FFCP PHASE1:Mm9::chr6:136730333..136730350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14917 | |EntrezGene=14917 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UWA6 | |UniProt=Q3UWA6 | ||
|association_with_transcript=-47bp_to_ENSMUST00000032338_5end | |association_with_transcript=-47bp_to_ENSMUST00000032338_5end | ||
|cluster_id=chr6:136730333..136730350,- | |||
|description=CAGE_peak_2_at_Gucy2c_5end | |description=CAGE_peak_2_at_Gucy2c_5end | ||
|id=chr6:136730333..136730350,- | |id=chr6:136730333..136730350,- | ||
|ontology_enrichment_celltype=CL:0002563!1.79e-11!9;CL:0002251!1.79e-11!9;CL:0000239!1.27e-08!6;CL:0000677!1.27e-08!6;CL:0000212!1.27e-08!6;CL:0000584!1.27e-08!6;CL:0000075!3.59e-07!7 | |ontology_enrichment_celltype=CL:0002563!1.79e-11!9;CL:0002251!1.79e-11!9;CL:0000239!1.27e-08!6;CL:0000677!1.27e-08!6;CL:0000212!1.27e-08!6;CL:0000584!1.27e-08!6;CL:0000075!3.59e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.15e-20,9;CL:0002251,9.15e-20,9;CL:0000239,1.57e-14,6;CL:0000677,1.57e-14,6;CL:0000584,1.57e-14,6;CL:0000075,2.52e-12,7;CL:0002076,4.29e-11,15;CL:0000066,4.83e-11,25;CL:0000682,6.49e-08,3;CL:0000223,7.39e-08,20;CL:0002250,7.71e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.13e-25!43;UBERON:0005409!1.02e-22!59;UBERON:0000344!3.46e-18!15;UBERON:0001242!9.42e-16!13;UBERON:0000060!9.42e-16!13;UBERON:0001262!9.42e-16!13;UBERON:0004786!9.42e-16!13;UBERON:0003350!1.79e-11!9;UBERON:0004808!1.79e-11!9;UBERON:0001277!1.79e-11!9;UBERON:0004923!2.31e-09!24;UBERON:0000485!7.12e-09!11;UBERON:0001007!1.25e-08!128;UBERON:0001555!1.25e-08!128;UBERON:0007026!1.25e-08!128;UBERON:0004119!2.74e-08!130;UBERON:0000925!2.74e-08!130;UBERON:0006595!2.74e-08!130;UBERON:0004921!1.66e-07!126;UBERON:0004185!1.66e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!1.13e-25!43;UBERON:0005409!1.02e-22!59;UBERON:0000344!3.46e-18!15;UBERON:0001242!9.42e-16!13;UBERON:0000060!9.42e-16!13;UBERON:0001262!9.42e-16!13;UBERON:0004786!9.42e-16!13;UBERON:0003350!1.79e-11!9;UBERON:0004808!1.79e-11!9;UBERON:0001277!1.79e-11!9;UBERON:0004923!2.31e-09!24;UBERON:0000485!7.12e-09!11;UBERON:0001007!1.25e-08!128;UBERON:0001555!1.25e-08!128;UBERON:0007026!1.25e-08!128;UBERON:0004119!2.74e-08!130;UBERON:0000925!2.74e-08!130;UBERON:0006595!2.74e-08!130;UBERON:0004921!1.66e-07!126;UBERON:0004185!1.66e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.30e-58,31;UBERON:0005409,3.12e-38,47;UBERON:0000344,3.83e-32,15;UBERON:0001242,1.19e-27,13;UBERON:0001262,1.19e-27,13;UBERON:0004786,1.19e-27,13;UBERON:0003350,9.15e-20,9;UBERON:0004808,9.15e-20,9;UBERON:0001277,9.15e-20,9;UBERON:0004923,1.26e-18,24;UBERON:0000485,8.05e-16,11;UBERON:0001007,1.61e-15,116;UBERON:0001555,1.61e-15,116;UBERON:0007026,1.61e-15,116;UBERON:0004119,4.03e-15,118;UBERON:0000925,4.03e-15,118;UBERON:0006595,4.03e-15,118;UBERON:0004921,2.37e-13,114;UBERON:0002108,5.61e-09,4;UBERON:0000331,3.24e-07,3;UBERON:0002116,3.24e-07,3;UBERON:0001204,3.24e-07,3;UBERON:0001168,3.24e-07,3 | |||
|phase1_expression=0,43.9709013625595,31.8499467572675,24.1971369045464,37.567179745976,20.6491504451624,15.4184342793047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2786133711934,28.9055694144634,29.285830169866,23.6919097887491,17.8841123129288,12.5415456841207,14.3657173963161,9.09095093686749,0,0,0,11.2652131702997,7.97926297720763,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4335026387038,26.9739577996815,0.426576501070468,1.62565670302307,4.89696353023955,10.2858597557905,9.78463392917429,6.84812254005213,13.2868137232463,7.41145296258049,6.78605063760728,6.16765063327568,4.09424582950152,15.2799299471218,11.6714546932335,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358117032009409,0.164140899745061,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,3.75883422546199,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,1.44224540067226,0.64183841918363,0,0.25347929989024,0.565879024158229,0.37456602987953,0.384150914429216,0.746661096422973,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,1.4198064492747,0,0.581385666529314,0.188218760830661,0.930760686808441,0.365855945745545,0,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,43.9709013625595,31.8499467572675,24.1971369045464,37.567179745976,20.6491504451624,15.4184342793047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2786133711934,28.9055694144634,29.285830169866,23.6919097887491,17.8841123129288,12.5415456841207,14.3657173963161,9.09095093686749,0,0,0,11.2652131702997,7.97926297720763,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.0914876436024097,0,0,0,0.45839474333043,0,0,0.186399445825301,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4335026387038,26.9739577996815,0.426576501070468,1.62565670302307,4.89696353023955,10.2858597557905,9.78463392917429,6.84812254005213,13.2868137232463,7.41145296258049,6.78605063760728,6.16765063327568,4.09424582950152,15.2799299471218,11.6714546932335,20.3124098719455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358117032009409,0.164140899745061,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648032044930808,0,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,3.75883422546199,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,1.44224540067226,0.64183841918363,0,0.25347929989024,0.565879024158229,0.37456602987953,0.384150914429216,0.746661096422973,0.476293691283074,0.231768651889711,0.192909220463705,0,0.588795680537589,0.342869252385415,1.4198064492747,0,0.581385666529314,0.188218760830661,0.930760686808441,0.365855945745545,0,0.271608227691724,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Gucy2c | |short_description=p2@Gucy2c | ||
}} | }} |
Latest revision as of 20:22, 26 September 2015
Short description: | p2@Gucy2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gucy2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -47bp_to_ENSMUST00000032338_5end |
EntrezGene: | Gucy2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.15e-20 | 9 |
epithelial cell of alimentary canal | 9.15e-20 | 9 |
brush border epithelial cell | 1.57e-14 | 6 |
gut absorptive cell | 1.57e-14 | 6 |
enterocyte | 1.57e-14 | 6 |
columnar/cuboidal epithelial cell | 2.52e-12 | 7 |
endo-epithelial cell | 4.29e-11 | 15 |
epithelial cell | 4.83e-11 | 25 |
M cell of gut | 6.49e-08 | 3 |
endodermal cell | 7.39e-08 | 20 |
intestinal crypt stem cell | 7.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.30e-58 | 31 |
gastrointestinal system | 3.12e-38 | 47 |
mucosa | 3.83e-32 | 15 |
intestinal mucosa | 1.19e-27 | 13 |
wall of intestine | 1.19e-27 | 13 |
gastrointestinal system mucosa | 1.19e-27 | 13 |
epithelium of mucosa | 9.15e-20 | 9 |
gastrointestinal system epithelium | 9.15e-20 | 9 |
intestinal epithelium | 9.15e-20 | 9 |
organ component layer | 1.26e-18 | 24 |
simple columnar epithelium | 8.05e-16 | 11 |
digestive system | 1.61e-15 | 116 |
digestive tract | 1.61e-15 | 116 |
primitive gut | 1.61e-15 | 116 |
endoderm-derived structure | 4.03e-15 | 118 |
endoderm | 4.03e-15 | 118 |
presumptive endoderm | 4.03e-15 | 118 |
subdivision of digestive tract | 2.37e-13 | 114 |
small intestine | 5.61e-09 | 4 |
ileal mucosa | 3.24e-07 | 3 |
ileum | 3.24e-07 | 3 |
mucosa of small intestine | 3.24e-07 | 3 |
wall of small intestine | 3.24e-07 | 3 |