FFCP PHASE1:Mm9::chr3:51464300..51464317,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211666 | |EntrezGene=211666 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=50 | |MCL_coexpression_id=50 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENSMUST00000160753_5end | |association_with_transcript=18bp_to_ENSMUST00000160753_5end | ||
|cluster_id=chr3:51464300..51464317,+ | |||
|description=CAGE_peak_3_at_Mgst2_5end | |description=CAGE_peak_3_at_Mgst2_5end | ||
|id=chr3:51464300..51464317,+ | |id=chr3:51464300..51464317,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.85e-08,25;CL:0000553,3.74e-08,6;CL:0000556,3.74e-08,6;CL:0000988,1.23e-07,32;CL:0002032,1.23e-07,32;CL:0000037,1.23e-07,32;CL:0000837,1.23e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.38e-11!130;UBERON:0000925!5.38e-11!130;UBERON:0006595!5.38e-11!130;UBERON:0001007!2.39e-10!128;UBERON:0001555!2.39e-10!128;UBERON:0007026!2.39e-10!128;UBERON:0002193!9.65e-10!48;UBERON:0004921!2.19e-09!126;UBERON:0004185!2.19e-09!126;UBERON:0004177!6.59e-09!29;UBERON:0002405!2.62e-08!70;UBERON:0002390!5.75e-08!45;UBERON:0003061!5.75e-08!45;UBERON:0004923!2.22e-07!24;UBERON:0005057!9.28e-07!51 | |ontology_enrichment_uberon=UBERON:0004119!5.38e-11!130;UBERON:0000925!5.38e-11!130;UBERON:0006595!5.38e-11!130;UBERON:0001007!2.39e-10!128;UBERON:0001555!2.39e-10!128;UBERON:0007026!2.39e-10!128;UBERON:0002193!9.65e-10!48;UBERON:0004921!2.19e-09!126;UBERON:0004185!2.19e-09!126;UBERON:0004177!6.59e-09!29;UBERON:0002405!2.62e-08!70;UBERON:0002390!5.75e-08!45;UBERON:0003061!5.75e-08!45;UBERON:0004923!2.22e-07!24;UBERON:0005057!9.28e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.08e-19,48;UBERON:0002405,1.08e-19,48;UBERON:0002390,6.18e-15,45;UBERON:0003061,6.18e-15,45;UBERON:0004177,6.06e-12,29;UBERON:0005057,6.06e-12,29;UBERON:0000077,1.76e-09,35;UBERON:0003081,7.63e-09,87;UBERON:0002465,7.91e-09,3;UBERON:0002106,4.43e-08,6;UBERON:0004457,4.43e-08,6;UBERON:0000042,4.43e-08,6;UBERON:0004854,4.43e-08,6;UBERON:0009034,4.43e-08,6;UBERON:0002095,4.43e-08,6;UBERON:0004782,4.43e-08,6;UBERON:0003281,4.43e-08,6;UBERON:0009664,4.43e-08,6;UBERON:0002296,4.43e-08,6;UBERON:0005602,4.43e-08,6;UBERON:0001179,4.43e-08,6;UBERON:0006293,4.43e-08,6;UBERON:0001474,5.96e-07,22;UBERON:0004765,5.96e-07,22;UBERON:0001434,5.96e-07,22 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0.233612640595526,3.48632973292256,0,0,0,0,0.171200729931206,0.262261207256992,0.666219523631325,1.21485160433896,0,4.88966356305268,3.70208970735495,5.51706547337439,0.0850432901510698,297.376398846651,482.958410117892,1.43993180514066,1.14704640533585,0,0,0.430942465371778,0.380046838912748,0.504060259519861,1.55211357458713,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.02678254538567,0.725362142011344,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,4.14300613835475,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0.578397427679647,1.76922110389975,0.161766849947409,1.10420759230197,1.45462575940567,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,1.28673953557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.951128130562796,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0.863088412352432,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.632073515871632,2.10837217149998,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.32977250588296,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.619160603889667,1.85194527369712,3.39063222608444,2.87057878214153,5.0331198105435,0.169978429993855,0.559805809294632,0.414599921413271,0,0,0.406638934253697,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,3.04087822935246,3.08132871494482,2.85825810551149,2.14832034800978,3.57626438606277,0.961563596159751,0.738447635872886,1.81739609906666,0.914481679859998,0.907435666231565,0.682205165178267,1.6356013078856,1.63627663054197,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.423073039458382,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.661774257358546,0 | |phase1_expression=0,0.348975407639361,0,0,0,0.671517087647559,0.233612640595526,3.48632973292256,0,0,0,0,0.171200729931206,0.262261207256992,0.666219523631325,1.21485160433896,0,4.88966356305268,3.70208970735495,5.51706547337439,0.0850432901510698,297.376398846651,482.958410117892,1.43993180514066,1.14704640533585,0,0,0.430942465371778,0.380046838912748,0.504060259519861,1.55211357458713,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.02678254538567,0.725362142011344,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,4.14300613835475,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0.578397427679647,1.76922110389975,0.161766849947409,1.10420759230197,1.45462575940567,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.746441823660558,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,1.28673953557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0.528901133327089,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.951128130562796,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0.863088412352432,0.648540907100142,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.788175720530955,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.632073515871632,2.10837217149998,0,0,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.32977250588296,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.619160603889667,1.85194527369712,3.39063222608444,2.87057878214153,5.0331198105435,0.169978429993855,0.559805809294632,0.414599921413271,0,0,0.406638934253697,0.324016022465404,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,3.04087822935246,3.08132871494482,2.85825810551149,2.14832034800978,3.57626438606277,0.961563596159751,0.738447635872886,1.81739609906666,0.914481679859998,0.907435666231565,0.682205165178267,1.6356013078856,1.63627663054197,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.192075457214608,0.287177344778066,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.423073039458382,0,0,0.271608227691724,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.661774257358546,0 | ||
|short_description=p3@Mgst2 | |short_description=p3@Mgst2 | ||
}} | }} |
Latest revision as of 13:59, 25 September 2015
Short description: | p3@Mgst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mgst2_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 18bp_to_ENSMUST00000160753_5end |
EntrezGene: | Mgst2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.85e-08 | 25 |
megakaryocyte progenitor cell | 3.74e-08 | 6 |
megakaryocyte | 3.74e-08 | 6 |
hematopoietic cell | 1.23e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.23e-07 | 32 |
hematopoietic stem cell | 1.23e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.23e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.08e-19 | 48 |
immune system | 1.08e-19 | 48 |
hematopoietic system | 6.18e-15 | 45 |
blood island | 6.18e-15 | 45 |
hemopoietic organ | 6.06e-12 | 29 |
immune organ | 6.06e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 1.76e-09 | 35 |
lateral plate mesoderm | 7.63e-09 | 87 |
lymphoid system | 7.91e-09 | 3 |
spleen | 4.43e-08 | 6 |
cavity lining | 4.43e-08 | 6 |
serous membrane | 4.43e-08 | 6 |
gastrointestinal system mesentery | 4.43e-08 | 6 |
stomach region | 4.43e-08 | 6 |
mesentery | 4.43e-08 | 6 |
gastrointestinal system serosa | 4.43e-08 | 6 |
mesentery of stomach | 4.43e-08 | 6 |
gut mesentery | 4.43e-08 | 6 |
dorsal mesentery | 4.43e-08 | 6 |
dorsal mesogastrium | 4.43e-08 | 6 |
peritoneal cavity | 4.43e-08 | 6 |
spleen primordium | 4.43e-08 | 6 |
bone element | 5.96e-07 | 22 |
skeletal element | 5.96e-07 | 22 |
skeletal system | 5.96e-07 | 22 |