FFCP PHASE1:Mm9::chr4:11685371..11685381,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12557 | |EntrezGene=12557 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=A2AKS7 | |UniProt=A2AKS7 | ||
|association_with_transcript=31bp_to_ENSMUST00000108303_5end | |association_with_transcript=31bp_to_ENSMUST00000108303_5end | ||
|cluster_id=chr4:11685371..11685381,+ | |||
|description=CAGE_peak_2_at_Cdh17_5end | |description=CAGE_peak_2_at_Cdh17_5end | ||
|id=chr4:11685371..11685381,+ | |id=chr4:11685371..11685381,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.15e-10!9;CL:0002251!2.15e-10!9;CL:0000239!9.07e-08!6;CL:0000677!9.07e-08!6;CL:0000212!9.07e-08!6;CL:0000584!9.07e-08!6 | |ontology_enrichment_celltype=CL:0002563!2.15e-10!9;CL:0002251!2.15e-10!9;CL:0000239!9.07e-08!6;CL:0000677!9.07e-08!6;CL:0000212!9.07e-08!6;CL:0000584!9.07e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.95e-17,9;CL:0002251,1.95e-17,9;CL:0000239,1.01e-12,6;CL:0000677,1.01e-12,6;CL:0000584,1.01e-12,6;CL:0000075,8.39e-11,7;CL:0000066,6.50e-10,25;CL:0002076,8.54e-10,15;CL:0000682,1.28e-07,3;CL:0000223,6.06e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.79e-22!59;UBERON:0000160!6.04e-22!43;UBERON:0000344!4.76e-18!15;UBERON:0001242!1.61e-15!13;UBERON:0000060!1.61e-15!13;UBERON:0001262!1.61e-15!13;UBERON:0004786!1.61e-15!13;UBERON:0004923!4.65e-15!24;UBERON:0001007!1.14e-10!128;UBERON:0001555!1.14e-10!128;UBERON:0007026!1.14e-10!128;UBERON:0003350!2.15e-10!9;UBERON:0004808!2.15e-10!9;UBERON:0001277!2.15e-10!9;UBERON:0004119!2.77e-10!130;UBERON:0000925!2.77e-10!130;UBERON:0006595!2.77e-10!130;UBERON:0004921!2.26e-09!126;UBERON:0004185!2.26e-09!126;UBERON:0000485!4.66e-08!11 | |ontology_enrichment_uberon=UBERON:0005409!1.79e-22!59;UBERON:0000160!6.04e-22!43;UBERON:0000344!4.76e-18!15;UBERON:0001242!1.61e-15!13;UBERON:0000060!1.61e-15!13;UBERON:0001262!1.61e-15!13;UBERON:0004786!1.61e-15!13;UBERON:0004923!4.65e-15!24;UBERON:0001007!1.14e-10!128;UBERON:0001555!1.14e-10!128;UBERON:0007026!1.14e-10!128;UBERON:0003350!2.15e-10!9;UBERON:0004808!2.15e-10!9;UBERON:0001277!2.15e-10!9;UBERON:0004119!2.77e-10!130;UBERON:0000925!2.77e-10!130;UBERON:0006595!2.77e-10!130;UBERON:0004921!2.26e-09!126;UBERON:0004185!2.26e-09!126;UBERON:0000485!4.66e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.24e-51,31;UBERON:0005409,8.90e-34,47;UBERON:0000344,3.05e-31,15;UBERON:0001242,1.13e-26,13;UBERON:0001262,1.13e-26,13;UBERON:0004786,1.13e-26,13;UBERON:0004923,4.04e-18,24;UBERON:0003350,1.95e-17,9;UBERON:0004808,1.95e-17,9;UBERON:0001277,1.95e-17,9;UBERON:0000485,5.83e-14,11;UBERON:0001007,9.80e-12,116;UBERON:0001555,9.80e-12,116;UBERON:0007026,9.80e-12,116;UBERON:0004119,2.06e-11,118;UBERON:0000925,2.06e-11,118;UBERON:0006595,2.06e-11,118;UBERON:0002108,1.63e-10,4;UBERON:0004921,7.43e-10,114;UBERON:0000331,1.83e-08,3;UBERON:0002116,1.83e-08,3;UBERON:0001204,1.83e-08,3;UBERON:0001168,1.83e-08,3;UBERON:0002465,1.65e-07,3 | |||
|phase1_expression=0,6.2815573375085,5.91499011206397,3.62957053568196,5.50985302940982,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0.607425802169478,0,4.10100814965709,6.03303507865251,2.54633791078818,0,0.198581902401771,0,13.1193786690593,13.7645568640302,9.18771142584032,6.03066794622705,5.817723282519,17.29213117053,15.1218077855958,14.1907526819395,0,0,0,1.1554064790051,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,10.8424732332053,0,0,1.41754207454303,3.02525286935014,2.89091456998331,3.04361001780095,9.96511029243474,4.77626968699632,2.26201687920243,3.58121649674071,2.33956904542944,7.19055526923377,8.42938394511308,9.16049856970089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0,0.341741761595705,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,5.4438288782553,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.579421629724277,0,0,0,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,6.2815573375085,5.91499011206397,3.62957053568196,5.50985302940982,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0.607425802169478,0,4.10100814965709,6.03303507865251,2.54633791078818,0,0.198581902401771,0,13.1193786690593,13.7645568640302,9.18771142584032,6.03066794622705,5.817723282519,17.29213117053,15.1218077855958,14.1907526819395,0,0,0,1.1554064790051,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,10.8424732332053,0,0,1.41754207454303,3.02525286935014,2.89091456998331,3.04361001780095,9.96511029243474,4.77626968699632,2.26201687920243,3.58121649674071,2.33956904542944,7.19055526923377,8.42938394511308,9.16049856970089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0,0.341741761595705,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,5.4438288782553,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.579421629724277,0,0,0,0,0.354951612318675,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p2@Cdh17 | |short_description=p2@Cdh17 | ||
}} | }} |
Latest revision as of 05:35, 26 September 2015
Short description: | p2@Cdh17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdh17_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 31bp_to_ENSMUST00000108303_5end |
EntrezGene: | Cdh17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.95e-17 | 9 |
epithelial cell of alimentary canal | 1.95e-17 | 9 |
brush border epithelial cell | 1.01e-12 | 6 |
gut absorptive cell | 1.01e-12 | 6 |
enterocyte | 1.01e-12 | 6 |
columnar/cuboidal epithelial cell | 8.39e-11 | 7 |
epithelial cell | 6.50e-10 | 25 |
endo-epithelial cell | 8.54e-10 | 15 |
M cell of gut | 1.28e-07 | 3 |
endodermal cell | 6.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.24e-51 | 31 |
gastrointestinal system | 8.90e-34 | 47 |
mucosa | 3.05e-31 | 15 |
intestinal mucosa | 1.13e-26 | 13 |
wall of intestine | 1.13e-26 | 13 |
gastrointestinal system mucosa | 1.13e-26 | 13 |
organ component layer | 4.04e-18 | 24 |
epithelium of mucosa | 1.95e-17 | 9 |
gastrointestinal system epithelium | 1.95e-17 | 9 |
intestinal epithelium | 1.95e-17 | 9 |
simple columnar epithelium | 5.83e-14 | 11 |
digestive system | 9.80e-12 | 116 |
digestive tract | 9.80e-12 | 116 |
primitive gut | 9.80e-12 | 116 |
endoderm-derived structure | 2.06e-11 | 118 |
endoderm | 2.06e-11 | 118 |
presumptive endoderm | 2.06e-11 | 118 |
small intestine | 1.63e-10 | 4 |
subdivision of digestive tract | 7.43e-10 | 114 |
ileal mucosa | 1.83e-08 | 3 |
ileum | 1.83e-08 | 3 |
mucosa of small intestine | 1.83e-08 | 3 |
wall of small intestine | 1.83e-08 | 3 |
lymphoid system | 1.65e-07 | 3 |