FFCP PHASE1:Hg19::chr2:203706578..203706583,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:203706578..203706583,-
|short_description=p1@KRT8P15
|description=CAGE_peak_1_at_KRT8P15_5end
|association_with_transcript=-74bp_to_ENST00000425226_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33367 | |HGNC=33367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-74bp_to_ENST00000425226_5end | |||
|cluster_id=chr2:203706578..203706583,- | |||
|coexpression_cluster_id=C819 | |||
|description=CAGE_peak_1_at_KRT8P15_5end | |||
|id=chr2:203706578..203706583,- | |||
|ontology_enrichment_celltype=CL:0000066!6.66e-41!254;CL:0000077!2.88e-14!19;CL:0000223!9.24e-10!59;CL:0000039!2.69e-08!7;CL:0000586!2.69e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.11e-16;19!CL:0002536;3.91e-14;2!CL:0000239;1.01e-09;3!CL:1000615;1.01e-09;3!CL:0002306;1.01e-09;3!CL:0002178;1.34e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.47e-16,19;CL:0000066,3.44e-15,253;CL:0002536,2.16e-14,2;CL:0002178,1.26e-09,3;CL:0000239,1.44e-09,3;CL:1000615,1.44e-09,3;CL:0002306,1.44e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.28e-44!106;DOID:0050687!5.24e-40!143;DOID:162!9.86e-31!235;DOID:14566!1.89e-29!239;DOID:299!7.52e-13!25;DOID:7!1.32e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.03e-15;4!DOID:1612;1.03e-15;4!DOID:299;1.10e-15;25!DOID:3493;5.99e-14;2!DOID:1799;1.22e-07;1!DOID:10165;1.22e-07;1!DOID:1798;1.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.29e-16,4;DOID:1612,8.29e-16,4;DOID:299,8.95e-16,25;DOID:3493,5.10e-14,2;DOID:305,2.98e-09,106;DOID:162,6.14e-08,235;DOID:14566,1.09e-07,239;DOID:1799,1.35e-07,1;DOID:10165,1.35e-07,1;DOID:1798,1.35e-07,1;DOID:0050687,3.32e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.24e-15!169;UBERON:0000925!4.24e-15!169;UBERON:0006595!4.24e-15!169;UBERON:0000077!2.53e-14!130;UBERON:0001007!9.64e-14!155;UBERON:0001555!9.64e-14!155;UBERON:0007026!9.64e-14!155;UBERON:0004921!2.60e-13!129;UBERON:0004185!2.60e-13!129;UBERON:0005911!1.18e-10!82;UBERON:0001041!1.44e-10!98;UBERON:0000466!2.81e-10!126;UBERON:0008947!1.88e-09!38;UBERON:0003258!1.88e-09!38;UBERON:0003104!2.47e-09!238;UBERON:0009142!2.47e-09!238;UBERON:0001737!2.82e-09!9;UBERON:0000065!8.90e-09!53;UBERON:0002294!1.26e-08!7;UBERON:0001173!1.26e-08!7;UBERON:0004912!1.26e-08!7;UBERON:0005177!1.38e-08!107;UBERON:0000072!2.00e-08!46;UBERON:0003929!2.89e-08!54;UBERON:0001048!3.46e-08!168;UBERON:0009569!6.15e-08!113;UBERON:0009497!8.16e-08!25;UBERON:0000015!8.16e-08!25;UBERON:0002423!8.16e-08!25;UBERON:0006235!8.16e-08!25;UBERON:0004161!8.16e-08!25;UBERON:0005631!9.80e-08!14;UBERON:0000158!9.80e-08!14;UBERON:0005172!1.02e-07!55;UBERON:0005173!1.02e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.01e-09;3!UBERON:0007685;1.01e-09;3!UBERON:0004134;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.44e-09,3;UBERON:0007685,1.44e-09,3;UBERON:0004134,1.44e-09,3 | |||
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| ||
|short_description=p1@KRT8P15 | |||
}} | }} |
Latest revision as of 14:45, 19 September 2015
Short description: | p1@KRT8P15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT8P15_5end |
Coexpression cluster: | C819_Alveolar_MCF7_mesothelioma_endometrioid_signet_Renal_gastric |
Association with transcript: | -74bp_to_ENST00000425226_5end |
EntrezGene: | NA |
HGNC: | 33367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.47e-16 | 19 |
epithelial cell | 3.44e-15 | 253 |
amniotic epithelial cell | 2.16e-14 | 2 |
epithelial cell of stomach | 1.26e-09 | 3 |
brush border epithelial cell | 1.44e-09 | 3 |
kidney cortex tubule cell | 1.44e-09 | 3 |
epithelial cell of proximal tubule | 1.44e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.44e-09 | 3 |
region of nephron tubule | 1.44e-09 | 3 |
proximal tubule | 1.44e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.29e-16 | 4 |
breast cancer | 8.29e-16 | 4 |
adenocarcinoma | 8.95e-16 | 25 |
signet ring cell adenocarcinoma | 5.10e-14 | 2 |
carcinoma | 2.98e-09 | 106 |
cancer | 6.14e-08 | 235 |
disease of cellular proliferation | 1.09e-07 | 239 |
islet cell tumor | 1.35e-07 | 1 |
endocrine pancreas cancer | 1.35e-07 | 1 |
pancreatic endocrine carcinoma | 1.35e-07 | 1 |
cell type cancer | 3.32e-07 | 143 |