Personal tools

FFCP PHASE1:Mm9::chr11:109092479..109092489,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=16
|MCL_coexpression_id=16
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:109092479..109092489,-
|description=CAGE_peak_at_chr11:109092479..109092489,-
|description=CAGE_peak_at_chr11:109092479..109092489,-
|id=chr11:109092479..109092489,-
|id=chr11:109092479..109092489,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.83e-16!71;UBERON:0003075!6.83e-16!71;UBERON:0007284!6.83e-16!71;UBERON:0003056!1.01e-14!49;UBERON:0000033!4.46e-13!63;UBERON:0001049!5.96e-12!52;UBERON:0005068!5.96e-12!52;UBERON:0006241!5.96e-12!52;UBERON:0007135!5.96e-12!52;UBERON:0004121!9.20e-11!102;UBERON:0000924!9.20e-11!102;UBERON:0006601!9.20e-11!102;UBERON:0003080!1.38e-10!40;UBERON:0002780!4.33e-10!39;UBERON:0001890!4.33e-10!39;UBERON:0006240!4.33e-10!39;UBERON:0000955!9.90e-10!50;UBERON:0006238!9.90e-10!50;UBERON:0001017!1.81e-09!73;UBERON:0005743!1.81e-09!73;UBERON:0002616!1.98e-09!49;UBERON:0000153!6.93e-09!94;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0007811!1.50e-07!86;UBERON:0002020!1.81e-07!34
|ontology_enrichment_uberon=UBERON:0002346!6.83e-16!71;UBERON:0003075!6.83e-16!71;UBERON:0007284!6.83e-16!71;UBERON:0003056!1.01e-14!49;UBERON:0000033!4.46e-13!63;UBERON:0001049!5.96e-12!52;UBERON:0005068!5.96e-12!52;UBERON:0006241!5.96e-12!52;UBERON:0007135!5.96e-12!52;UBERON:0004121!9.20e-11!102;UBERON:0000924!9.20e-11!102;UBERON:0006601!9.20e-11!102;UBERON:0003080!1.38e-10!40;UBERON:0002780!4.33e-10!39;UBERON:0001890!4.33e-10!39;UBERON:0006240!4.33e-10!39;UBERON:0000955!9.90e-10!50;UBERON:0006238!9.90e-10!50;UBERON:0001017!1.81e-09!73;UBERON:0005743!1.81e-09!73;UBERON:0002616!1.98e-09!49;UBERON:0000153!6.93e-09!94;UBERON:0000073!1.12e-08!75;UBERON:0001016!1.12e-08!75;UBERON:0007811!1.50e-07!86;UBERON:0002020!1.81e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.54e-22,49;UBERON:0002346,3.00e-21,64;UBERON:0003075,3.00e-21,64;UBERON:0007284,3.00e-21,64;UBERON:0010371,2.41e-19,73;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0003080,1.58e-14,40;UBERON:0002780,2.46e-13,39;UBERON:0001890,2.46e-13,39;UBERON:0006240,2.46e-13,39;UBERON:0001049,3.16e-13,52;UBERON:0005068,3.16e-13,52;UBERON:0006241,3.16e-13,52;UBERON:0007135,3.16e-13,52;UBERON:0010314,8.02e-13,92;UBERON:0000073,1.47e-12,54;UBERON:0002616,4.45e-12,46;UBERON:0000955,9.89e-12,47;UBERON:0006238,9.89e-12,47;UBERON:0001894,7.90e-11,10;UBERON:0006222,7.90e-11,10;UBERON:0001017,2.68e-10,73;UBERON:0000970,6.68e-10,9;UBERON:0000019,6.68e-10,9;UBERON:0000047,6.68e-10,9;UBERON:0010312,6.68e-10,9;UBERON:0004088,6.68e-10,9;UBERON:0002104,6.68e-10,9;UBERON:0001456,6.68e-10,9;UBERON:0003072,6.68e-10,9;UBERON:0004128,6.68e-10,9;UBERON:0003071,6.68e-10,9;UBERON:0001016,6.91e-10,75;UBERON:0001444,6.04e-08,11;UBERON:0000483,1.07e-07,174;UBERON:0000119,1.59e-07,176;UBERON:0000007,2.23e-07,8;UBERON:0003296,2.23e-07,8;UBERON:0010133,2.23e-07,8;UBERON:0002020,2.50e-07,34;UBERON:0000020,3.27e-07,12;UBERON:0001032,3.27e-07,12;UBERON:0004456,3.27e-07,12
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0.515672092277442,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.630974884054146,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0.919218786610021,0,0.255374676170375,0.921639199537461,0.791317726381163,0.914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,1.68078072554491,1.76777151284201,2.98980529678116,0.931997229126503,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.60289056221049,0.705532242814229,0.251333182659351,0,0,0,0.323533699894818,0,0,0,0.585561594023094,0,0.766371165625774,0,0,0,1.04853447583376,8.23501085073528,2.89005009859588,1.39059456153821,1.27857728665165,1.0389402227978,4.38051410282946,0.611036183101898,1.49288364732112,3.28539585963777,20.8337437327609,0.780722657776222,0,0.900310649026746,1.65775299619287,3.94611695077702,5.63700369253339,1.96773621575431,59.7604786407126,0.646703978798527,0.567318240503458,0.703804496655795,0.219195732427575,0.834141747676794,0.696504333044333,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0.536546802799238,0,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,1.15289268306808,0.754005626400808,1.39269530428806,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.420814919341911,0.126473074248515,0.442830443938806,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,1.55025282754142,0.956728611944923,0.983179888294428,1.20879487306127,0.144649058581512,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0.390438744296638,1.93881057959519,0,0,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0.283880170416537,0,0.325773918707152,0.989820737835213,0,0.242780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,3.06395645178409,0.540183282093931,0.517434735131018,1.92903331528433,1.59606210278046,1.42695054081656,1.97458824722545,0.608929898229199,0,0.21183207086382,0.220528398054962,0,0,0.361877549568935,1.07435109602823,0.820704498725306,1.1659233465194,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,0.436725127492355,0.809186078308924,0.495920734352016,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0.576060012515731,0,0.202725215290164,0.410843828659309,1.29920822977795,0,0.39736270956253,0,0.295379054349154,0,0.457240839929999,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,1.71868654031819,0.515559547031063,0,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.31136204275253,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.760437899670719,1.13175804831646,0.0936415074698824,0.384150914429216,0.114870937911227,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.282328141245992,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.382576664137687,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0.515672092277442,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.630974884054146,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0.919218786610021,0,0.255374676170375,0.921639199537461,0.791317726381163,0.914876436024097,1.04182674111352,0.279182999001381,0.56276261003168,1.68078072554491,1.76777151284201,2.98980529678116,0.931997229126503,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0.60289056221049,0.705532242814229,0.251333182659351,0,0,0,0.323533699894818,0,0,0,0.585561594023094,0,0.766371165625774,0,0,0,1.04853447583376,8.23501085073528,2.89005009859588,1.39059456153821,1.27857728665165,1.0389402227978,4.38051410282946,0.611036183101898,1.49288364732112,3.28539585963777,20.8337437327609,0.780722657776222,0,0.900310649026746,1.65775299619287,3.94611695077702,5.63700369253339,1.96773621575431,59.7604786407126,0.646703978798527,0.567318240503458,0.703804496655795,0.219195732427575,0.834141747676794,0.696504333044333,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0.536546802799238,0,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,1.05144974282064,1.44066457330998,0,0,0.213288250535234,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,1.15289268306808,0.754005626400808,1.39269530428806,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.420814919341911,0.126473074248515,0.442830443938806,0.627994911365499,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,1.55025282754142,0.956728611944923,0.983179888294428,1.20879487306127,0.144649058581512,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0.390438744296638,1.93881057959519,0,0,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0.283880170416537,0,0.325773918707152,0.989820737835213,0,0.242780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0,0,0,0,3.06395645178409,0.540183282093931,0.517434735131018,1.92903331528433,1.59606210278046,1.42695054081656,1.97458824722545,0.608929898229199,0,0.21183207086382,0.220528398054962,0,0,0.361877549568935,1.07435109602823,0.820704498725306,1.1659233465194,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0.406638934253697,0.648032044930808,0.209088296014469,0.436725127492355,0.809186078308924,0.495920734352016,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0.576060012515731,0,0.202725215290164,0.410843828659309,1.29920822977795,0,0.39736270956253,0,0.295379054349154,0,0.457240839929999,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,1.71868654031819,0.515559547031063,0,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.31136204275253,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0.760437899670719,1.13175804831646,0.0936415074698824,0.384150914429216,0.114870937911227,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.290692833264657,0.282328141245992,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.591026894253381,0,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.382576664137687,0,0
|short_description=p@chr11:109092479..109092489,-
|short_description=p@chr11:109092479..109092489,-
}}
}}

Latest revision as of 08:54, 5 August 2015

Short description:p@chr11:109092479..109092489, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:109092479..109092489, -
Coexpression cluster:MCL_coexpression_mm9:16
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr11:109092479..109092489-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A259.76
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.54e-2249
neurectoderm3.00e-2164
neural plate3.00e-2164
presumptive neural plate3.00e-2164
ecto-epithelium2.41e-1973
ectoderm-derived structure1.42e-1495
ectoderm1.42e-1495
presumptive ectoderm1.42e-1495
anterior neural tube1.58e-1440
regional part of forebrain2.46e-1339
forebrain2.46e-1339
future forebrain2.46e-1339
neural tube3.16e-1352
neural rod3.16e-1352
future spinal cord3.16e-1352
neural keel3.16e-1352
structure with developmental contribution from neural crest8.02e-1392
regional part of nervous system1.47e-1254
regional part of brain4.45e-1246
brain9.89e-1247
future brain9.89e-1247
diencephalon7.90e-1110
future diencephalon7.90e-1110
central nervous system2.68e-1073
eye6.68e-109
camera-type eye6.68e-109
simple eye6.68e-109
immature eye6.68e-109
ocular region6.68e-109
visual system6.68e-109
face6.68e-109
optic cup6.68e-109
optic vesicle6.68e-109
eye primordium6.68e-109
nervous system6.91e-1075
subdivision of head6.04e-0811
epithelium1.07e-07174
cell layer1.59e-07176
pituitary gland2.23e-078
gland of diencephalon2.23e-078
neuroendocrine gland2.23e-078
gray matter2.50e-0734
sense organ3.27e-0712
sensory system3.27e-0712
entire sense organ system3.27e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:109092479..109092489,-&oldid=3881325"