FFCP PHASE1:Mm9::chr4:98590442..98590468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230484 | |EntrezGene=230484 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BJQ2 | |UniProt=Q8BJQ2 | ||
|association_with_transcript=-32bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end | |association_with_transcript=-32bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end | ||
|cluster_id=chr4:98590442..98590468,+ | |||
|description=CAGE_peak_4_at_Usp1_5end | |description=CAGE_peak_4_at_Usp1_5end | ||
|id=chr4:98590442..98590468,+ | |id=chr4:98590442..98590468,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.98e-14!130;UBERON:0000925!5.98e-14!130;UBERON:0006595!5.98e-14!130;UBERON:0001007!5.33e-13!128;UBERON:0001555!5.33e-13!128;UBERON:0007026!5.33e-13!128;UBERON:0002405!1.62e-12!70;UBERON:0004921!2.33e-12!126;UBERON:0004185!2.33e-12!126;UBERON:0003929!5.48e-12!55;UBERON:0005057!8.51e-11!51;UBERON:0000490!7.13e-10!66;UBERON:0004923!1.34e-09!24;UBERON:0005911!1.46e-08!69;UBERON:0002193!1.14e-07!48;UBERON:0000077!2.73e-07!97;UBERON:0002390!5.45e-07!45;UBERON:0003061!5.45e-07!45;UBERON:0001041!6.19e-07!92;UBERON:0005409!7.43e-07!59 | |ontology_enrichment_uberon=UBERON:0004119!5.98e-14!130;UBERON:0000925!5.98e-14!130;UBERON:0006595!5.98e-14!130;UBERON:0001007!5.33e-13!128;UBERON:0001555!5.33e-13!128;UBERON:0007026!5.33e-13!128;UBERON:0002405!1.62e-12!70;UBERON:0004921!2.33e-12!126;UBERON:0004185!2.33e-12!126;UBERON:0003929!5.48e-12!55;UBERON:0005057!8.51e-11!51;UBERON:0000490!7.13e-10!66;UBERON:0004923!1.34e-09!24;UBERON:0005911!1.46e-08!69;UBERON:0002193!1.14e-07!48;UBERON:0000077!2.73e-07!97;UBERON:0002390!5.45e-07!45;UBERON:0003061!5.45e-07!45;UBERON:0001041!6.19e-07!92;UBERON:0005409!7.43e-07!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.60e-13,118;UBERON:0000925,1.60e-13,118;UBERON:0006595,1.60e-13,118;UBERON:0003929,5.12e-13,55;UBERON:0001007,1.48e-12,116;UBERON:0001555,1.48e-12,116;UBERON:0007026,1.48e-12,116;UBERON:0004921,6.59e-12,114;UBERON:0000490,1.15e-10,66;UBERON:0004923,5.20e-10,24;UBERON:0005911,1.40e-08,69;UBERON:0002193,1.63e-08,48;UBERON:0002405,1.63e-08,48;UBERON:0002390,8.73e-08,45;UBERON:0003061,8.73e-08,45;UBERON:0004177,4.42e-07,29;UBERON:0005057,4.42e-07,29;UBERON:0005409,4.62e-07,47;UBERON:0000344,6.83e-07,15 | |||
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| ||
|short_description=p4@Usp1 | |short_description=p4@Usp1 | ||
}} | }} |
Latest revision as of 08:00, 27 September 2015
Short description: | p4@Usp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Usp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -32bp_to_ENSMUST00000030289, NM_146144, uc008tum.1, uc008tun.1_5end |
EntrezGene: | Usp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.60e-13 | 118 |
endoderm | 1.60e-13 | 118 |
presumptive endoderm | 1.60e-13 | 118 |
gut epithelium | 5.12e-13 | 55 |
digestive system | 1.48e-12 | 116 |
digestive tract | 1.48e-12 | 116 |
primitive gut | 1.48e-12 | 116 |
subdivision of digestive tract | 6.59e-12 | 114 |
unilaminar epithelium | 1.15e-10 | 66 |
organ component layer | 5.20e-10 | 24 |
endo-epithelium | 1.40e-08 | 69 |
hemolymphoid system | 1.63e-08 | 48 |
immune system | 1.63e-08 | 48 |
hematopoietic system | 8.73e-08 | 45 |
blood island | 8.73e-08 | 45 |
hemopoietic organ | 4.42e-07 | 29 |
immune organ | 4.42e-07 | 29 |
gastrointestinal system | 4.62e-07 | 47 |
mucosa | 6.83e-07 | 15 |