Personal tools

FFCP PHASE1:Mm9::chr5:137972432..137972464,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14693
|EntrezGene=14693
|HGNC=
|HGNC=
|MCL_coexpression_id=1237
|MCL_coexpression_id=1237
|TSSclassifier=NA
|UniProt=P62880
|UniProt=P62880
|association_with_transcript=60bp_to_ENSMUST00000150063_5end
|association_with_transcript=60bp_to_ENSMUST00000150063_5end
|cluster_id=chr5:137972432..137972464,-
|description=CAGE_peak_15_at_Gnb2_5end
|description=CAGE_peak_15_at_Gnb2_5end
|id=chr5:137972432..137972464,-
|id=chr5:137972432..137972464,-
|ontology_enrichment_celltype=CL:0000117!3.54e-14!23;CL:0000337!3.54e-14!23;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0000055!2.68e-10!50;CL:0002319!8.64e-10!43;CL:0000540!9.82e-10!33;CL:0000047!9.82e-10!33;CL:0000031!9.82e-10!33;CL:0000404!9.82e-10!33;CL:0000221!2.57e-09!44;CL:0000133!2.57e-09!44
|ontology_enrichment_celltype=CL:0000117!3.54e-14!23;CL:0000337!3.54e-14!23;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0000055!2.68e-10!50;CL:0002319!8.64e-10!43;CL:0000540!9.82e-10!33;CL:0000047!9.82e-10!33;CL:0000031!9.82e-10!33;CL:0000404!9.82e-10!33;CL:0000221!2.57e-09!44;CL:0000133!2.57e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,6.09e-33,23;CL:0000337,6.09e-33,23;CL:0000540,6.13e-22,33;CL:0000047,6.13e-22,33;CL:0000031,6.13e-22,33;CL:0000404,6.13e-22,33;CL:0002319,3.19e-18,43;CL:0000393,4.81e-18,39;CL:0000211,4.81e-18,39;CL:0000221,9.98e-18,44;CL:0000133,9.98e-18,44;CL:0002608,8.96e-11,3;CL:0000120,1.04e-10,3;CL:0002613,1.73e-10,3;CL:0002612,5.09e-10,3;CL:0002321,8.12e-10,70;CL:0000723,1.09e-07,91;CL:0000048,1.09e-07,91;CL:0002611,3.99e-07,2;CL:0000034,5.51e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.72e-16!49;UBERON:0002346!3.08e-16!71;UBERON:0003075!3.08e-16!71;UBERON:0007284!3.08e-16!71;UBERON:0001017!3.85e-16!73;UBERON:0005743!3.85e-16!73;UBERON:0001049!4.32e-16!52;UBERON:0005068!4.32e-16!52;UBERON:0006241!4.32e-16!52;UBERON:0007135!4.32e-16!52;UBERON:0000073!9.50e-16!75;UBERON:0001016!9.50e-16!75;UBERON:0003080!3.80e-15!40;UBERON:0002780!1.21e-14!39;UBERON:0001890!1.21e-14!39;UBERON:0006240!1.21e-14!39;UBERON:0004121!1.50e-14!102;UBERON:0000924!1.50e-14!102;UBERON:0006601!1.50e-14!102;UBERON:0000033!8.92e-14!63;UBERON:0002616!2.65e-13!49;UBERON:0002020!2.92e-13!34;UBERON:0000955!9.43e-13!50;UBERON:0006238!9.43e-13!50;UBERON:0002791!1.17e-09!29;UBERON:0003528!1.17e-09!29;UBERON:0001893!1.17e-09!29;UBERON:0002420!1.50e-07!8;UBERON:0007245!1.50e-07!8;UBERON:0010009!1.50e-07!8;UBERON:0010011!1.50e-07!8;UBERON:0000454!1.50e-07!8;UBERON:0000153!2.96e-07!94;UBERON:0007811!4.01e-07!86
|ontology_enrichment_uberon=UBERON:0003056!2.72e-16!49;UBERON:0002346!3.08e-16!71;UBERON:0003075!3.08e-16!71;UBERON:0007284!3.08e-16!71;UBERON:0001017!3.85e-16!73;UBERON:0005743!3.85e-16!73;UBERON:0001049!4.32e-16!52;UBERON:0005068!4.32e-16!52;UBERON:0006241!4.32e-16!52;UBERON:0007135!4.32e-16!52;UBERON:0000073!9.50e-16!75;UBERON:0001016!9.50e-16!75;UBERON:0003080!3.80e-15!40;UBERON:0002780!1.21e-14!39;UBERON:0001890!1.21e-14!39;UBERON:0006240!1.21e-14!39;UBERON:0004121!1.50e-14!102;UBERON:0000924!1.50e-14!102;UBERON:0006601!1.50e-14!102;UBERON:0000033!8.92e-14!63;UBERON:0002616!2.65e-13!49;UBERON:0002020!2.92e-13!34;UBERON:0000955!9.43e-13!50;UBERON:0006238!9.43e-13!50;UBERON:0002791!1.17e-09!29;UBERON:0003528!1.17e-09!29;UBERON:0001893!1.17e-09!29;UBERON:0002420!1.50e-07!8;UBERON:0007245!1.50e-07!8;UBERON:0010009!1.50e-07!8;UBERON:0010011!1.50e-07!8;UBERON:0000454!1.50e-07!8;UBERON:0000153!2.96e-07!94;UBERON:0007811!4.01e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.45e-24,34;UBERON:0001049,1.09e-22,52;UBERON:0005068,1.09e-22,52;UBERON:0006241,1.09e-22,52;UBERON:0007135,1.09e-22,52;UBERON:0001017,1.22e-22,73;UBERON:0001016,6.54e-22,75;UBERON:0000073,1.09e-21,54;UBERON:0002420,1.87e-19,8;UBERON:0007245,1.87e-19,8;UBERON:0010009,1.87e-19,8;UBERON:0010011,1.87e-19,8;UBERON:0000454,1.87e-19,8;UBERON:0002346,1.24e-17,64;UBERON:0003075,1.24e-17,64;UBERON:0007284,1.24e-17,64;UBERON:0002780,1.42e-17,39;UBERON:0001890,1.42e-17,39;UBERON:0006240,1.42e-17,39;UBERON:0003080,4.73e-17,40;UBERON:0000369,7.93e-17,5;UBERON:0002435,7.93e-17,5;UBERON:0000204,7.93e-17,5;UBERON:0010082,7.93e-17,5;UBERON:0004121,2.75e-16,95;UBERON:0000924,2.75e-16,95;UBERON:0006601,2.75e-16,95;UBERON:0001948,1.63e-15,5;UBERON:0002315,1.63e-15,5;UBERON:0010371,6.25e-15,73;UBERON:0002616,2.16e-14,46;UBERON:0000955,5.14e-14,47;UBERON:0006238,5.14e-14,47;UBERON:0003528,7.41e-14,29;UBERON:0002791,7.41e-14,29;UBERON:0001893,7.41e-14,29;UBERON:0003056,2.62e-13,49;UBERON:0002240,6.86e-13,6;UBERON:0005174,6.86e-13,6;UBERON:0001137,6.86e-13,6;UBERON:0010314,5.86e-11,92;UBERON:0002257,5.09e-10,3;UBERON:0000025,5.16e-08,114;UBERON:0004111,3.30e-07,122;UBERON:0002256,3.99e-07,2
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0.515672092277442,1.61853168687678,4.23192783417626,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.311068836925433,0.675029691658453,0,2.28520787523043,1.10434270475807,2.81728838194394,4.02550978276593,1.83843757322004,0,0.383062014255563,0.307213066512487,1.97829431595291,3.93396867490361,1.56274011167028,0.279182999001381,1.68828783009504,1.5279824777681,1.76777151284201,1.13897344639282,2.05039390407831,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,3.66000482254901,9.92669381691629,1.04294592115366,0.511430914660661,0.62336413367868,1.46017136760982,0,0,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.204109497453984,0.512454881139399,0.281105173679186,0,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0.776152102696527,0.428674070063185,1.06404140185364,0.891844088010353,1.15184314421485,1.2178597964584,0,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0.453142408984205,1.55328093525546,0.62272408550506,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,1.4198064492747,0.238436189947321,0,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.464810523557898,0,1.74867404556562,0.233931608445408,0.429742108096597,0,0,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.436050312760893,0.439372365468944,0,0.139986421625363,0,0,0,0,0.514518872071894,0,0.515672092277442,1.61853168687678,4.23192783417626,3.1691570175309,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.311068836925433,0.675029691658453,0,2.28520787523043,1.10434270475807,2.81728838194394,4.02550978276593,1.83843757322004,0,0.383062014255563,0.307213066512487,1.97829431595291,3.93396867490361,1.56274011167028,0.279182999001381,1.68828783009504,1.5279824777681,1.76777151284201,1.13897344639282,2.05039390407831,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,3.66000482254901,9.92669381691629,1.04294592115366,0.511430914660661,0.62336413367868,1.46017136760982,0,0,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.204109497453984,0.512454881139399,0.281105173679186,0,0,0,0.351902248327898,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0.776152102696527,0.428674070063185,1.06404140185364,0.891844088010353,1.15184314421485,1.2178597964584,0,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0.675022500231806,0,0.453142408984205,1.55328093525546,0.62272408550506,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0,0.758091635291392,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,1.4198064492747,0.238436189947321,0,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.464810523557898,0,1.74867404556562,0.233931608445408,0.429742108096597,0,0,0
|short_description=p15@Gnb2
|short_description=p15@Gnb2
}}
}}

Latest revision as of 14:46, 25 September 2015

Short description:p15@Gnb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_15_at_Gnb2_5end
Coexpression cluster:MCL_coexpression_mm9:1237
Association with transcript: 60bp_to_ENSMUST00000150063_5end
EntrezGene:Gnb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p15@Gnb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F19.93
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter6.45e-2434
neural tube1.09e-2252
neural rod1.09e-2252
future spinal cord1.09e-2252
neural keel1.09e-2252
central nervous system1.22e-2273
nervous system6.54e-2275
regional part of nervous system1.09e-2154
basal ganglion1.87e-198
nuclear complex of neuraxis1.87e-198
aggregate regional part of brain1.87e-198
collection of basal ganglia1.87e-198
cerebral subcortex1.87e-198
neurectoderm1.24e-1764
neural plate1.24e-1764
presumptive neural plate1.24e-1764
regional part of forebrain1.42e-1739
forebrain1.42e-1739
future forebrain1.42e-1739
anterior neural tube4.73e-1740
corpus striatum7.93e-175
striatum7.93e-175
ventral part of telencephalon7.93e-175
future corpus striatum7.93e-175
ectoderm-derived structure2.75e-1695
ectoderm2.75e-1695
presumptive ectoderm2.75e-1695
regional part of spinal cord1.63e-155
gray matter of spinal cord1.63e-155
ecto-epithelium6.25e-1573
regional part of brain2.16e-1446
brain5.14e-1447
future brain5.14e-1447
brain grey matter7.41e-1429
regional part of telencephalon7.41e-1429
telencephalon7.41e-1429
pre-chordal neural plate2.62e-1349
spinal cord6.86e-136
dorsal region element6.86e-136
dorsum6.86e-136
structure with developmental contribution from neural crest5.86e-1192
ventral horn of spinal cord5.09e-103
tube5.16e-08114
anatomical conduit3.30e-07122
dorsal horn of spinal cord3.99e-072
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:137972432..137972464,-&oldid=4197369"