FFCP PHASE1:Mm9::chr3:129604349..129604384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12368 | |EntrezGene=12368 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000137314_5end | |association_with_transcript=0bp_to_ENSMUST00000137314_5end | ||
|cluster_id=chr3:129604349..129604384,+ | |||
|description=CAGE_peak_1_at_Casp6_5end | |description=CAGE_peak_1_at_Casp6_5end | ||
|id=chr3:129604349..129604384,+ | |id=chr3:129604349..129604384,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.89e-10!25;CL:0002076!1.27e-08!15;CL:0000223!1.96e-07!20;CL:0002563!7.12e-07!9;CL:0002251!7.12e-07!9 | |ontology_enrichment_celltype=CL:0000066!6.89e-10!25;CL:0002076!1.27e-08!15;CL:0000223!1.96e-07!20;CL:0002563!7.12e-07!9;CL:0002251!7.12e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.88e-10,25;CL:0002076,1.27e-08,15;CL:0000223,1.96e-07,20;CL:0002563,7.11e-07,9;CL:0002251,7.11e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.60e-19!128;UBERON:0001555!3.60e-19!128;UBERON:0007026!3.60e-19!128;UBERON:0004119!8.46e-19!130;UBERON:0000925!8.46e-19!130;UBERON:0006595!8.46e-19!130;UBERON:0004921!5.73e-18!126;UBERON:0004185!5.73e-18!126;UBERON:0005409!1.61e-10!59;UBERON:0005911!1.02e-09!69;UBERON:0000160!3.06e-09!43;UBERON:0000344!5.91e-08!15;UBERON:0000485!2.03e-07!11;UBERON:0000926!2.28e-07!193;UBERON:0004120!2.28e-07!193;UBERON:0006603!2.28e-07!193;UBERON:0001004!4.78e-07!42;UBERON:0003104!4.82e-07!131;UBERON:0009142!4.82e-07!131;UBERON:0000490!5.65e-07!66;UBERON:0003350!7.12e-07!9;UBERON:0004808!7.12e-07!9;UBERON:0001277!7.12e-07!9;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | |ontology_enrichment_uberon=UBERON:0001007!3.60e-19!128;UBERON:0001555!3.60e-19!128;UBERON:0007026!3.60e-19!128;UBERON:0004119!8.46e-19!130;UBERON:0000925!8.46e-19!130;UBERON:0006595!8.46e-19!130;UBERON:0004921!5.73e-18!126;UBERON:0004185!5.73e-18!126;UBERON:0005409!1.61e-10!59;UBERON:0005911!1.02e-09!69;UBERON:0000160!3.06e-09!43;UBERON:0000344!5.91e-08!15;UBERON:0000485!2.03e-07!11;UBERON:0000926!2.28e-07!193;UBERON:0004120!2.28e-07!193;UBERON:0006603!2.28e-07!193;UBERON:0001004!4.78e-07!42;UBERON:0003104!4.82e-07!131;UBERON:0009142!4.82e-07!131;UBERON:0000490!5.65e-07!66;UBERON:0003350!7.12e-07!9;UBERON:0004808!7.12e-07!9;UBERON:0001277!7.12e-07!9;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.23e-22,116;UBERON:0001555,3.23e-22,116;UBERON:0007026,3.23e-22,116;UBERON:0004119,9.33e-22,118;UBERON:0000925,9.33e-22,118;UBERON:0006595,9.33e-22,118;UBERON:0004921,6.34e-21,114;UBERON:0005409,1.11e-14,47;UBERON:0000160,1.55e-14,31;UBERON:0005911,1.03e-09,69;UBERON:0000344,5.90e-08,15;UBERON:0001041,7.09e-08,80;UBERON:0000485,2.02e-07,11;UBERON:0001004,4.83e-07,42;UBERON:0000490,5.70e-07,66;UBERON:0003350,7.11e-07,9;UBERON:0004808,7.11e-07,9;UBERON:0001277,7.11e-07,9;UBERON:0001242,9.52e-07,13;UBERON:0001262,9.52e-07,13;UBERON:0004786,9.52e-07,13 | |||
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| ||
|short_description=p1@Casp6 | |short_description=p1@Casp6 | ||
}} | }} |
Latest revision as of 14:36, 1 October 2015
Short description: | p1@Casp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Casp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000137314_5end |
EntrezGene: | Casp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.88e-10 | 25 |
endo-epithelial cell | 1.27e-08 | 15 |
endodermal cell | 1.96e-07 | 20 |
intestinal epithelial cell | 7.11e-07 | 9 |
epithelial cell of alimentary canal | 7.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
digestive system | 3.23e-22 | 116 |
digestive tract | 3.23e-22 | 116 |
primitive gut | 3.23e-22 | 116 |
endoderm-derived structure | 9.33e-22 | 118 |
endoderm | 9.33e-22 | 118 |
presumptive endoderm | 9.33e-22 | 118 |
subdivision of digestive tract | 6.34e-21 | 114 |
gastrointestinal system | 1.11e-14 | 47 |
intestine | 1.55e-14 | 31 |
endo-epithelium | 1.03e-09 | 69 |
mucosa | 5.90e-08 | 15 |
foregut | 7.09e-08 | 80 |
simple columnar epithelium | 2.02e-07 | 11 |
respiratory system | 4.83e-07 | 42 |
unilaminar epithelium | 5.70e-07 | 66 |
epithelium of mucosa | 7.11e-07 | 9 |
gastrointestinal system epithelium | 7.11e-07 | 9 |
intestinal epithelium | 7.11e-07 | 9 |
intestinal mucosa | 9.52e-07 | 13 |
wall of intestine | 9.52e-07 | 13 |
gastrointestinal system mucosa | 9.52e-07 | 13 |