FFCP PHASE1:Mm9::chr1:121970600..121970611,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170706 | |EntrezGene=170706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JJV3 | |UniProt=Q9JJV3 | ||
|association_with_transcript=39bp_to_ENSMUST00000056089_5end | |association_with_transcript=39bp_to_ENSMUST00000056089_5end | ||
|cluster_id=chr1:121970600..121970611,- | |||
|description=CAGE_peak_3_at_Tmem37_5end | |description=CAGE_peak_3_at_Tmem37_5end | ||
|id=chr1:121970600..121970611,- | |id=chr1:121970600..121970611,- | ||
|ontology_enrichment_celltype=CL:0002563!9.43e-10!9;CL:0002251!9.43e-10!9;CL:0000066!3.13e-09!25;CL:0000239!4.31e-08!6;CL:0000677!4.31e-08!6;CL:0000212!4.31e-08!6;CL:0000584!4.31e-08!6;CL:0000223!1.49e-07!20;CL:0000075!9.59e-07!7 | |ontology_enrichment_celltype=CL:0002563!9.43e-10!9;CL:0002251!9.43e-10!9;CL:0000066!3.13e-09!25;CL:0000239!4.31e-08!6;CL:0000677!4.31e-08!6;CL:0000212!4.31e-08!6;CL:0000584!4.31e-08!6;CL:0000223!1.49e-07!20;CL:0000075!9.59e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-10,25;CL:0000682,2.61e-10,3;CL:0000239,7.57e-09,6;CL:0000677,7.57e-09,6;CL:0000584,7.57e-09,6;CL:0000075,1.40e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.86e-18!43;UBERON:0000344!9.04e-16!15;UBERON:0001242!1.10e-13!13;UBERON:0000060!1.10e-13!13;UBERON:0001262!1.10e-13!13;UBERON:0004786!1.10e-13!13;UBERON:0005409!5.45e-13!59;UBERON:0004923!1.51e-10!24;UBERON:0003350!9.43e-10!9;UBERON:0004808!9.43e-10!9;UBERON:0001277!9.43e-10!9;UBERON:0001007!2.46e-08!128;UBERON:0001555!2.46e-08!128;UBERON:0007026!2.46e-08!128;UBERON:0004119!5.19e-08!130;UBERON:0000925!5.19e-08!130;UBERON:0006595!5.19e-08!130;UBERON:0000485!1.48e-07!11;UBERON:0004921!2.56e-07!126;UBERON:0004185!2.56e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!7.86e-18!43;UBERON:0000344!9.04e-16!15;UBERON:0001242!1.10e-13!13;UBERON:0000060!1.10e-13!13;UBERON:0001262!1.10e-13!13;UBERON:0004786!1.10e-13!13;UBERON:0005409!5.45e-13!59;UBERON:0004923!1.51e-10!24;UBERON:0003350!9.43e-10!9;UBERON:0004808!9.43e-10!9;UBERON:0001277!9.43e-10!9;UBERON:0001007!2.46e-08!128;UBERON:0001555!2.46e-08!128;UBERON:0007026!2.46e-08!128;UBERON:0004119!5.19e-08!130;UBERON:0000925!5.19e-08!130;UBERON:0006595!5.19e-08!130;UBERON:0000485!1.48e-07!11;UBERON:0004921!2.56e-07!126;UBERON:0004185!2.56e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.11e-36,31;UBERON:0005409,2.18e-22,47;UBERON:0000344,3.96e-15,15;UBERON:0001007,8.94e-13,116;UBERON:0001555,8.94e-13,116;UBERON:0007026,8.94e-13,116;UBERON:0004119,1.80e-12,118;UBERON:0000925,1.80e-12,118;UBERON:0006595,1.80e-12,118;UBERON:0001242,5.15e-11,13;UBERON:0001262,5.15e-11,13;UBERON:0004786,5.15e-11,13;UBERON:0004921,1.07e-10,114;UBERON:0004923,7.13e-09,24;UBERON:0002108,3.32e-07,4 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,8.46899791659124,5.50985302940982,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.07990149631429,2.06468352960453,4.59385571292016,3.87685796543167,3.01659725760245,2.66032787238923,2.01624103807945,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,2.59910566979068,2.24013443548668,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,4.29544417878937,3.17340679996253,0,0,0.128867461322093,0.80673409849337,1.77902435075896,2.47293313946327,4.2707615539006,7.5761519173045,3.2673577144035,2.98434708061726,2.33956904542944,4.49409704327111,3.24207074812041,3.58454291857861,0,0,0,0,0,0.49095073923223,0.379419222745544,0.295220295959204,0.784993639206874,0.123397163921801,1.1858105083486,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.859484216193193,0,0,0 | |phase1_expression=0,2.79180326111489,3.18499467572675,8.46899791659124,5.50985302940982,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.07990149631429,2.06468352960453,4.59385571292016,3.87685796543167,3.01659725760245,2.66032787238923,2.01624103807945,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,2.59910566979068,2.24013443548668,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0.230615497256059,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,4.29544417878937,3.17340679996253,0,0,0.128867461322093,0.80673409849337,1.77902435075896,2.47293313946327,4.2707615539006,7.5761519173045,3.2673577144035,2.98434708061726,2.33956904542944,4.49409704327111,3.24207074812041,3.58454291857861,0,0,0,0,0,0.49095073923223,0.379419222745544,0.295220295959204,0.784993639206874,0.123397163921801,1.1858105083486,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.859484216193193,0,0,0 | ||
|short_description=p3@Tmem37 | |short_description=p3@Tmem37 | ||
}} | }} |
Latest revision as of 06:22, 26 September 2015
Short description: | p3@Tmem37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem37_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 39bp_to_ENSMUST00000056089_5end |
EntrezGene: | Tmem37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.19e-10 | 25 |
M cell of gut | 2.61e-10 | 3 |
brush border epithelial cell | 7.57e-09 | 6 |
gut absorptive cell | 7.57e-09 | 6 |
enterocyte | 7.57e-09 | 6 |
columnar/cuboidal epithelial cell | 1.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.11e-36 | 31 |
gastrointestinal system | 2.18e-22 | 47 |
mucosa | 3.96e-15 | 15 |
digestive system | 8.94e-13 | 116 |
digestive tract | 8.94e-13 | 116 |
primitive gut | 8.94e-13 | 116 |
endoderm-derived structure | 1.80e-12 | 118 |
endoderm | 1.80e-12 | 118 |
presumptive endoderm | 1.80e-12 | 118 |
intestinal mucosa | 5.15e-11 | 13 |
wall of intestine | 5.15e-11 | 13 |
gastrointestinal system mucosa | 5.15e-11 | 13 |
subdivision of digestive tract | 1.07e-10 | 114 |
organ component layer | 7.13e-09 | 24 |
small intestine | 3.32e-07 | 4 |