07,160;UBERON:0003104,1.38e-07,160;UBERON:0009142,1.38e-07,160;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,4.91413608338813,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59984501613838,3.37905019362782,2.02210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,4.91413608338813,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59984501613838,3.37905019362782,2.02210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p47@APOB | |||
}} | }} |
Latest revision as of 22:53, 19 September 2015
Short description: | p47@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -6bp_to_M36676_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.60e-52 | 12 |
endodermal cell | 5.27e-11 | 58 |