FFCP PHASE1:Mm9::chr16:5885363..5885404,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268859 | |EntrezGene=268859 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JJ43 | |UniProt=Q9JJ43 | ||
|association_with_transcript=477bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end | |association_with_transcript=477bp_to_NM_021477,uc007ycb.2,uc007ycc.2,uc012abb.1_5end | ||
|cluster_id=chr16:5885363..5885404,+ | |||
|description=CAGE_peak_10_at_Rbfox1_5end | |description=CAGE_peak_10_at_Rbfox1_5end | ||
|id=chr16:5885363..5885404,+ | |id=chr16:5885363..5885404,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.78e-13!23;CL:0000337!1.78e-13!23;CL:0000540!1.19e-12!33;CL:0000047!1.19e-12!33;CL:0000031!1.19e-12!33;CL:0000404!1.19e-12!33;CL:0000393!4.84e-09!39;CL:0000211!4.84e-09!39;CL:0000221!8.39e-08!44;CL:0000133!8.39e-08!44;CL:0002319!9.83e-08!43 | |ontology_enrichment_celltype=CL:0000117!1.78e-13!23;CL:0000337!1.78e-13!23;CL:0000540!1.19e-12!33;CL:0000047!1.19e-12!33;CL:0000031!1.19e-12!33;CL:0000404!1.19e-12!33;CL:0000393!4.84e-09!39;CL:0000211!4.84e-09!39;CL:0000221!8.39e-08!44;CL:0000133!8.39e-08!44;CL:0002319!9.83e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.91e-19,23;CL:0000337,8.91e-19,23;CL:0000540,1.27e-14,33;CL:0000047,1.27e-14,33;CL:0000031,1.27e-14,33;CL:0000404,1.27e-14,33;CL:0000393,1.40e-11,39;CL:0000211,1.40e-11,39;CL:0002319,4.93e-10,43;CL:0000221,1.08e-09,44;CL:0000133,1.08e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.58e-24!73;UBERON:0005743!4.58e-24!73;UBERON:0000073!1.89e-23!75;UBERON:0001016!1.89e-23!75;UBERON:0002346!6.36e-23!71;UBERON:0003075!6.36e-23!71;UBERON:0007284!6.36e-23!71;UBERON:0001049!3.96e-22!52;UBERON:0005068!3.96e-22!52;UBERON:0006241!3.96e-22!52;UBERON:0007135!3.96e-22!52;UBERON:0000955!4.22e-21!50;UBERON:0006238!4.22e-21!50;UBERON:0004121!2.48e-20!102;UBERON:0000924!2.48e-20!102;UBERON:0006601!2.48e-20!102;UBERON:0002616!3.08e-20!49;UBERON:0002020!1.79e-19!34;UBERON:0000033!3.73e-18!63;UBERON:0003080!3.14e-16!40;UBERON:0002791!4.76e-16!29;UBERON:0003528!4.76e-16!29;UBERON:0001893!4.76e-16!29;UBERON:0002780!1.66e-15!39;UBERON:0001890!1.66e-15!39;UBERON:0006240!1.66e-15!39;UBERON:0003056!3.31e-15!49;UBERON:0000956!1.51e-10!21;UBERON:0001869!1.51e-10!21;UBERON:0000203!1.51e-10!21;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0007811!1.76e-08!86;UBERON:0002619!4.82e-08!17;UBERON:0002420!6.61e-07!8;UBERON:0007245!6.61e-07!8;UBERON:0010009!6.61e-07!8;UBERON:0010011!6.61e-07!8;UBERON:0000454!6.61e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!4.58e-24!73;UBERON:0005743!4.58e-24!73;UBERON:0000073!1.89e-23!75;UBERON:0001016!1.89e-23!75;UBERON:0002346!6.36e-23!71;UBERON:0003075!6.36e-23!71;UBERON:0007284!6.36e-23!71;UBERON:0001049!3.96e-22!52;UBERON:0005068!3.96e-22!52;UBERON:0006241!3.96e-22!52;UBERON:0007135!3.96e-22!52;UBERON:0000955!4.22e-21!50;UBERON:0006238!4.22e-21!50;UBERON:0004121!2.48e-20!102;UBERON:0000924!2.48e-20!102;UBERON:0006601!2.48e-20!102;UBERON:0002616!3.08e-20!49;UBERON:0002020!1.79e-19!34;UBERON:0000033!3.73e-18!63;UBERON:0003080!3.14e-16!40;UBERON:0002791!4.76e-16!29;UBERON:0003528!4.76e-16!29;UBERON:0001893!4.76e-16!29;UBERON:0002780!1.66e-15!39;UBERON:0001890!1.66e-15!39;UBERON:0006240!1.66e-15!39;UBERON:0003056!3.31e-15!49;UBERON:0000956!1.51e-10!21;UBERON:0001869!1.51e-10!21;UBERON:0000203!1.51e-10!21;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0007811!1.76e-08!86;UBERON:0002619!4.82e-08!17;UBERON:0002420!6.61e-07!8;UBERON:0007245!6.61e-07!8;UBERON:0010009!6.61e-07!8;UBERON:0010011!6.61e-07!8;UBERON:0000454!6.61e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.53e-44,54;UBERON:0001049,1.74e-40,52;UBERON:0005068,1.74e-40,52;UBERON:0006241,1.74e-40,52;UBERON:0007135,1.74e-40,52;UBERON:0001017,3.31e-39,73;UBERON:0001016,7.41e-38,75;UBERON:0002020,7.43e-36,34;UBERON:0002346,1.38e-34,64;UBERON:0003075,1.38e-34,64;UBERON:0007284,1.38e-34,64;UBERON:0000955,8.80e-34,47;UBERON:0006238,8.80e-34,47;UBERON:0002616,4.06e-32,46;UBERON:0010371,5.17e-29,73;UBERON:0003528,6.02e-29,29;UBERON:0002791,6.02e-29,29;UBERON:0001893,6.02e-29,29;UBERON:0004121,6.86e-29,95;UBERON:0000924,6.86e-29,95;UBERON:0006601,6.86e-29,95;UBERON:0003080,1.53e-27,40;UBERON:0002780,3.99e-26,39;UBERON:0001890,3.99e-26,39;UBERON:0006240,3.99e-26,39;UBERON:0003056,1.29e-22,49;UBERON:0010314,4.02e-22,92;UBERON:0000956,6.04e-18,21;UBERON:0001869,6.04e-18,21;UBERON:0000203,6.04e-18,21;UBERON:0002021,9.67e-17,10;UBERON:0000411,9.67e-17,10;UBERON:0001950,9.67e-17,10;UBERON:0003076,5.26e-13,12;UBERON:0003057,5.26e-13,12;UBERON:0002619,5.41e-13,17;UBERON:0000025,6.07e-13,114;UBERON:0002420,2.11e-12,8;UBERON:0007245,2.11e-12,8;UBERON:0010009,2.11e-12,8;UBERON:0010011,2.11e-12,8;UBERON:0000454,2.11e-12,8;UBERON:0004111,1.89e-11,122;UBERON:0002240,2.01e-09,6;UBERON:0005174,2.01e-09,6;UBERON:0001137,2.01e-09,6;UBERON:0000369,5.53e-08,5;UBERON:0002435,5.53e-08,5;UBERON:0001948,5.53e-08,5;UBERON:0002315,5.53e-08,5;UBERON:0000204,5.53e-08,5;UBERON:0010082,5.53e-08,5;UBERON:0011216,1.09e-07,194;UBERON:0002950,1.84e-07,4;UBERON:0001891,1.84e-07,4;UBERON:0009616,1.84e-07,4;UBERON:0010286,1.84e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0,0,1.55534418462716,1.4850653216486,1.89292465216244,1.99955689082663,3.97563373712904,0.979926393719632,0.383381884072945,0,5.50579404996943,9.3211756802187,7.52672012955593,2.76961204233407,2.01272815925301,1.04182674111352,5.58365998002762,7.31591393041184,7.94550888439413,2.94628585473668,3.27454865837937,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0,0.247194967734374,0,0,0,0,0,0,11.1256702864388,13.4045892360611,0,0,0,0,6.89036941262184,23.7900313465686,1.7591609295801,10.6032835317289,8.69432554923124,9.97382613885888,13.9527486238272,0.305518091550949,0,0,0.420883711772948,0,0,0,0,0.680364991513279,0.384341160854549,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,12.1968170167194,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.32202974804643,0,0,0.94652465824877,0,1.50796378412959,0.716906393857656,0.668396022247182,1.13230612315533,0.404810701674894,0,0,11.5675673911851,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0,0,0.913394847343798,0,0,0,0,0,0,0,0,0,6.11903496634682,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.258319646955462,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,12.4287813856938,5.15605962095457,4.98374228796694,8.90607275701835,9.82012066606611,4.05013500139084,7.65546045481175,5.89085131679466,8.28416498802912,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0.919217542250071,0.666740183404846,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,1.40462261204824,0.89635213366817,0.746661096422973,0,0.347652977834566,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.182927972872773,0.263069711437843,0.543216455383447,0,0.830445126869219,0.29551344712669,0.818462086339379,0.77468420592983,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0.889294796111139,0,0,0,0,0,1.55534418462716,1.4850653216486,1.89292465216244,1.99955689082663,3.97563373712904,0.979926393719632,0.383381884072945,0,5.50579404996943,9.3211756802187,7.52672012955593,2.76961204233407,2.01272815925301,1.04182674111352,5.58365998002762,7.31591393041184,7.94550888439413,2.94628585473668,3.27454865837937,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.60289056221049,1.41106448562846,0,0.247194967734374,0,0,0,0,0,0,11.1256702864388,13.4045892360611,0,0,0,0,6.89036941262184,23.7900313465686,1.7591609295801,10.6032835317289,8.69432554923124,9.97382613885888,13.9527486238272,0.305518091550949,0,0,0.420883711772948,0,0,0,0,0.680364991513279,0.384341160854549,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,12.1968170167194,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,8.83028244932856,8.32202974804643,0,0,0.94652465824877,0,1.50796378412959,0.716906393857656,0.668396022247182,1.13230612315533,0.404810701674894,0,0,11.5675673911851,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0,0,0.913394847343798,0,0,0,0,0,0,0,0,0,6.11903496634682,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.915112692826091,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.66183396182839,0.388902376688095,0.258319646955462,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.90652579663893,12.4287813856938,5.15605962095457,4.98374228796694,8.90607275701835,9.82012066606611,4.05013500139084,7.65546045481175,5.89085131679466,8.28416498802912,0,0.399024873401031,0.341467211508268,0.486213434136588,0,0.919217542250071,0.666740183404846,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,1.40462261204824,0.89635213366817,0.746661096422973,0,0.347652977834566,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.182927972872773,0.263069711437843,0.543216455383447,0,0.830445126869219,0.29551344712669,0.818462086339379,0.77468420592983,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0 | ||
|short_description=p10@Rbfox1 | |short_description=p10@Rbfox1 | ||
}} | }} |
Latest revision as of 16:53, 25 September 2015
Short description: | p10@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 477bp_to_NM_021477, uc007ycb.2, uc007ycc.2, uc012abb.1_5end |
EntrezGene: | Rbfox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.91e-19 | 23 |
neuroblast (sensu Vertebrata) | 8.91e-19 | 23 |
neuron | 1.27e-14 | 33 |
neuronal stem cell | 1.27e-14 | 33 |
neuroblast | 1.27e-14 | 33 |
electrically signaling cell | 1.27e-14 | 33 |
electrically responsive cell | 1.40e-11 | 39 |
electrically active cell | 1.40e-11 | 39 |
neural cell | 4.93e-10 | 43 |
ectodermal cell | 1.08e-09 | 44 |
neurectodermal cell | 1.08e-09 | 44 |