Personal tools

FFCP PHASE1:Mm9::chr7:106976854..106976894,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=50877
|EntrezGene=50877
|HGNC=
|HGNC=
|MCL_coexpression_id=527
|MCL_coexpression_id=527
|TSSclassifier=NA
|UniProt=Q9JMH7,Q543I9
|UniProt=Q9JMH7,Q543I9
|association_with_transcript=32bp_to_ENSMUST00000036331,NM_016720,uc009imc.1_5end
|association_with_transcript=32bp_to_ENSMUST00000036331,NM_016720,uc009imc.1_5end
|cluster_id=chr7:106976854..106976894,-
|description=CAGE_peak_1_at_Neu3_5end
|description=CAGE_peak_1_at_Neu3_5end
|id=chr7:106976854..106976894,-
|id=chr7:106976854..106976894,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.03e-09!193;UBERON:0004120!3.03e-09!193;UBERON:0006603!3.03e-09!193;UBERON:0001048!3.14e-08!147;UBERON:0003104!3.48e-08!131;UBERON:0009142!3.48e-08!131;UBERON:0001041!1.12e-07!92;UBERON:0000077!1.48e-07!97;UBERON:0005057!2.98e-07!51;UBERON:0004921!4.39e-07!126;UBERON:0004185!4.39e-07!126;UBERON:0001007!6.07e-07!128;UBERON:0001555!6.07e-07!128;UBERON:0007026!6.07e-07!128
|ontology_enrichment_uberon=UBERON:0000926!3.03e-09!193;UBERON:0004120!3.03e-09!193;UBERON:0006603!3.03e-09!193;UBERON:0001048!3.14e-08!147;UBERON:0003104!3.48e-08!131;UBERON:0009142!3.48e-08!131;UBERON:0001041!1.12e-07!92;UBERON:0000077!1.48e-07!97;UBERON:0005057!2.98e-07!51;UBERON:0004921!4.39e-07!126;UBERON:0004185!4.39e-07!126;UBERON:0001007!6.07e-07!128;UBERON:0001555!6.07e-07!128;UBERON:0007026!6.07e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0001041,3.52e-11,80;UBERON:0004921,4.43e-10,114;UBERON:0001007,7.18e-10,116;UBERON:0001555,7.18e-10,116;UBERON:0007026,7.18e-10,116;UBERON:0001048,2.24e-09,134;UBERON:0004119,4.02e-09,118;UBERON:0000925,4.02e-09,118;UBERON:0006595,4.02e-09,118;UBERON:0000077,1.37e-07,35;UBERON:0004177,1.87e-07,29;UBERON:0005057,1.87e-07,29;UBERON:0000926,8.30e-07,120;UBERON:0004120,8.30e-07,120;UBERON:0006603,8.30e-07,120
|phase1_expression=1.44133962394315,0,0.454999239389536,6.95667686005709,3.50627010962443,0.16787927191189,0.467225281191051,6.71441281896197,1.267098499365,1.17032263160997,0.171217968225505,0.159544317990673,1.88320802924326,1.74840804837995,8.99396356902289,9.92128810210147,15.3903613188192,1.41957974411207,0.685572168028694,0.42438965179803,1.87095238332354,0.0992909512008853,0,1.43993180514066,1.14704640533585,0.57423196411502,0,0.430942465371778,0,0,0.443461021310609,8.89042942843484,4.92051830067656,0,1.1554064790051,0.498703936075477,0.408338712524738,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0,1.00717454380462,0.709638518536602,1.83546752161682,0.782391344348039,1.96222640742402,0.439372365468944,0.972149495371417,2.37976916763116,4.31257693094915,1.34226084846189,2.17608642603403,1.34437519656986,1.80081605225163,4.29800159908135,5.67239301505187,0.404632921719196,0.528990979272033,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,1.19840044207362,1.15265491596466,0.207379224616955,0.540023753326763,0,1.71390590642282,0.883474163806454,0.367472397644862,0.191690942036473,0,3.30347642998166,2.042997409363,1.0752457327937,0.263772575460388,1.18933936683133,0.52091337055676,2.23346399201105,0.56276261003168,1.37518422999129,0.883885756421003,0.427115042397309,0.559198337475902,0.075726193333184,0.453429360640713,10.1452571045587,0.860423876981386,0,0,2.59910566979068,0.448026887097336,1.96622188184453,0.511290967734173,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,2.38140145112336,1.77351905832569,2.02209778005913,1.94112595522402,3.36619248741323,1.63286352971307,3.99016251562112,2.43572382649713,0.461230994512117,1.50722640552623,1.64624189989987,1.13099932196708,5.93267922562497,1.01219549843938,6.19227386364912,0.970601099684455,5.30019644304944,6.78825354389311,0,0.878342391034642,0.83778682725382,0.766371165625774,0.718890747035522,0.599902730993408,0.762421362438388,1.3481157546434,0,0.251308704225729,1.04294592115366,0.767146371990992,0.83115217823824,0.324482526135515,2.44414473240759,5.10068579501381,2.77995034277042,0.841767423545896,0.780722657776222,1.37941262660084,0.900310649026746,0.90422890701429,0.816437989815934,1.15302348256365,0.937017245597288,1.55222022443409,0.215567992932842,1.32374256117473,2.46331573829528,1.31517439456545,1.39023624612799,2.78601733217733,2.67516777330327,3.78165106955137,0.702213187313235,1.28673953557358,0,1.44988040774851,1.87620847984877,1.44049649168812,2.3674473558521,1.18058539048442,1.54267112887378,3.48800917125612,1.60964040839772,1.86824547787471,2.13927804887525,2.29834449710733,1.78351381000883,2.48539978623065,2.85415149878366,4.56301823785264,0.420579897128254,1.02904612379284,1.98251269790279,4.23120906661671,0.853153002140936,1.85789337488351,1.80414445850931,5.44545516483025,2.66853652613844,3.61428689613862,0.949058123089023,2.30578536613615,2.26201687920243,1.79060824837036,2.14460495831032,3.59527763461689,2.16138049874694,3.18626037206988,0.948339504765408,1.25673363870702,0,0.814605311381257,0.775809948670503,1.33258057791605,2.08680572510049,2.36176236767363,2.35498091762062,2.96153193412321,0.592905254174298,6.67380422864376,9.04171377520734,11.2431056192427,8.72298521970563,8.92355491083942,10.4396599230382,5.75392274901621,3.24270453550071,5.49122826376163,1.43768206527355,1.86070473834252,0.624075346229121,1.26289438973556,0.896987067609561,5.78932225636041,1.66277871149944,1.51593129416388,1.14075483509418,1.69745085775188,2.11221223459652,6.86775655511445,4.28478553594825,5.65887578787617,2.36452716159286,1.55025282754142,1.43509291791738,0.81931657357869,2.07221978239075,2.74833211304872,0,0.54390568381871,0.983528546038072,0,2.40825884981688,1.75817529888305,0.819674726883377,3.28212205365685,0.631016438832513,0.780877488593277,0.215423397732799,0.477937595905104,0,0,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,10.5035663054119,4.45164009168138,2.44330439030364,2.8044920905331,3.98235415019888,1.94224508923985,1.209294227859,0.377210159511796,0.295301892880773,0.614870295887855,2.84271122485043,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,1.26042765821917,0.646793418913773,0.857348140126369,0.532020700926821,1.42695054081656,1.81003922662333,1.2178597964584,0,0.21183207086382,2.20528398054962,2.14352128823924,2.26050197374268,2.47282992205439,2.14870219205646,1.80554989719567,3.49777003955821,2.41052892613663,7.17657699350981,3.50857675537478,4.44466865687308,11.6788443342908,9.02181902958766,9.37990510146743,1.5298058699447,1.6794174278839,2.21119958087078,2.86401185404534,2.37251995185852,2.23651413839534,3.24016022465404,4.18176592028937,3.9305261474312,3.9110660451598,2.23164330458407,1.57053565190418,1.42576470620972,2.4853572523477,0.56369293868419,3.28936401296753,2.31641886639937,2.72231663681667,1.54991788173277,1.35164900392623,1.76035857968631,1.43224823328345,2.30690557736564,1.44950472495604,1.15212002503146,18.3286449964343,4.45995473638361,4.62199307241723,11.433032422046,19.692936523423,17.8813219303138,17.3081447308755,12.8489888641882,16.1546319917036,20.652044603505,15.9305372516208,14.5212242302231,17.4143433368996,34.9461937522891,1.36038230169127,1.10992976687032,0.358855426437903,0.335769232728157,3.86379188064381,0.375364950902364,0.915758121336325,8.57473516316263,1.00314420807073,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0.726511433089237,1.19707462020309,1.70733605754134,2.18796045361465,2.30574478890781,2.5738091183002,2.66696073361938,1.64828045791115,2.56735367673452,1.76888048234658,2.28131369901216,3.01802146217722,1.96647165686753,1.92075457214608,1.55075766180156,0.952587382566147,1.97003354106254,3.08654752741928,2.47251540481984,1.03039244094078,2.74295401908332,1.95223386775271,1.43061713968393,2.0348498328526,2.1645157495526,1.69229215783353,2.74391959309159,1.31534855718921,1.90125759384206,1.12228454331548,2.60997039873183,1.57607171800902,0.818462086339379,2.63392630016142,2.70069255373598,1.49886346762768,2.10538447600868,3.00819475667618,1.3390183244819,1.10295709559758,1.39120701372253
|phase1_expression=1.44133962394315,0,0.454999239389536,6.95667686005709,3.50627010962443,0.16787927191189,0.467225281191051,6.71441281896197,1.267098499365,1.17032263160997,0.171217968225505,0.159544317990673,1.88320802924326,1.74840804837995,8.99396356902289,9.92128810210147,15.3903613188192,1.41957974411207,0.685572168028694,0.42438965179803,1.87095238332354,0.0992909512008853,0,1.43993180514066,1.14704640533585,0.57423196411502,0,0.430942465371778,0,0,0.443461021310609,8.89042942843484,4.92051830067656,0,1.1554064790051,0.498703936075477,0.408338712524738,1.25559489221072,0,0.523523743973798,0.588231488031014,0,0,1.00717454380462,0.709638518536602,1.83546752161682,0.782391344348039,1.96222640742402,0.439372365468944,0.972149495371417,2.37976916763116,4.31257693094915,1.34226084846189,2.17608642603403,1.34437519656986,1.80081605225163,4.29800159908135,5.67239301505187,0.404632921719196,0.528990979272033,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,1.19840044207362,1.15265491596466,0.207379224616955,0.540023753326763,0,1.71390590642282,0.883474163806454,0.367472397644862,0.191690942036473,0,3.30347642998166,2.042997409363,1.0752457327937,0.263772575460388,1.18933936683133,0.52091337055676,2.23346399201105,0.56276261003168,1.37518422999129,0.883885756421003,0.427115042397309,0.559198337475902,0.075726193333184,0.453429360640713,10.1452571045587,0.860423876981386,0,0,2.59910566979068,0.448026887097336,1.96622188184453,0.511290967734173,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,2.38140145112336,1.77351905832569,2.02209778005913,1.94112595522402,3.36619248741323,1.63286352971307,3.99016251562112,2.43572382649713,0.461230994512117,1.50722640552623,1.64624189989987,1.13099932196708,5.93267922562497,1.01219549843938,6.19227386364912,0.970601099684455,5.30019644304944,6.78825354389311,0,0.878342391034642,0.83778682725382,0.766371165625774,0.718890747035522,0.599902730993408,0.762421362438388,1.3481157546434,0,0.251308704225729,1.04294592115366,0.767146371990992,0.83115217823824,0.324482526135515,2.44414473240759,5.10068579501381,2.77995034277042,0.841767423545896,0.780722657776222,1.37941262660084,0.900310649026746,0.90422890701429,0.816437989815934,1.15302348256365,0.937017245597288,1.55222022443409,0.215567992932842,1.32374256117473,2.46331573829528,1.31517439456545,1.39023624612799,2.78601733217733,2.67516777330327,3.78165106955137,0.702213187313235,1.28673953557358,0,1.44988040774851,1.87620847984877,1.44049649168812,2.3674473558521,1.18058539048442,1.54267112887378,3.48800917125612,1.60964040839772,1.86824547787471,2.13927804887525,2.29834449710733,1.78351381000883,2.48539978623065,2.85415149878366,4.56301823785264,0.420579897128254,1.02904612379284,1.98251269790279,4.23120906661671,0.853153002140936,1.85789337488351,1.80414445850931,5.44545516483025,2.66853652613844,3.61428689613862,0.949058123089023,2.30578536613615,2.26201687920243,1.79060824837036,2.14460495831032,3.59527763461689,2.16138049874694,3.18626037206988,0.948339504765408,1.25673363870702,0,0.814605311381257,0.775809948670503,1.33258057791605,2.08680572510049,2.36176236767363,2.35498091762062,2.96153193412321,0.592905254174298,6.67380422864376,9.04171377520734,11.2431056192427,8.72298521970563,8.92355491083942,10.4396599230382,5.75392274901621,3.24270453550071,5.49122826376163,1.43768206527355,1.86070473834252,0.624075346229121,1.26289438973556,0.896987067609561,5.78932225636041,1.66277871149944,1.51593129416388,1.14075483509418,1.69745085775188,2.11221223459652,6.86775655511445,4.28478553594825,5.65887578787617,2.36452716159286,1.55025282754142,1.43509291791738,0.81931657357869,2.07221978239075,2.74833211304872,0,0.54390568381871,0.983528546038072,0,2.40825884981688,1.75817529888305,0.819674726883377,3.28212205365685,0.631016438832513,0.780877488593277,0.215423397732799,0.477937595905104,0,0,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,10.5035663054119,4.45164009168138,2.44330439030364,2.8044920905331,3.98235415019888,1.94224508923985,1.209294227859,0.377210159511796,0.295301892880773,0.614870295887855,2.84271122485043,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,1.26042765821917,0.646793418913773,0.857348140126369,0.532020700926821,1.42695054081656,1.81003922662333,1.2178597964584,0,0.21183207086382,2.20528398054962,2.14352128823924,2.26050197374268,2.47282992205439,2.14870219205646,1.80554989719567,3.49777003955821,2.41052892613663,7.17657699350981,3.50857675537478,4.44466865687308,11.6788443342908,9.02181902958766,9.37990510146743,1.5298058699447,1.6794174278839,2.21119958087078,2.86401185404534,2.37251995185852,2.23651413839534,3.24016022465404,4.18176592028937,3.9305261474312,3.9110660451598,2.23164330458407,1.57053565190418,1.42576470620972,2.4853572523477,0.56369293868419,3.28936401296753,2.31641886639937,2.72231663681667,1.54991788173277,1.35164900392623,1.76035857968631,1.43224823328345,2.30690557736564,1.44950472495604,1.15212002503146,18.3286449964343,4.45995473638361,4.62199307241723,11.433032422046,19.692936523423,17.8813219303138,17.3081447308755,12.8489888641882,16.1546319917036,20.652044603505,15.9305372516208,14.5212242302231,17.4143433368996,34.9461937522891,1.36038230169127,1.10992976687032,0.358855426437903,0.335769232728157,3.86379188064381,0.375364950902364,0.915758121336325,8.57473516316263,1.00314420807073,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0.726511433089237,1.19707462020309,1.70733605754134,2.18796045361465,2.30574478890781,2.5738091183002,2.66696073361938,1.64828045791115,2.56735367673452,1.76888048234658,2.28131369901216,3.01802146217722,1.96647165686753,1.92075457214608,1.55075766180156,0.952587382566147,1.97003354106254,3.08654752741928,2.47251540481984,1.03039244094078,2.74295401908332,1.95223386775271,1.43061713968393,2.0348498328526,2.1645157495526,1.69229215783353,2.74391959309159,1.31534855718921,1.90125759384206,1.12228454331548,2.60997039873183,1.57607171800902,0.818462086339379,2.63392630016142,2.70069255373598,1.49886346762768,2.10538447600868,3.00819475667618,1.3390183244819,1.10295709559758,1.39120701372253
|short_description=p1@Neu3
|short_description=p1@Neu3
}}
}}

Latest revision as of 14:25, 25 September 2015

Short description:p1@Neu3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Neu3_5end
Coexpression cluster:MCL_coexpression_mm9:527
Association with transcript: 32bp_to_ENSMUST00000036331, NM_016720, uc009imc.1_5end
EntrezGene:Neu3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Neu3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F86.67
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H19.02
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C511.43
thymus, embryo E17.CNhs10581.478-18C119.69
thymus, embryo E18.CNhs10595.1273-19G417.88
thymus, neonate N02.CNhs11181.1541-43F817.31
thymus, neonate N03.CNhs11137.2104-43C712.85
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D320.65
thymus, neonate N10.CNhs11194.748-24E415.93
thymus, neonate N20.CNhs11186.820-7A214.52
thymus, neonate N25.CNhs11125.1362-25G717.41
thymus, neonate N30.CNhs11132.1393-42G234.95
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut3.52e-1180
subdivision of digestive tract4.43e-10114
digestive system7.18e-10116
digestive tract7.18e-10116
primitive gut7.18e-10116
primordium2.24e-09134
endoderm-derived structure4.02e-09118
endoderm4.02e-09118
presumptive endoderm4.02e-09118
mixed endoderm/mesoderm-derived structure1.37e-0735
hemopoietic organ1.87e-0729
immune organ1.87e-0729
mesoderm8.30e-07120
mesoderm-derived structure8.30e-07120
presumptive mesoderm8.30e-07120
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:106976854..106976894,-&oldid=4196331"