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FFCP PHASE1:Mm9::chr10:91627904..91627922,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110333
|EntrezGene=110333
|HGNC=
|HGNC=
|MCL_coexpression_id=224
|MCL_coexpression_id=224
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000133537,ENSMUST00000137229,NR_028262,uc007gtz.2,uc007guc.2_5end
|association_with_transcript=0bp_to_ENSMUST00000133537,ENSMUST00000137229,NR_028262,uc007gtz.2,uc007guc.2_5end
|cluster_id=chr10:91627904..91627922,-
|description=CAGE_peak_1_at_Rmst_5end
|description=CAGE_peak_1_at_Rmst_5end
|id=chr10:91627904..91627922,-
|id=chr10:91627904..91627922,-
|ontology_enrichment_celltype=CL:0000117!2.27e-14!23;CL:0000337!2.27e-14!23;CL:0000540!1.39e-07!33;CL:0000047!1.39e-07!33;CL:0000031!1.39e-07!33;CL:0000404!1.39e-07!33
|ontology_enrichment_celltype=CL:0000117!2.27e-14!23;CL:0000337!2.27e-14!23;CL:0000540!1.39e-07!33;CL:0000047!1.39e-07!33;CL:0000031!1.39e-07!33;CL:0000404!1.39e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-14,23;CL:0000337,1.14e-14,23;CL:0000540,4.97e-08,33;CL:0000047,4.97e-08,33;CL:0000031,4.97e-08,33;CL:0000404,4.97e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.39e-19!63;UBERON:0003056!1.36e-18!49;UBERON:0002346!7.34e-18!71;UBERON:0003075!7.34e-18!71;UBERON:0007284!7.34e-18!71;UBERON:0001049!9.74e-17!52;UBERON:0005068!9.74e-17!52;UBERON:0006241!9.74e-17!52;UBERON:0007135!9.74e-17!52;UBERON:0000955!3.48e-15!50;UBERON:0006238!3.48e-15!50;UBERON:0002616!3.81e-15!49;UBERON:0001017!3.27e-14!73;UBERON:0005743!3.27e-14!73;UBERON:0000073!8.96e-14!75;UBERON:0001016!8.96e-14!75;UBERON:0004121!2.86e-13!102;UBERON:0000924!2.86e-13!102;UBERON:0006601!2.86e-13!102;UBERON:0003080!3.15e-13!40;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0000153!2.35e-11!94;UBERON:0007811!3.03e-11!86;UBERON:0002020!5.51e-10!34;UBERON:0001894!1.72e-07!10;UBERON:0006222!1.72e-07!10;UBERON:0002791!4.04e-07!29;UBERON:0003528!4.04e-07!29;UBERON:0001893!4.04e-07!29
|ontology_enrichment_uberon=UBERON:0000033!1.39e-19!63;UBERON:0003056!1.36e-18!49;UBERON:0002346!7.34e-18!71;UBERON:0003075!7.34e-18!71;UBERON:0007284!7.34e-18!71;UBERON:0001049!9.74e-17!52;UBERON:0005068!9.74e-17!52;UBERON:0006241!9.74e-17!52;UBERON:0007135!9.74e-17!52;UBERON:0000955!3.48e-15!50;UBERON:0006238!3.48e-15!50;UBERON:0002616!3.81e-15!49;UBERON:0001017!3.27e-14!73;UBERON:0005743!3.27e-14!73;UBERON:0000073!8.96e-14!75;UBERON:0001016!8.96e-14!75;UBERON:0004121!2.86e-13!102;UBERON:0000924!2.86e-13!102;UBERON:0006601!2.86e-13!102;UBERON:0003080!3.15e-13!40;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0000153!2.35e-11!94;UBERON:0007811!3.03e-11!86;UBERON:0002020!5.51e-10!34;UBERON:0001894!1.72e-07!10;UBERON:0006222!1.72e-07!10;UBERON:0002791!4.04e-07!29;UBERON:0003528!4.04e-07!29;UBERON:0001893!4.04e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.71e-18,64;UBERON:0003075,1.71e-18,64;UBERON:0007284,1.71e-18,64;UBERON:0003056,4.52e-16,49;UBERON:0000073,8.07e-16,54;UBERON:0010371,3.98e-15,73;UBERON:0001049,5.89e-14,52;UBERON:0005068,5.89e-14,52;UBERON:0006241,5.89e-14,52;UBERON:0007135,5.89e-14,52;UBERON:0004121,1.34e-13,95;UBERON:0000924,1.34e-13,95;UBERON:0006601,1.34e-13,95;UBERON:0001017,4.49e-12,73;UBERON:0001016,2.18e-11,75;UBERON:0003080,3.47e-10,40;UBERON:0002616,3.66e-10,46;UBERON:0000955,9.55e-10,47;UBERON:0006238,9.55e-10,47;UBERON:0002780,1.51e-09,39;UBERON:0001890,1.51e-09,39;UBERON:0006240,1.51e-09,39;UBERON:0010314,5.17e-09,92;UBERON:0001894,5.69e-09,10;UBERON:0006222,5.69e-09,10;UBERON:0000970,6.40e-08,9;UBERON:0000019,6.40e-08,9;UBERON:0000047,6.40e-08,9;UBERON:0010312,6.40e-08,9;UBERON:0004088,6.40e-08,9;UBERON:0002104,6.40e-08,9;UBERON:0001456,6.40e-08,9;UBERON:0003072,6.40e-08,9;UBERON:0004128,6.40e-08,9;UBERON:0003071,6.40e-08,9;UBERON:0000007,1.06e-07,8;UBERON:0003296,1.06e-07,8;UBERON:0010133,1.06e-07,8;UBERON:0002020,8.22e-07,34
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81027166476863,13.4156630361256,0.279972843250725,0,0,0,0,0,0,0,24.0756588422921,32.797440714866,20.9164363157039,0,0,0,0,0,0,0,1.03689612308478,0.270011876663381,0.210324961351382,3.14216082844184,3.09215957332259,2.44981598429908,2.20444583341944,0.919218786610021,12.1127469099328,7.40586560894089,6.60508093001847,27.4323478478803,24.793151416253,32.2966289745191,4.4669279840221,15.757353080887,10.3902808488231,13.5529149317887,14.9490264839058,18.4535451367048,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.68510327831436,0,0,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,6.44099749440738,0.915001205637253,1.88481528169297,1.56441888173049,0.767146371990992,3.1168206683934,3.40706652442291,6.00852246716866,9.70374370758726,22.2396027421634,1.47309299120532,16.0048144844126,6.43725892413724,7.56260945182467,9.0422890701429,7.0757959117381,7.04625461566674,4.49768277886698,2.32833033665114,0.431135985865684,1.70195472151037,2.63926686245923,0,1.11218899690239,0,0.411564272815887,6.17006227137329,0,0,0,0,0.469052119962192,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0.841159794256509,1.74937841044784,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.948339504765408,1.71372768914593,5.63538678365402,2.03651327845314,2.52138233317913,0.561086559122548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.39913891117389,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,4.25820255624806,2.31485284767432,2.11753047159649,15.3422214364458,0,0,0,0,0,0,0,0,0,0,0,0,5.44703369206061,8.28281032544027,4.2688365648309,6.85878512101095,11.3497749531055,9.45354733290974,7.89835298890181,2.43571959291679,0,0,0.220528398054962,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,1.64468200648377,0.496375471371293,1.16670713006429,1.6790777052105,0.675824501963113,1.29092962510329,1.5624526181274,0.524296722128554,0.241584120826006,0,0,0.810900861160657,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,6.22715522508701,0,4.51414893631827,0.564751842617067,0,1.14579102687879,0.515559547031063,0,0.755393897389701,0.675022500231806,1.35096360967266,0,0,2.90604573235695,10.7736715818278,6.82934423016537,2.43106717068294,1.25767897576789,0.735374033800057,2.889207461421,1.64828045791115,2.56735367673452,2.27427490587418,2.78827229879264,3.01802146217722,1.49826411951812,2.88113185821912,2.69946704091382,1.90517476513229,1.15884325944855,1.73618298417335,2.88460130562315,3.23837624295674,2.05721551431249,1.95223386775271,2.38436189947321,3.0522747492789,2.91739079287525,1.4384483341585,1.64635175585495,1.57841826862706,1.35804113845862,1.68342681497322,1.18635018124174,2.06859412988683,1.63692417267876,1.23949472948773,1.73615949883027,3.99696924700713,1.63752125911786,1.71896843238639,0.382576664137687,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81027166476863,13.4156630361256,0.279972843250725,0,0,0,0,0,0,0,24.0756588422921,32.797440714866,20.9164363157039,0,0,0,0,0,0,0,1.03689612308478,0.270011876663381,0.210324961351382,3.14216082844184,3.09215957332259,2.44981598429908,2.20444583341944,0.919218786610021,12.1127469099328,7.40586560894089,6.60508093001847,27.4323478478803,24.793151416253,32.2966289745191,4.4669279840221,15.757353080887,10.3902808488231,13.5529149317887,14.9490264839058,18.4535451367048,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.68510327831436,0,0,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,6.44099749440738,0.915001205637253,1.88481528169297,1.56441888173049,0.767146371990992,3.1168206683934,3.40706652442291,6.00852246716866,9.70374370758726,22.2396027421634,1.47309299120532,16.0048144844126,6.43725892413724,7.56260945182467,9.0422890701429,7.0757959117381,7.04625461566674,4.49768277886698,2.32833033665114,0.431135985865684,1.70195472151037,2.63926686245923,0,1.11218899690239,0,0.411564272815887,6.17006227137329,0,0,0,0,0.469052119962192,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0.841159794256509,1.74937841044784,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.948339504765408,1.71372768914593,5.63538678365402,2.03651327845314,2.52138233317913,0.561086559122548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.39913891117389,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,4.25820255624806,2.31485284767432,2.11753047159649,15.3422214364458,0,0,0,0,0,0,0,0,0,0,0,0,5.44703369206061,8.28281032544027,4.2688365648309,6.85878512101095,11.3497749531055,9.45354733290974,7.89835298890181,2.43571959291679,0,0,0.220528398054962,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,1.64468200648377,0.496375471371293,1.16670713006429,1.6790777052105,0.675824501963113,1.29092962510329,1.5624526181274,0.524296722128554,0.241584120826006,0,0,0.810900861160657,0.718976700153791,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,6.22715522508701,0,4.51414893631827,0.564751842617067,0,1.14579102687879,0.515559547031063,0,0.755393897389701,0.675022500231806,1.35096360967266,0,0,2.90604573235695,10.7736715818278,6.82934423016537,2.43106717068294,1.25767897576789,0.735374033800057,2.889207461421,1.64828045791115,2.56735367673452,2.27427490587418,2.78827229879264,3.01802146217722,1.49826411951812,2.88113185821912,2.69946704091382,1.90517476513229,1.15884325944855,1.73618298417335,2.88460130562315,3.23837624295674,2.05721551431249,1.95223386775271,2.38436189947321,3.0522747492789,2.91739079287525,1.4384483341585,1.64635175585495,1.57841826862706,1.35804113845862,1.68342681497322,1.18635018124174,2.06859412988683,1.63692417267876,1.23949472948773,1.73615949883027,3.99696924700713,1.63752125911786,1.71896843238639,0.382576664137687,0,0
|short_description=p1@Rmst
|short_description=p1@Rmst
}}
}}

Latest revision as of 14:15, 26 September 2015

Short description:p1@Rmst
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rmst_5end
Coexpression cluster:MCL_coexpression_mm9:224
Association with transcript: 0bp_to_ENSMUST00000133537, ENSMUST00000137229, NR_028262, uc007gtz.2, uc007guc.2_5end
EntrezGene:Rmst
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rmst

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C324.08
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B222.24
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C616.00
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C67.08
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.14e-1423
neuroblast (sensu Vertebrata)1.14e-1423
neuron4.97e-0833
neuronal stem cell4.97e-0833
neuroblast4.97e-0833
electrically signaling cell4.97e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm1.71e-1864
neural plate1.71e-1864
presumptive neural plate1.71e-1864
pre-chordal neural plate4.52e-1649
regional part of nervous system8.07e-1654
ecto-epithelium3.98e-1573
neural tube5.89e-1452
neural rod5.89e-1452
future spinal cord5.89e-1452
neural keel5.89e-1452
ectoderm-derived structure1.34e-1395
ectoderm1.34e-1395
presumptive ectoderm1.34e-1395
central nervous system4.49e-1273
nervous system2.18e-1175
anterior neural tube3.47e-1040
regional part of brain3.66e-1046
brain9.55e-1047
future brain9.55e-1047
regional part of forebrain1.51e-0939
forebrain1.51e-0939
future forebrain1.51e-0939
structure with developmental contribution from neural crest5.17e-0992
diencephalon5.69e-0910
future diencephalon5.69e-0910
eye6.40e-089
camera-type eye6.40e-089
simple eye6.40e-089
immature eye6.40e-089
ocular region6.40e-089
visual system6.40e-089
face6.40e-089
optic cup6.40e-089
optic vesicle6.40e-089
eye primordium6.40e-089
pituitary gland1.06e-078
gland of diencephalon1.06e-078
neuroendocrine gland1.06e-078
gray matter8.22e-0734
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