FFCP PHASE1:Hg19::chr2:185647889..185647893,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:185647889..185647893,+
|short_description=p@chr2:185647889..185647893,+
|description=CAGE_peak_at_chr2:185647889..185647893,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:185647889..185647893,+ | |||
|description=CAGE_peak_at_chr2:185647889..185647893,+ | |||
|id=chr2:185647889..185647893,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.69e-14!63;CL:0000576!5.69e-14!63;CL:0000040!5.69e-14!63;CL:0000559!5.69e-14!63;CL:0000763!1.13e-13!112;CL:0000049!1.13e-13!112;CL:0002009!4.04e-13!65;CL:0000839!6.62e-13!70;CL:0000557!1.59e-12!71;CL:0000860!7.08e-12!45;CL:0000766!9.35e-12!76;CL:0002057!1.04e-11!42;CL:0002032!8.10e-11!165;CL:0000837!8.10e-11!165;CL:0000988!1.21e-09!182;CL:0000037!1.57e-09!172;CL:0000566!1.57e-09!172;CL:0002087!1.24e-08!119;CL:0002031!4.58e-08!124;CL:0000738!2.87e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002504;5.19e-13;3!CL:1000279;5.19e-13;3!CL:1000280;5.19e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.26e-12,3;CL:1000279,1.26e-12,3;CL:1000280,1.26e-12,3;CL:0000988,9.57e-09,177;CL:0002032,3.18e-07,161;CL:0000837,3.18e-07,161;CL:0000763,5.99e-07,108;CL:0000049,5.99e-07,108;CL:0000037,9.93e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.21e-07!51;DOID:0060083!3.21e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.21e-08,51;DOID:0060083,7.21e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.58e-13!34;UBERON:0003528!1.58e-13!34;UBERON:0001869!1.59e-13!32;UBERON:0001049!6.40e-13!57;UBERON:0005068!6.40e-13!57;UBERON:0006241!6.40e-13!57;UBERON:0007135!6.40e-13!57;UBERON:0001893!3.25e-12!34;UBERON:0002791!7.50e-12!33;UBERON:0001017!1.41e-11!82;UBERON:0002616!1.65e-11!59;UBERON:0000955!1.73e-11!69;UBERON:0006238!1.73e-11!69;UBERON:0000073!2.47e-11!94;UBERON:0001016!2.47e-11!94;UBERON:0005743!7.00e-11!86;UBERON:0000956!7.12e-11!25;UBERON:0000203!7.12e-11!25;UBERON:0002619!1.49e-10!22;UBERON:0002371!2.49e-10!80;UBERON:0001474!7.55e-10!86;UBERON:0002780!2.29e-09!41;UBERON:0001890!2.29e-09!41;UBERON:0006240!2.29e-09!41;UBERON:0001950!2.88e-09!20;UBERON:0004765!4.18e-09!101;UBERON:0001434!4.18e-09!101;UBERON:0003080!6.01e-09!42;UBERON:0002390!1.04e-08!102;UBERON:0003061!1.04e-08!102;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002193!4.43e-07!112;UBERON:0002346!7.50e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.02e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-07,17 | |||
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| ||
|short_description=p@chr2:185647889..185647893,+ | |||
}} | }} |
Latest revision as of 04:06, 29 July 2015
Short description: | p@chr2:185647889..185647893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:185647889..185647893, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.26e-12 | 3 |
smooth muscle cell of large intestine | 1.26e-12 | 3 |
smooth muscle cell of colon | 1.26e-12 | 3 |
hematopoietic cell | 9.57e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.18e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-07 | 161 |
myeloid cell | 5.99e-07 | 108 |
common myeloid progenitor | 5.99e-07 | 108 |
hematopoietic stem cell | 9.93e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.20e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.21e-08 | 51 |
immune system cancer | 7.21e-08 | 51 |