FFCP PHASE1:Mm9::chr3:95985079..95985090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64051 | |EntrezGene=64051 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JIS5 | |UniProt=Q9JIS5 | ||
|association_with_transcript=5bp_to_ENSMUST00000035371_5end | |association_with_transcript=5bp_to_ENSMUST00000035371_5end | ||
|cluster_id=chr3:95985079..95985090,+ | |||
|description=CAGE_peak_2_at_Sv2a_5end | |description=CAGE_peak_2_at_Sv2a_5end | ||
|id=chr3:95985079..95985090,+ | |id=chr3:95985079..95985090,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000540!5.63e-18!33;CL:0000047!5.63e-18!33;CL:0000031!5.63e-18!33;CL:0000404!5.63e-18!33;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0002319!1.57e-15!43;CL:0000393!3.01e-13!39;CL:0000211!3.01e-13!39;CL:0000055!1.91e-11!50 | |ontology_enrichment_celltype=CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000540!5.63e-18!33;CL:0000047!5.63e-18!33;CL:0000031!5.63e-18!33;CL:0000404!5.63e-18!33;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0002319!1.57e-15!43;CL:0000393!3.01e-13!39;CL:0000211!3.01e-13!39;CL:0000055!1.91e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.87e-44,23;CL:0000337,8.87e-44,23;CL:0000540,1.47e-28,33;CL:0000047,1.47e-28,33;CL:0000031,1.47e-28,33;CL:0000404,1.47e-28,33;CL:0000393,3.48e-23,39;CL:0000211,3.48e-23,39;CL:0002319,1.93e-20,43;CL:0000221,7.84e-20,44;CL:0000133,7.84e-20,44;CL:0002609,1.99e-10,6;CL:0002321,3.39e-10,70;CL:0002610,1.45e-07,3;CL:0002614,2.45e-07,3;CL:0002613,2.96e-07,3;CL:0000120,3.10e-07,3;CL:0002612,4.09e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.86e-34!73;UBERON:0005743!2.86e-34!73;UBERON:0000073!1.25e-32!75;UBERON:0001016!1.25e-32!75;UBERON:0002346!1.64e-29!71;UBERON:0003075!1.64e-29!71;UBERON:0007284!1.64e-29!71;UBERON:0004121!2.44e-29!102;UBERON:0000924!2.44e-29!102;UBERON:0006601!2.44e-29!102;UBERON:0001049!4.03e-28!52;UBERON:0005068!4.03e-28!52;UBERON:0006241!4.03e-28!52;UBERON:0007135!4.03e-28!52;UBERON:0000033!1.04e-26!63;UBERON:0000955!1.69e-26!50;UBERON:0006238!1.69e-26!50;UBERON:0002616!1.21e-25!49;UBERON:0003056!1.68e-21!49;UBERON:0002020!4.44e-21!34;UBERON:0003080!1.99e-20!40;UBERON:0002780!8.35e-20!39;UBERON:0001890!8.35e-20!39;UBERON:0006240!8.35e-20!39;UBERON:0002791!1.03e-16!29;UBERON:0003528!1.03e-16!29;UBERON:0001893!1.03e-16!29;UBERON:0007811!2.84e-16!86;UBERON:0000153!7.33e-14!94;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0003076!3.84e-08!12;UBERON:0003057!3.84e-08!12;UBERON:0002420!3.96e-08!8;UBERON:0007245!3.96e-08!8;UBERON:0010009!3.96e-08!8;UBERON:0010011!3.96e-08!8;UBERON:0000454!3.96e-08!8;UBERON:0002619!1.08e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!2.86e-34!73;UBERON:0005743!2.86e-34!73;UBERON:0000073!1.25e-32!75;UBERON:0001016!1.25e-32!75;UBERON:0002346!1.64e-29!71;UBERON:0003075!1.64e-29!71;UBERON:0007284!1.64e-29!71;UBERON:0004121!2.44e-29!102;UBERON:0000924!2.44e-29!102;UBERON:0006601!2.44e-29!102;UBERON:0001049!4.03e-28!52;UBERON:0005068!4.03e-28!52;UBERON:0006241!4.03e-28!52;UBERON:0007135!4.03e-28!52;UBERON:0000033!1.04e-26!63;UBERON:0000955!1.69e-26!50;UBERON:0006238!1.69e-26!50;UBERON:0002616!1.21e-25!49;UBERON:0003056!1.68e-21!49;UBERON:0002020!4.44e-21!34;UBERON:0003080!1.99e-20!40;UBERON:0002780!8.35e-20!39;UBERON:0001890!8.35e-20!39;UBERON:0006240!8.35e-20!39;UBERON:0002791!1.03e-16!29;UBERON:0003528!1.03e-16!29;UBERON:0001893!1.03e-16!29;UBERON:0007811!2.84e-16!86;UBERON:0000153!7.33e-14!94;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0003076!3.84e-08!12;UBERON:0003057!3.84e-08!12;UBERON:0002420!3.96e-08!8;UBERON:0007245!3.96e-08!8;UBERON:0010009!3.96e-08!8;UBERON:0010011!3.96e-08!8;UBERON:0000454!3.96e-08!8;UBERON:0002619!1.08e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.06e-50,54;UBERON:0001017,1.85e-46,73;UBERON:0002020,6.17e-46,34;UBERON:0001049,1.18e-45,52;UBERON:0005068,1.18e-45,52;UBERON:0006241,1.18e-45,52;UBERON:0007135,1.18e-45,52;UBERON:0001016,5.84e-45,75;UBERON:0000955,1.74e-36,47;UBERON:0006238,1.74e-36,47;UBERON:0003528,4.90e-36,29;UBERON:0002791,4.90e-36,29;UBERON:0001893,4.90e-36,29;UBERON:0002346,2.16e-35,64;UBERON:0003075,2.16e-35,64;UBERON:0007284,2.16e-35,64;UBERON:0002616,8.65e-35,46;UBERON:0004121,1.95e-33,95;UBERON:0000924,1.95e-33,95;UBERON:0006601,1.95e-33,95;UBERON:0003080,7.63e-31,40;UBERON:0010371,6.59e-30,73;UBERON:0002780,1.53e-29,39;UBERON:0001890,1.53e-29,39;UBERON:0006240,1.53e-29,39;UBERON:0003056,7.49e-24,49;UBERON:0010314,7.47e-22,92;UBERON:0000956,2.46e-21,21;UBERON:0001869,2.46e-21,21;UBERON:0000203,2.46e-21,21;UBERON:0002420,2.62e-16,8;UBERON:0007245,2.62e-16,8;UBERON:0010009,2.62e-16,8;UBERON:0010011,2.62e-16,8;UBERON:0000454,2.62e-16,8;UBERON:0000025,6.94e-16,114;UBERON:0002619,1.22e-15,17;UBERON:0003076,1.13e-14,12;UBERON:0003057,1.13e-14,12;UBERON:0004111,2.99e-14,122;UBERON:0002240,2.05e-12,6;UBERON:0005174,2.05e-12,6;UBERON:0001137,2.05e-12,6;UBERON:0011216,2.81e-11,194;UBERON:0001948,5.59e-11,5;UBERON:0002315,5.59e-11,5;UBERON:0002021,5.92e-11,10;UBERON:0000411,5.92e-11,10;UBERON:0001950,5.92e-11,10;UBERON:0000369,1.46e-10,5;UBERON:0002435,1.46e-10,5;UBERON:0000204,1.46e-10,5;UBERON:0010082,1.46e-10,5;UBERON:0002950,1.62e-08,4;UBERON:0001891,1.62e-08,4;UBERON:0009616,1.62e-08,4;UBERON:0010286,1.62e-08,4;UBERON:0004684,1.45e-07,3;UBERON:0002275,1.45e-07,3;UBERON:0002038,2.45e-07,3;UBERON:0009663,2.45e-07,3;UBERON:0009661,2.45e-07,3;UBERON:0000125,2.45e-07,3;UBERON:0002308,2.45e-07,3;UBERON:0000483,2.52e-07,174;UBERON:0000119,3.83e-07,176;UBERON:0002257,4.09e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,6.67644320836673,5.81890077199236,5.70448263155561,0,0,0,0,0,0.299600110518405,0.384218305321555,2.59224030771194,2.8351247049655,2.10324961351382,11.1403883917483,5.52171352379034,1.71487118900936,3.25874601462004,2.75765635983006,9.91042928994498,6.76742891851495,8.90917892886212,3.42904348098504,7.22752384459036,10.4182674111352,5.862842979029,9.56696437053856,5.65353516774197,5.59794312399969,7.97281412474976,5.03278503728312,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,2.04946557908083,3.35114730901528,0,0,0,0,1.3481157546434,3.20250421973039,5.15182843662744,1.91206752211504,2.30143911597297,1.66230435647648,2.10913641988085,0.305518091550949,0.124406970610093,0,0.420883711772948,0,0.919608417733892,0,0.30140963567143,0.95251098811859,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,2.52347938276953,1.9551876352064,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,2.10981035865966,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0,0,4.17717711348349,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.857348140126369,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.41052892613663,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0,0,0,0,3.3885110557024,4.14292712856459,1.71868654031819,5.15559547031063,1.37016503954128,0,3.37511250115903,0,2.71885445390523,3.62432218226274,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.256100609619477,0.516919220600519,0.476293691283074,1.15884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421 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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,6.67644320836673,5.81890077199236,5.70448263155561,0,0,0,0,0,0.299600110518405,0.384218305321555,2.59224030771194,2.8351247049655,2.10324961351382,11.1403883917483,5.52171352379034,1.71487118900936,3.25874601462004,2.75765635983006,9.91042928994498,6.76742891851495,8.90917892886212,3.42904348098504,7.22752384459036,10.4182674111352,5.862842979029,9.56696437053856,5.65353516774197,5.59794312399969,7.97281412474976,5.03278503728312,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,2.04946557908083,3.35114730901528,0,0,0,0,1.3481157546434,3.20250421973039,5.15182843662744,1.91206752211504,2.30143911597297,1.66230435647648,2.10913641988085,0.305518091550949,0.124406970610093,0,0.420883711772948,0,0.919608417733892,0,0.30140963567143,0.95251098811859,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,2.52347938276953,1.9551876352064,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,2.10981035865966,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0,0,4.17717711348349,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.857348140126369,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.41052892613663,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0,0,0,0,3.3885110557024,4.14292712856459,1.71868654031819,5.15559547031063,1.37016503954128,0,3.37511250115903,0,2.71885445390523,3.62432218226274,0.207574695168353,0,0.512200817262403,0.243106717068294,0,0.551530525350042,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.256100609619477,0.516919220600519,0.476293691283074,1.15884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Sv2a | |short_description=p2@Sv2a | ||
}} | }} |
Latest revision as of 00:15, 26 September 2015
Short description: | p2@Sv2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sv2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 5bp_to_ENSMUST00000035371_5end |
EntrezGene: | Sv2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.87e-44 | 23 |
neuroblast (sensu Vertebrata) | 8.87e-44 | 23 |
neuron | 1.47e-28 | 33 |
neuronal stem cell | 1.47e-28 | 33 |
neuroblast | 1.47e-28 | 33 |
electrically signaling cell | 1.47e-28 | 33 |
electrically responsive cell | 3.48e-23 | 39 |
electrically active cell | 3.48e-23 | 39 |
neural cell | 1.93e-20 | 43 |
ectodermal cell | 7.84e-20 | 44 |
neurectodermal cell | 7.84e-20 | 44 |
neuron of cerebral cortex | 1.99e-10 | 6 |
embryonic cell | 3.39e-10 | 70 |
raphe nuclei neuron | 1.45e-07 | 3 |
neuron of the substantia nigra | 2.45e-07 | 3 |
striatum neuron | 2.96e-07 | 3 |
granule cell | 3.10e-07 | 3 |
neuron of the ventral spinal cord | 4.09e-07 | 3 |