FFCP PHASE1:Mm9::chr18:4993793..4993817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225115 | |EntrezGene=225115 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z2X9 | |UniProt=D3Z2X9 | ||
|association_with_transcript=0bp_to_ENSMUST00000153016_5end | |association_with_transcript=0bp_to_ENSMUST00000153016_5end | ||
|cluster_id=chr18:4993793..4993817,+ | |||
|description=CAGE_peak_10_at_Svil_5end | |description=CAGE_peak_10_at_Svil_5end | ||
|id=chr18:4993793..4993817,+ | |id=chr18:4993793..4993817,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.99e-07!9;CL:0002251!3.99e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.99e-07!9;CL:0002251!3.99e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.48e-09,6;CL:0000677,6.48e-09,6;CL:0000584,6.48e-09,6;CL:0000066,1.06e-07,25;CL:0000075,1.95e-07,7;CL:0002563,6.08e-07,9;CL:0002251,6.08e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.70e-21!43;UBERON:0005409!5.62e-17!59;UBERON:0000344!8.06e-12!15;UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0002107!1.29e-10!22;UBERON:0007499!1.29e-10!22;UBERON:0006925!1.29e-10!22;UBERON:0009497!1.29e-10!22;UBERON:0000015!1.29e-10!22;UBERON:0002423!1.29e-10!22;UBERON:0006235!1.29e-10!22;UBERON:0008835!1.29e-10!22;UBERON:0003894!1.29e-10!22;UBERON:0004161!1.29e-10!22;UBERON:0008836!1.29e-10!22;UBERON:0004119!1.52e-10!130;UBERON:0000925!1.52e-10!130;UBERON:0006595!1.52e-10!130;UBERON:0001242!4.87e-10!13;UBERON:0000060!4.87e-10!13;UBERON:0001262!4.87e-10!13;UBERON:0004786!4.87e-10!13;UBERON:0009854!8.24e-10!23;UBERON:0009856!8.24e-10!23;UBERON:0004921!1.52e-09!126;UBERON:0004185!1.52e-09!126;UBERON:0005172!1.10e-08!49;UBERON:0005173!1.10e-08!49;UBERON:0002417!1.10e-08!49;UBERON:0000916!1.10e-08!49;UBERON:0002365!2.06e-08!25;UBERON:0002330!2.06e-08!25;UBERON:0003350!3.99e-07!9;UBERON:0004808!3.99e-07!9;UBERON:0001277!3.99e-07!9;UBERON:0004923!4.37e-07!24 | |ontology_enrichment_uberon=UBERON:0000160!1.70e-21!43;UBERON:0005409!5.62e-17!59;UBERON:0000344!8.06e-12!15;UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0002107!1.29e-10!22;UBERON:0007499!1.29e-10!22;UBERON:0006925!1.29e-10!22;UBERON:0009497!1.29e-10!22;UBERON:0000015!1.29e-10!22;UBERON:0002423!1.29e-10!22;UBERON:0006235!1.29e-10!22;UBERON:0008835!1.29e-10!22;UBERON:0003894!1.29e-10!22;UBERON:0004161!1.29e-10!22;UBERON:0008836!1.29e-10!22;UBERON:0004119!1.52e-10!130;UBERON:0000925!1.52e-10!130;UBERON:0006595!1.52e-10!130;UBERON:0001242!4.87e-10!13;UBERON:0000060!4.87e-10!13;UBERON:0001262!4.87e-10!13;UBERON:0004786!4.87e-10!13;UBERON:0009854!8.24e-10!23;UBERON:0009856!8.24e-10!23;UBERON:0004921!1.52e-09!126;UBERON:0004185!1.52e-09!126;UBERON:0005172!1.10e-08!49;UBERON:0005173!1.10e-08!49;UBERON:0002417!1.10e-08!49;UBERON:0000916!1.10e-08!49;UBERON:0002365!2.06e-08!25;UBERON:0002330!2.06e-08!25;UBERON:0003350!3.99e-07!9;UBERON:0004808!3.99e-07!9;UBERON:0001277!3.99e-07!9;UBERON:0004923!4.37e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.04e-20,31;UBERON:0000344,1.51e-13,15;UBERON:0001242,4.84e-11,13;UBERON:0001262,4.84e-11,13;UBERON:0004786,4.84e-11,13;UBERON:0005409,1.14e-10,47;UBERON:0002107,1.24e-09,22;UBERON:0007499,1.24e-09,22;UBERON:0006925,1.24e-09,22;UBERON:0009497,1.24e-09,22;UBERON:0000015,1.24e-09,22;UBERON:0002423,1.24e-09,22;UBERON:0006235,1.24e-09,22;UBERON:0008835,1.24e-09,22;UBERON:0003894,1.24e-09,22;UBERON:0004161,1.24e-09,22;UBERON:0008836,1.24e-09,22;UBERON:0009854,5.07e-09,23;UBERON:0009856,5.07e-09,23;UBERON:0001007,2.28e-08,116;UBERON:0001555,2.28e-08,116;UBERON:0007026,2.28e-08,116;UBERON:0004119,4.99e-08,118;UBERON:0000925,4.99e-08,118;UBERON:0006595,4.99e-08,118;UBERON:0002365,5.95e-08,25;UBERON:0002330,5.95e-08,25;UBERON:0004921,3.42e-07,114;UBERON:0003350,6.08e-07,9;UBERON:0004808,6.08e-07,9;UBERON:0001277,6.08e-07,9;UBERON:0004923,6.09e-07,24 | |||
|phase1_expression=0,24.7772539423946,13.1949779422965,17.5429242557961,12.5223932486587,12.0873075776561,16.5864974822823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,34.3983709005824,24.5467930741872,15.5042630311055,17.230479846363,18.5305260109865,2.66032787238923,6.30075324399827,7.98229838359097,0,0,0,0.577703239502549,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,2.58127163094416,2.719885334831,5.93673510801599,11.0461990966104,7.6164570806547,2.66844398250329,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,24.7814087237848,3.70230793328962,0.426576501070468,0.232236671860439,1.9330119198314,5.24377164020691,4.44756087689741,3.61428689613862,7.59246498471219,1.81168850196412,3.01602250560323,2.18852119245266,0.58489226135736,5.39291645192533,9.29393614461185,12.3467589417708,0,0.456994050438915,1.1270773567308,0.203651327845314,0.387904974335251,0.841629838683823,2.97211724484009,8.70899873079653,8.63493003127561,6.66344685177723,5.92905254174298,1.16791574001266,0.982794975566015,0.449724224769707,2.84004169943904,2.41177159752417,5.34714288740982,3.74004978686054,0.324270453550071,0,1.43768206527355,1.11642284300551,0.312037673114561,2.27320990152401,7.17589654087649,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,1.21390318077491,1.209294227859,1.50884063804718,1.77181135728464,0.922305443831782,1.03371317267288,5.45300594216258,6.77345018930971,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0,5.53813589596716,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.86404272657441,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,2.00022055021454,2.06035057238894,1.28367683836726,1.76888048234658,0.760437899670719,1.13175804831646,1.03005658216871,0.832326981263301,1.09127391015665,1.90517476513229,1.50649623728312,1.35036454324594,1.23625770240992,1.32479028120958,2.40008476669791,1.24233064311536,1.66905332963125,1.59881058295561,0.658765662907314,1.09998990259179,0.73171189149109,1.8414879800649,1.22223702461276,0,1.66089025373844,0.886540341380071,0.818462086339379,1.23949472948773,1.54325288784913,0,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | |phase1_expression=0,24.7772539423946,13.1949779422965,17.5429242557961,12.5223932486587,12.0873075776561,16.5864974822823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,34.3983709005824,24.5467930741872,15.5042630311055,17.230479846363,18.5305260109865,2.66032787238923,6.30075324399827,7.98229838359097,0,0,0,0.577703239502549,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,2.58127163094416,2.719885334831,5.93673510801599,11.0461990966104,7.6164570806547,2.66844398250329,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30140963567143,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,24.7814087237848,3.70230793328962,0.426576501070468,0.232236671860439,1.9330119198314,5.24377164020691,4.44756087689741,3.61428689613862,7.59246498471219,1.81168850196412,3.01602250560323,2.18852119245266,0.58489226135736,5.39291645192533,9.29393614461185,12.3467589417708,0,0.456994050438915,1.1270773567308,0.203651327845314,0.387904974335251,0.841629838683823,2.97211724484009,8.70899873079653,8.63493003127561,6.66344685177723,5.92905254174298,1.16791574001266,0.982794975566015,0.449724224769707,2.84004169943904,2.41177159752417,5.34714288740982,3.74004978686054,0.324270453550071,0,1.43768206527355,1.11642284300551,0.312037673114561,2.27320990152401,7.17589654087649,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,1.21390318077491,1.209294227859,1.50884063804718,1.77181135728464,0.922305443831782,1.03371317267288,5.45300594216258,6.77345018930971,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.119372344003136,0,5.53813589596716,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.86404272657441,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,2.00022055021454,2.06035057238894,1.28367683836726,1.76888048234658,0.760437899670719,1.13175804831646,1.03005658216871,0.832326981263301,1.09127391015665,1.90517476513229,1.50649623728312,1.35036454324594,1.23625770240992,1.32479028120958,2.40008476669791,1.24233064311536,1.66905332963125,1.59881058295561,0.658765662907314,1.09998990259179,0.73171189149109,1.8414879800649,1.22223702461276,0,1.66089025373844,0.886540341380071,0.818462086339379,1.23949472948773,1.54325288784913,0,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p10@Svil | |short_description=p10@Svil | ||
}} | }} |
Latest revision as of 08:37, 27 September 2015
Short description: | p10@Svil |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Svil_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000153016_5end |
EntrezGene: | Svil |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.48e-09 | 6 |
gut absorptive cell | 6.48e-09 | 6 |
enterocyte | 6.48e-09 | 6 |
epithelial cell | 1.06e-07 | 25 |
columnar/cuboidal epithelial cell | 1.95e-07 | 7 |
intestinal epithelial cell | 6.08e-07 | 9 |
epithelial cell of alimentary canal | 6.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.04e-20 | 31 |
mucosa | 1.51e-13 | 15 |
intestinal mucosa | 4.84e-11 | 13 |
wall of intestine | 4.84e-11 | 13 |
gastrointestinal system mucosa | 4.84e-11 | 13 |
gastrointestinal system | 1.14e-10 | 47 |
liver | 1.24e-09 | 22 |
epithelial sac | 1.24e-09 | 22 |
digestive gland | 1.24e-09 | 22 |
epithelium of foregut-midgut junction | 1.24e-09 | 22 |
anatomical boundary | 1.24e-09 | 22 |
hepatobiliary system | 1.24e-09 | 22 |
foregut-midgut junction | 1.24e-09 | 22 |
hepatic diverticulum | 1.24e-09 | 22 |
liver primordium | 1.24e-09 | 22 |
septum transversum | 1.24e-09 | 22 |
liver bud | 1.24e-09 | 22 |
digestive tract diverticulum | 5.07e-09 | 23 |
sac | 5.07e-09 | 23 |
digestive system | 2.28e-08 | 116 |
digestive tract | 2.28e-08 | 116 |
primitive gut | 2.28e-08 | 116 |
endoderm-derived structure | 4.99e-08 | 118 |
endoderm | 4.99e-08 | 118 |
presumptive endoderm | 4.99e-08 | 118 |
exocrine gland | 5.95e-08 | 25 |
exocrine system | 5.95e-08 | 25 |
subdivision of digestive tract | 3.42e-07 | 114 |
epithelium of mucosa | 6.08e-07 | 9 |
gastrointestinal system epithelium | 6.08e-07 | 9 |
intestinal epithelium | 6.08e-07 | 9 |
organ component layer | 6.09e-07 | 24 |