FFCP PHASE1:Hg19::chr2:201474023..201474035,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:201474023..201474035,+
|short_description=p5@AOX1
|description=CAGE_peak_5_at_AOX1_5end
|association_with_transcript=57bp_to_ENST00000485106_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=316 | |EntrezGene=316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=553 | |HGNC=553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000485106_5end | |||
|cluster_id=chr2:201474023..201474035,+ | |||
|description=CAGE_peak_5_at_AOX1_5end | |||
|id=chr2:201474023..201474035,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.58e-16!180;CL:0000057!3.29e-14!75;CL:0002551!2.61e-08!6;CL:0002620!5.64e-08!23;CL:0000680!5.91e-07!57;CL:0000056!5.91e-07!57;CL:0000355!5.91e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002559;5.12e-15;5!CL:0002551;2.45e-12;6!CL:0002561;6.67e-11;2!CL:0002595;6.97e-09;5!CL:0000515;1.90e-07;3!CL:0002540;2.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,5.04e-15,5;CL:0002551,1.50e-12,6;CL:0002561,6.53e-11,2;CL:0002595,6.36e-09,5;CL:0002540,2.05e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.55e-14;3!DOID:127;3.55e-14;3!DOID:0060072;9.39e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.90e-14,3;DOID:127,3.90e-14,3;DOID:0060072,1.01e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.04e-13!83;UBERON:0002329!6.04e-13!83;UBERON:0003077!6.04e-13!83;UBERON:0003059!6.04e-13!83;UBERON:0007282!6.04e-13!83;UBERON:0009618!6.04e-13!83;UBERON:0007285!6.04e-13!83;UBERON:0003102!2.85e-11!95;UBERON:0000486!4.90e-11!82;UBERON:0004290!1.54e-10!70;UBERON:0002067!4.44e-09!9;UBERON:0004016!4.44e-09!9;UBERON:0010083!4.44e-09!9;UBERON:0002097!2.43e-08!40;UBERON:0002199!2.49e-08!45;UBERON:0002416!2.49e-08!45;UBERON:0005256!1.03e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;2.43e-17;9!UBERON:0002073;5.12e-15;5!UBERON:0005933;6.67e-11;2!UBERON:0005942;6.67e-11;2!UBERON:0005932;6.67e-11;2!UBERON:0003834;6.97e-09;5!UBERON:0001533;6.97e-09;5!UBERON:0002097;9.91e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.51e-17,9;UBERON:0004016,1.51e-17,9;UBERON:0010083,1.51e-17,9;UBERON:0002073,5.04e-15,5;UBERON:0005086,5.04e-15,5;UBERON:0005933,6.53e-11,2;UBERON:0005942,6.53e-11,2;UBERON:0005932,6.53e-11,2;UBERON:0002329,7.04e-11,71;UBERON:0003059,7.04e-11,71;UBERON:0007282,7.04e-11,71;UBERON:0004290,7.04e-11,71;UBERON:0009618,7.04e-11,71;UBERON:0003077,1.11e-10,72;UBERON:0007285,1.11e-10,72;UBERON:0007524,1.72e-10,73;UBERON:0000486,2.85e-10,83;UBERON:0007503,1.30e-09,78;UBERON:0002097,3.38e-09,41;UBERON:0003834,6.36e-09,5;UBERON:0001533,6.36e-09,5;UBERON:0002199,5.36e-08,46;UBERON:0002416,5.36e-08,46 | |||
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|phase1_expression=0.181678379270557,1.2846031433459,0.281908808191942,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0,0,0.618831764800233,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.32409180813219,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,3.74592092196385,1.71141546463335,4.48346041655403,0.939475989150119,0.647491777472526,1.96631129383148,0.816616685019573,0.122834317311768,0.413303124703062,0,0.494533858557114,0,0,0.336672227908132,0.875829639103749,2.49357703935765,0,0.919463387397059,2.25357088359895,0.113432183160021,0.358779271377724,0,1.05965950579781,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0,0,0.920498986422993,0,0,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,19.5034529773431,7.94067429836544,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.447792613514241,1.16253575405585,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.7333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,2.28015329005615,0,0,6.33022691825131,1.74306691720059,5.99837947092342,0,0,0,0,0,0,9.12122232005749,4.72595541865882,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.713715955188647,0.473107245101804,0.819989904948992,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.306923946576125,0.841980283299221,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.460404944679482,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0.462145851343933,0.15350367472613,1.37836572484531,0.214840489736547,0.725083469571143,0.767039646744908,0,0,0.576570202095319,0.510450849978337,0.10115778085555,0,0,0,0,1.06461206063404,0,0.74129687641568,0.286249773483982,0,0.632758849437452,0.953150969619124,0,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,2.68084838594413,0,0,0,0,0,2.65375590096488,2.63070531152258,0,0,0,0.6196469961995,0,0.143411352204052,0,0.35667105148125,1.06428319221179,3.79993743535795,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0.179736702294654,0,0,0,0,7.77958931012458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0.171986032471617,0.290268993867255,0.146178634172371,0.164230914106418,0,0,0,0,0.794858446811959,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,2.17199840701485,2.5926644736038,1.63293680054705,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0,0,2.84104507912634,1.50940741051545,2.66943366478961,0.457680136793847,0.604923695052956,0,0,0.796483835818512,0,0.310525913752519,0,0.797525143673985,1.04349012362347,0.150257608997218,2.66563648518157,0.406870733204662,0.727394636810238,0.429642228169954,0.464033759878494,1.19428766609585,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,1.59020231351293,0,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,6.2164849248911,0.51215543128185,0,0,0.354996002191696,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0.743990036333503,2.77305377178851,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.25458863311266,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 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|short_description=p5@AOX1 | |||
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Latest revision as of 10:44, 19 September 2015
Short description: | p5@AOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000485106_5end |
EntrezGene: | AOX1 |
HGNC: | 553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 5.04e-15 | 5 |
fibroblast of dermis | 1.50e-12 | 6 |
outer root sheath cell | 6.53e-11 | 2 |
smooth muscle cell of the subclavian artery | 6.36e-09 | 5 |
mesenchymal stem cell of the bone marrow | 2.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.51e-17 | 9 |
dermatome | 1.51e-17 | 9 |
future dermis | 1.51e-17 | 9 |
hair follicle | 5.04e-15 | 5 |
hair follicle placode | 5.04e-15 | 5 |
hair root sheath | 6.53e-11 | 2 |
hair outer root sheath | 6.53e-11 | 2 |
bulb of hair follicle | 6.53e-11 | 2 |
somite | 7.04e-11 | 71 |
presomitic mesoderm | 7.04e-11 | 71 |
presumptive segmental plate | 7.04e-11 | 71 |
dermomyotome | 7.04e-11 | 71 |
trunk paraxial mesoderm | 7.04e-11 | 71 |
paraxial mesoderm | 1.11e-10 | 72 |
presumptive paraxial mesoderm | 1.11e-10 | 72 |
dense mesenchyme tissue | 1.72e-10 | 73 |
multilaminar epithelium | 2.85e-10 | 83 |
epithelial vesicle | 1.30e-09 | 78 |
skin of body | 3.38e-09 | 41 |
thoracic segment blood vessel | 6.36e-09 | 5 |
subclavian artery | 6.36e-09 | 5 |
integument | 5.36e-08 | 46 |
integumental system | 5.36e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.90e-14 | 3 |
leiomyoma | 3.90e-14 | 3 |
benign neoplasm | 1.01e-10 | 4 |