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FFCP PHASE1:Mm9::chr3:137794320..137794345,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17777
|EntrezGene=17777
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=O08601
|UniProt=O08601
|association_with_transcript=0bp_to_ENSMUST00000029805,NM_008642,uc008rmw.2_5end
|association_with_transcript=0bp_to_ENSMUST00000029805,NM_008642,uc008rmw.2_5end
|cluster_id=chr3:137794320..137794345,-
|description=CAGE_peak_1_at_Mttp_5end
|description=CAGE_peak_1_at_Mttp_5end
|id=chr3:137794320..137794345,-
|id=chr3:137794320..137794345,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,1.14e-07,9;CL:0002251,1.14e-07,9;CL:0000066,4.35e-07,25;CL:0000239,6.29e-07,6;CL:0000677,6.29e-07,6;CL:0000584,6.29e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.25e-15!43;UBERON:0005409!1.48e-14!59;UBERON:0004119!5.00e-14!130;UBERON:0000925!5.00e-14!130;UBERON:0006595!5.00e-14!130;UBERON:0001007!1.80e-13!128;UBERON:0001555!1.80e-13!128;UBERON:0007026!1.80e-13!128;UBERON:0004921!1.96e-12!126;UBERON:0004185!1.96e-12!126;UBERON:0009854!1.73e-11!23;UBERON:0009856!1.73e-11!23;UBERON:0002107!2.86e-11!22;UBERON:0007499!2.86e-11!22;UBERON:0006925!2.86e-11!22;UBERON:0009497!2.86e-11!22;UBERON:0000015!2.86e-11!22;UBERON:0002423!2.86e-11!22;UBERON:0006235!2.86e-11!22;UBERON:0008835!2.86e-11!22;UBERON:0003894!2.86e-11!22;UBERON:0004161!2.86e-11!22;UBERON:0008836!2.86e-11!22;UBERON:0000344!1.85e-10!15;UBERON:0001242!3.79e-09!13;UBERON:0000060!3.79e-09!13;UBERON:0001262!3.79e-09!13;UBERON:0004786!3.79e-09!13;UBERON:0002365!9.12e-09!25;UBERON:0002330!9.12e-09!25;UBERON:0005172!7.22e-08!49;UBERON:0005173!7.22e-08!49;UBERON:0002417!7.22e-08!49;UBERON:0000916!7.22e-08!49;UBERON:0004923!1.31e-07!24;UBERON:0003929!7.27e-07!55
|ontology_enrichment_uberon=UBERON:0000160!4.25e-15!43;UBERON:0005409!1.48e-14!59;UBERON:0004119!5.00e-14!130;UBERON:0000925!5.00e-14!130;UBERON:0006595!5.00e-14!130;UBERON:0001007!1.80e-13!128;UBERON:0001555!1.80e-13!128;UBERON:0007026!1.80e-13!128;UBERON:0004921!1.96e-12!126;UBERON:0004185!1.96e-12!126;UBERON:0009854!1.73e-11!23;UBERON:0009856!1.73e-11!23;UBERON:0002107!2.86e-11!22;UBERON:0007499!2.86e-11!22;UBERON:0006925!2.86e-11!22;UBERON:0009497!2.86e-11!22;UBERON:0000015!2.86e-11!22;UBERON:0002423!2.86e-11!22;UBERON:0006235!2.86e-11!22;UBERON:0008835!2.86e-11!22;UBERON:0003894!2.86e-11!22;UBERON:0004161!2.86e-11!22;UBERON:0008836!2.86e-11!22;UBERON:0000344!1.85e-10!15;UBERON:0001242!3.79e-09!13;UBERON:0000060!3.79e-09!13;UBERON:0001262!3.79e-09!13;UBERON:0004786!3.79e-09!13;UBERON:0002365!9.12e-09!25;UBERON:0002330!9.12e-09!25;UBERON:0005172!7.22e-08!49;UBERON:0005173!7.22e-08!49;UBERON:0002417!7.22e-08!49;UBERON:0000916!7.22e-08!49;UBERON:0004923!1.31e-07!24;UBERON:0003929!7.27e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-23,31;UBERON:0005409,3.00e-17,47;UBERON:0009854,4.06e-13,23;UBERON:0009856,4.06e-13,23;UBERON:0002107,7.76e-13,22;UBERON:0007499,7.76e-13,22;UBERON:0006925,7.76e-13,22;UBERON:0009497,7.76e-13,22;UBERON:0000015,7.76e-13,22;UBERON:0002423,7.76e-13,22;UBERON:0006235,7.76e-13,22;UBERON:0008835,7.76e-13,22;UBERON:0003894,7.76e-13,22;UBERON:0004161,7.76e-13,22;UBERON:0008836,7.76e-13,22;UBERON:0000344,1.03e-12,15;UBERON:0004119,1.04e-12,118;UBERON:0000925,1.04e-12,118;UBERON:0006595,1.04e-12,118;UBERON:0001007,4.17e-12,116;UBERON:0001555,4.17e-12,116;UBERON:0007026,4.17e-12,116;UBERON:0001242,4.52e-11,13;UBERON:0001262,4.52e-11,13;UBERON:0004786,4.52e-11,13;UBERON:0004921,5.48e-11,114;UBERON:0002365,2.02e-10,25;UBERON:0002330,2.02e-10,25;UBERON:0004923,1.39e-08,24;UBERON:0003350,1.14e-07,9;UBERON:0004808,1.14e-07,9;UBERON:0001277,1.14e-07,9
|phase1_expression=0,2375.47559980113,1848.66190963968,2028.0225368123,2152.34895157945,190.375094348083,217.72698103503,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,669.888274235994,634.087252869658,1325.32737317747,869.277708249013,836.459325286621,695.675738629785,656.28645789486,308.427140321529,0,0,0,20.5084650023405,42.7223038571325,20.2127662699745,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,101.530017483804,121.714868733687,172.165318132464,287.20117651187,245.070707242243,102.664871116311,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,1.01104889002957,294.366041915737,0,0.890652834388949,1.21439728736295,4.56698217468212,5.5347719341454,2.41156224884196,3.29248379979973,1.88499886994513,57.3492325143747,0.289198713839823,0,0,0.220841518460394,0,11.1835056730873,0,0,835.855484642511,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,1.35634336052144,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0,0,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0,0,0,0.292399974850665,0.219550115291051,0,0,0,2157.6346528842,2386.93081470515,0.639864751605702,1.16118335930219,59.1501647468408,409.215871460762,658.461387824661,1019.4191303372,883.573112595881,1797.35969290313,880.175901218544,881.77508408638,726.631152692961,864.664271125361,735.517783723584,759.923098738665,0,1.37098215131675,0,0.203651327845314,0.387904974335251,0.911765658574141,0.69560190836683,2.50937251565324,1.255989822731,3.82531208157582,197.733902267128,12.6802280344231,23.5870794135844,27.2083155985673,29.2118574799444,43.1707115956826,70.7859867952347,83.4318798607351,119.331526906426,133.16228539622,116.452247287157,117.596539463247,123.254880880251,125.784281217662,183.344156619394,157.759031485821,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.95872164033981,0.162886959353576,0,0,0.971122544619926,0.604647113929502,0.754420319023592,0,0.307435147943927,312.698234733548,0,1.06949213515416,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,8.21350978222986,5.08396970073168,0,0,0,0,0,0,872.693624869773,0,0,0,0.740778109478847,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,2.43983360552218,40.0699814448883,16.3088870891286,77.3003475661469,10.6542833644008,21.655205400038,0.523511883968059,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,2.8644964665669,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.865906574762965,0.116876902181569,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.19707462020309,3.75613932659095,9.23805524859517,3.77303692730368,9.00833191405069,49.3387735719586,48.0061683366624,60.0118921936695,44.4747092704284,56.5258838755235,46.967959005133,41.8577538390374,43.3450281780965,39.5156026414619,50.4871312760058,35.8082567169603,40.7038455178418,38.3239887747075,45.7788641617976,58.630642157906,48.8058466938178,48.1641103693588,45.7841212391835,47.242908968496,48.3149411061473,44.8173533538293,45.7741297901847,46.0375945937471,44.3302394609613,41.5222563434609,37.1361898555874,36.0123317989327,44.0020628968143,36.4593494754357,0,73.6884566603036,106.790913862004,0,1.76473135295612,0.231867835620421
|phase1_expression=0,2375.47559980113,1848.66190963968,2028.0225368123,2152.34895157945,190.375094348083,217.72698103503,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,669.888274235994,634.087252869658,1325.32737317747,869.277708249013,836.459325286621,695.675738629785,656.28645789486,308.427140321529,0,0,0,20.5084650023405,42.7223038571325,20.2127662699745,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,101.530017483804,121.714868733687,172.165318132464,287.20117651187,245.070707242243,102.664871116311,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,1.01104889002957,294.366041915737,0,0.890652834388949,1.21439728736295,4.56698217468212,5.5347719341454,2.41156224884196,3.29248379979973,1.88499886994513,57.3492325143747,0.289198713839823,0,0,0.220841518460394,0,11.1835056730873,0,0,835.855484642511,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,1.35634336052144,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0,0,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0,0,0,0.292399974850665,0.219550115291051,0,0,0,2157.6346528842,2386.93081470515,0.639864751605702,1.16118335930219,59.1501647468408,409.215871460762,658.461387824661,1019.4191303372,883.573112595881,1797.35969290313,880.175901218544,881.77508408638,726.631152692961,864.664271125361,735.517783723584,759.923098738665,0,1.37098215131675,0,0.203651327845314,0.387904974335251,0.911765658574141,0.69560190836683,2.50937251565324,1.255989822731,3.82531208157582,197.733902267128,12.6802280344231,23.5870794135844,27.2083155985673,29.2118574799444,43.1707115956826,70.7859867952347,83.4318798607351,119.331526906426,133.16228539622,116.452247287157,117.596539463247,123.254880880251,125.784281217662,183.344156619394,157.759031485821,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,1.95872164033981,0.162886959353576,0,0,0.971122544619926,0.604647113929502,0.754420319023592,0,0.307435147943927,312.698234733548,0,1.06949213515416,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0,0,8.21350978222986,5.08396970073168,0,0,0,0,0,0,872.693624869773,0,0,0,0.740778109478847,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,2.43983360552218,40.0699814448883,16.3088870891286,77.3003475661469,10.6542833644008,21.655205400038,0.523511883968059,0.129614973291793,0,0.56369293868419,0,0,0,0.129159823477731,0,0.117357238645754,2.8644964665669,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.865906574762965,0.116876902181569,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,1.19707462020309,3.75613932659095,9.23805524859517,3.77303692730368,9.00833191405069,49.3387735719586,48.0061683366624,60.0118921936695,44.4747092704284,56.5258838755235,46.967959005133,41.8577538390374,43.3450281780965,39.5156026414619,50.4871312760058,35.8082567169603,40.7038455178418,38.3239887747075,45.7788641617976,58.630642157906,48.8058466938178,48.1641103693588,45.7841212391835,47.242908968496,48.3149411061473,44.8173533538293,45.7741297901847,46.0375945937471,44.3302394609613,41.5222563434609,37.1361898555874,36.0123317989327,44.0020628968143,36.4593494754357,0,73.6884566603036,106.790913862004,0,1.76473135295612,0.231867835620421
|short_description=p1@Mttp
|short_description=p1@Mttp
}}
}}

Latest revision as of 16:39, 1 October 2015

Short description:p1@Mttp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mttp_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000029805, NM_008642, uc008rmw.2_5end
EntrezGene:Mttp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mttp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52375.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61848.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I32028.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42152.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7190.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8217.73
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1669.89
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2634.09
GP2+ M cell, pool1.CNhs13228.11845-124H91325.33
GP2+ M cell, pool2.CNhs13231.11846-124I1869.28
GP2+ M cell, pool3.CNhs13240.11847-124I2836.46
Ileum epithelium, pool1.CNhs13199.10252-104B9695.68
Ileum epithelium, pool2.CNhs13232.10253-104C1656.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8308.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F642.72
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7101.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C4121.71
Mouse hepatocyte, donor3.CNhs12615.11637-122C8172.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F4287.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F6245.07
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7102.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6294.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A857.35
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H7835.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32157.63
intestine, adult.CNhs10496.178-9A32386.93
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D859.15
intestine, embryo E16.CNhs10585.463-22H4409.22
intestine, embryo E17.CNhs10582.482-18D3658.46
intestine, embryo E18.CNhs10526.1289-20F71019.42
intestine, neonate N00.CNhs11126.644-26D1883.57
intestine, neonate N01.CNhs11192.1322-23E91797.36
intestine, neonate N06.CNhs11102.688-20B8880.18
intestine, neonate N07.CNhs11095.720-20F2881.78
intestine, neonate N10.CNhs11098.755-23A5726.63
intestine, neonate N20.CNhs11187.827-18D1864.66
intestine, neonate N25.CNhs11121.1352-25E3735.52
intestine, neonate N30.CNhs11131.1384-42G1759.92
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B2197.73
liver, embryo E12.CNhs10601.355-15F812.68
liver, embryo E13.CNhs10524.378-3H623.59
liver, embryo E14.CNhs10594.409-16E127.21
liver, embryo E15.CNhs10520.433-16D729.21
liver, embryo E16.CNhs10523.462-17F543.17
liver, embryo E17.CNhs10510.481-18A370.79
liver, embryo E18.CNhs10579.499-43G483.43
liver, neonate N00.CNhs11117.641-24F4119.33
liver, neonate N03.CNhs11123.1345-25G2133.16
liver, neonate N06.CNhs11101.684-20A8116.45
liver, neonate N07.CNhs11103.716-20H2117.60
liver, neonate N10.CNhs11115.751-24B9123.25
liver, neonate N20.CNhs11220.823-25A3125.78
liver, neonate N25.CNhs11198.1368-26H1183.34
liver, neonate N30.CNhs11106.1382-42D1157.76
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G9312.70
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I78.21
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I1872.69
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D440.07
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C677.30
stomach, neonate N03.CNhs11193.1340-24B810.65
stomach, neonate N07.CNhs11210.718-18A921.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G549.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G548.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G560.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G544.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G556.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G546.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G541.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G543.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G550.49
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G540.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G545.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G558.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G548.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G545.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.24
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G548.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G544.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G545.77
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G546.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G544.33
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G544.00
whole body, embryo E17.5.CNhs10513.490-9F936.46
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B373.69
whole body, neonate N00.CNhs10525.657-19C2106.79
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.14e-079
epithelial cell of alimentary canal1.14e-079
epithelial cell4.35e-0725
brush border epithelial cell6.29e-076
gut absorptive cell6.29e-076
enterocyte6.29e-076

Uber anatomy
Ontology termp-valuen
intestine1.14e-2331
gastrointestinal system3.00e-1747
digestive tract diverticulum4.06e-1323
sac4.06e-1323
liver7.76e-1322
epithelial sac7.76e-1322
digestive gland7.76e-1322
epithelium of foregut-midgut junction7.76e-1322
anatomical boundary7.76e-1322
hepatobiliary system7.76e-1322
foregut-midgut junction7.76e-1322
hepatic diverticulum7.76e-1322
liver primordium7.76e-1322
septum transversum7.76e-1322
liver bud7.76e-1322
mucosa1.03e-1215
endoderm-derived structure1.04e-12118
endoderm1.04e-12118
presumptive endoderm1.04e-12118
digestive system4.17e-12116
digestive tract4.17e-12116
primitive gut4.17e-12116
intestinal mucosa4.52e-1113
wall of intestine4.52e-1113
gastrointestinal system mucosa4.52e-1113
subdivision of digestive tract5.48e-11114
exocrine gland2.02e-1025
exocrine system2.02e-1025
organ component layer1.39e-0824
epithelium of mucosa1.14e-079
gastrointestinal system epithelium1.14e-079
intestinal epithelium1.14e-079
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