FFCP PHASE1:Mm9::chr11:101163543..101163605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56208 | |EntrezGene=56208 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=163 | |MCL_coexpression_id=163 | ||
|TSSclassifier=NA | |||
|UniProt=E9QAM0,O88597,E9PX06,E9PYD6 | |UniProt=E9QAM0,O88597,E9PX06,E9PYD6 | ||
|association_with_transcript=0bp_to_ENSMUST00000041403,ENSMUST00000122817,ENSMUST00000130916,ENSMUST00000137614,ENSMUST00000139669,ENSMUST00000139997,ENSMUST00000164036,ENSMUST00000167667,ENSMUST00000167818,ENSMUST00000170502,ENSMUST00000172233,NM_019584,uc007loj.1,uc007lok.1,uc007lol.1_5end | |association_with_transcript=0bp_to_ENSMUST00000041403,ENSMUST00000122817,ENSMUST00000130916,ENSMUST00000137614,ENSMUST00000139669,ENSMUST00000139997,ENSMUST00000164036,ENSMUST00000167667,ENSMUST00000167818,ENSMUST00000170502,ENSMUST00000172233,NM_019584,uc007loj.1,uc007lok.1,uc007lol.1_5end | ||
|cluster_id=chr11:101163543..101163605,- | |||
|description=CAGE_peak_1_at_Becn1_5end | |description=CAGE_peak_1_at_Becn1_5end | ||
|id=chr11:101163543..101163605,- | |id=chr11:101163543..101163605,- | ||
|ontology_enrichment_celltype=CL:0000066!1.07e-09!25;CL:0002076!7.44e-08!15;CL:0000223!9.55e-08!20 | |ontology_enrichment_celltype=CL:0000066!1.07e-09!25;CL:0002076!7.44e-08!15;CL:0000223!9.55e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-09,25;CL:0002076,7.44e-08,15;CL:0000223,9.55e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.36e-09!15;UBERON:0000064!1.70e-09!99;UBERON:0004923!6.97e-09!24;UBERON:0001242!1.89e-08!13;UBERON:0000060!1.89e-08!13;UBERON:0001262!1.89e-08!13;UBERON:0004786!1.89e-08!13;UBERON:0000490!2.98e-07!66 | |ontology_enrichment_uberon=UBERON:0000344!1.36e-09!15;UBERON:0000064!1.70e-09!99;UBERON:0004923!6.97e-09!24;UBERON:0001242!1.89e-08!13;UBERON:0000060!1.89e-08!13;UBERON:0001262!1.89e-08!13;UBERON:0004786!1.89e-08!13;UBERON:0000490!2.98e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.36e-09,15;UBERON:0004923,6.97e-09,24;UBERON:0001242,1.89e-08,13;UBERON:0001262,1.89e-08,13;UBERON:0004786,1.89e-08,13;UBERON:0001007,8.01e-08,116;UBERON:0001555,8.01e-08,116;UBERON:0007026,8.01e-08,116;UBERON:0004119,9.89e-08,118;UBERON:0000925,9.89e-08,118;UBERON:0006595,9.89e-08,118;UBERON:0000160,2.57e-07,31;UBERON:0000490,2.98e-07,66;UBERON:0004921,4.26e-07,114 | |||
|phase1_expression=57.1731384164114,247.423564016307,288.469517772966,232.897442706259,254.455030812744,141.354346949811,128.95417760873,68.0479914537107,92.3574017314934,107.903746634439,76.8768677332517,69.481550484938,67.7954890527575,70.4608443497119,83.6105502157313,111.158921797014,134.315880600604,65.4583993118343,63.7582116266685,70.024292546675,71.2662771465965,55.9008055260984,64.516347917317,109.594809613484,125.945695305876,219.356610291938,217.104046064174,160.526068350987,80.7599532689589,112.405437872929,104.435070518649,45.0871778156338,44.284664706089,31.6963362030877,75.6791243748339,73.1432439577366,82.0760812174724,156.530829895603,113.293624955951,110.987033722445,155.881344328219,158.466552510359,158.276375088156,68.3619721607385,62.853697356099,62.0388022306484,26.6013057078333,32.703773457067,39.5435128922049,51.1350634565365,48.9952475688769,18.6878333674463,72.3143032108844,70.3601277751004,69.57141642249,63.285821264843,67.6218918255466,69.6157324574547,33.7868489635528,49.7251520515711,32.9592329823213,35.2398313351897,44.464739805557,35.0960889739746,34.6103226898441,34.1030455174128,27.5632101676932,33.0427742576537,40.7500176372317,40.2317696228438,45.6405166132499,39.1341848633211,45.0571823541292,47.893902493047,41.1177070668234,43.203282970671,75.9799578895782,78.6554002604756,76.1888404950968,34.9498662485014,42.0843160571084,43.7567231267678,64.7704557683204,76.5357149643085,73.3431589328688,59.2203456802072,59.3689908932259,37.6526880567107,61.4896689865455,71.6418389812327,84.0607017234866,75.717301174362,52.3577926954968,69.0820085296406,59.1296539877379,59.1395490968483,60.8124339170486,38.6876832252191,38.9679006904303,42.4007489412408,73.2385782838739,79.562415996877,117.210410265057,71.1066703153331,73.6069539438128,63.0866065032995,68.2458000769957,79.0152447655895,55.9305828677891,53.5876122024017,42.5039050577033,59.0663027925554,43.5863289813951,45.2167921657868,44.0957651758893,56.549966098354,61.5515469658591,38.3188295837766,61.0381280845413,43.1917489359583,54.1061720227964,66.9127849326607,70.8288692628864,55.9211322292055,58.0167377873271,91.7090828198843,54.8753270237115,57.5906621753671,57.5628128640983,60.9647902377628,72.285095245343,49.2565060282428,67.0961875942187,91.5461337242583,55.0638318082834,73.8197746958297,40.1247093570246,67.9262059531108,78.5967778728728,77.8634866779954,41.7686621910279,44.3711061556603,45.0155324513373,47.9241320717574,50.7552283668906,52.014170435649,52.0044571306495,49.153640440413,26.9459991166053,29.8787606665154,31.1433489770189,33.0985555965638,34.4778589039741,32.0391993200393,36.423438144206,36.8213393614212,54.0704154231191,64.8516725929082,65.3576048609863,45.7747957303459,34.7098568772022,42.6747085662605,40.7200945206562,44.0751879114185,39.6466480120562,42.3211779445742,52.3133132729257,53.8288228312651,46.4058776756015,51.5485837208359,53.9107583479941,54.2401953347983,50.2769764016506,63.4796360736558,68.1339433347772,43.0141279745409,131.837094410535,71.401652999157,37.7520203447364,43.6604943097624,37.8870336286954,45.3787930402521,46.6993892074228,53.2631753115166,83.0425857702895,62.4209038404001,64.5931486616693,62.4723322209214,61.4136874425228,78.1972885529173,81.4840448027597,117.891633766585,32.433211062977,49.0126119095737,42.8289395557706,51.1164832891739,47.9062643304036,53.6539022160937,51.9804335161395,66.2769564428414,71.5914198956669,80.8251423687793,56.6224517736454,51.0546023491248,55.0365186316968,53.2923206352103,62.0751971448819,69.2178448489436,62.1287078346664,61.8546695519243,59.1793577728879,38.7131592595195,51.7565543498476,37.9583766621873,49.6139900252151,52.2838277350521,47.5403145833067,43.419916922703,64.8483697484782,42.6355676483591,36.3411897465718,42.436271443797,37.5504397261603,39.6989830137103,39.0391571053063,61.4670990752066,51.7043272668306,60.9027896534131,57.8820810226678,68.167138921747,70.9735275468831,81.8713671571356,66.3481649332798,66.3564934258826,45.7340773907704,45.8054998865856,66.4679442549459,71.3819171346517,32.7869890753351,71.4492723988376,63.4171521026676,60.1275666216823,66.3504065017021,59.0252930942804,69.9587836618717,60.0122245272325,59.9119838478844,68.387870751247,67.198922250909,60.7297288037215,47.4079884595617,42.3796136728067,37.7897745700296,57.0796625484973,83.6294371541766,34.4748503340074,40.8136801902414,35.8349651536206,31.5973025382427,42.426050416262,60.2137923081955,49.4405872089407,42.0666906493971,58.1507634601901,66.4137234022492,58.7872596514665,38.8101150559318,48.7965564824851,37.6433769807816,44.7964403216028,48.0592033170561,47.0893678469466,47.0610198922066,35.0134691481789,50.4544172336977,57.4064912040953,67.2611614067634,61.9972311059965,41.4963576608477,42.3999862244936,51.2107355773455,53.50993331689,79.2827875633194,65.8259822137309,73.3036078622788,44.5795634800561,48.3357716434947,97.1981238144206,76.4120732960531,94.9429418807069,61.7021700877695,56.1205323817869,64.5393877666659,84.01101438533,33.847951313181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| |phase1_expression=57.1731384164114,247.423564016307,288.469517772966,232.897442706259,254.455030812744,141.354346949811,128.95417760873,68.0479914537107,92.3574017314934,107.903746634439,76.8768677332517,69.481550484938,67.7954890527575,70.4608443497119,83.6105502157313,111.158921797014,134.315880600604,65.4583993118343,63.7582116266685,70.024292546675,71.2662771465965,55.9008055260984,64.516347917317,109.594809613484,125.945695305876,219.356610291938,217.104046064174,160.526068350987,80.7599532689589,112.405437872929,104.435070518649,45.0871778156338,44.284664706089,31.6963362030877,75.6791243748339,73.1432439577366,82.0760812174724,156.530829895603,113.293624955951,110.987033722445,155.881344328219,158.466552510359,158.276375088156,68.3619721607385,62.853697356099,62.0388022306484,26.6013057078333,32.703773457067,39.5435128922049,51.1350634565365,48.9952475688769,18.6878333674463,72.3143032108844,70.3601277751004,69.57141642249,63.285821264843,67.6218918255466,69.6157324574547,33.7868489635528,49.7251520515711,32.9592329823213,35.2398313351897,44.464739805557,35.0960889739746,34.6103226898441,34.1030455174128,27.5632101676932,33.0427742576537,40.7500176372317,40.2317696228438,45.6405166132499,39.1341848633211,45.0571823541292,47.893902493047,41.1177070668234,43.203282970671,75.9799578895782,78.6554002604756,76.1888404950968,34.9498662485014,42.0843160571084,43.7567231267678,64.7704557683204,76.5357149643085,73.3431589328688,59.2203456802072,59.3689908932259,37.6526880567107,61.4896689865455,71.6418389812327,84.0607017234866,75.717301174362,52.3577926954968,69.0820085296406,59.1296539877379,59.1395490968483,60.8124339170486,38.6876832252191,38.9679006904303,42.4007489412408,73.2385782838739,79.562415996877,117.210410265057,71.1066703153331,73.6069539438128,63.0866065032995,68.2458000769957,79.0152447655895,55.9305828677891,53.5876122024017,42.5039050577033,59.0663027925554,43.5863289813951,45.2167921657868,44.0957651758893,56.549966098354,61.5515469658591,38.3188295837766,61.0381280845413,43.1917489359583,54.1061720227964,66.9127849326607,70.8288692628864,55.9211322292055,58.0167377873271,91.7090828198843,54.8753270237115,57.5906621753671,57.5628128640983,60.9647902377628,72.285095245343,49.2565060282428,67.0961875942187,91.5461337242583,55.0638318082834,73.8197746958297,40.1247093570246,67.9262059531108,78.5967778728728,77.8634866779954,41.7686621910279,44.3711061556603,45.0155324513373,47.9241320717574,50.7552283668906,52.014170435649,52.0044571306495,49.153640440413,26.9459991166053,29.8787606665154,31.1433489770189,33.0985555965638,34.4778589039741,32.0391993200393,36.423438144206,36.8213393614212,54.0704154231191,64.8516725929082,65.3576048609863,45.7747957303459,34.7098568772022,42.6747085662605,40.7200945206562,44.0751879114185,39.6466480120562,42.3211779445742,52.3133132729257,53.8288228312651,46.4058776756015,51.5485837208359,53.9107583479941,54.2401953347983,50.2769764016506,63.4796360736558,68.1339433347772,43.0141279745409,131.837094410535,71.401652999157,37.7520203447364,43.6604943097624,37.8870336286954,45.3787930402521,46.6993892074228,53.2631753115166,83.0425857702895,62.4209038404001,64.5931486616693,62.4723322209214,61.4136874425228,78.1972885529173,81.4840448027597,117.891633766585,32.433211062977,49.0126119095737,42.8289395557706,51.1164832891739,47.9062643304036,53.6539022160937,51.9804335161395,66.2769564428414,71.5914198956669,80.8251423687793,56.6224517736454,51.0546023491248,55.0365186316968,53.2923206352103,62.0751971448819,69.2178448489436,62.1287078346664,61.8546695519243,59.1793577728879,38.7131592595195,51.7565543498476,37.9583766621873,49.6139900252151,52.2838277350521,47.5403145833067,43.419916922703,64.8483697484782,42.6355676483591,36.3411897465718,42.436271443797,37.5504397261603,39.6989830137103,39.0391571053063,61.4670990752066,51.7043272668306,60.9027896534131,57.8820810226678,68.167138921747,70.9735275468831,81.8713671571356,66.3481649332798,66.3564934258826,45.7340773907704,45.8054998865856,66.4679442549459,71.3819171346517,32.7869890753351,71.4492723988376,63.4171521026676,60.1275666216823,66.3504065017021,59.0252930942804,69.9587836618717,60.0122245272325,59.9119838478844,68.387870751247,67.198922250909,60.7297288037215,47.4079884595617,42.3796136728067,37.7897745700296,57.0796625484973,83.6294371541766,34.4748503340074,40.8136801902414,35.8349651536206,31.5973025382427,42.426050416262,60.2137923081955,49.4405872089407,42.0666906493971,58.1507634601901,66.4137234022492,58.7872596514665,38.8101150559318,48.7965564824851,37.6433769807816,44.7964403216028,48.0592033170561,47.0893678469466,47.0610198922066,35.0134691481789,50.4544172336977,57.4064912040953,67.2611614067634,61.9972311059965,41.4963576608477,42.3999862244936,51.2107355773455,53.50993331689,79.2827875633194,65.8259822137309,73.3036078622788,44.5795634800561,48.3357716434947,97.1981238144206,76.4120732960531,94.9429418807069,61.7021700877695,56.1205323817869,64.5393877666659,84.01101438533,33.847951313181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| ||
|short_description=p1@Becn1 | |short_description=p1@Becn1 | ||
}} | }} |
Latest revision as of 17:18, 26 September 2015
Short description: | p1@Becn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Becn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 0bp_to_ENSMUST00000041403, ENSMUST00000122817, ENSMUST00000130916, ENSMUST00000137614, ENSMUST00000139669, ENSMUST00000139997, ENSMUST00000164036, ENSMUST00000167667, ENSMUST00000167818, ENSMUST00000170502, ENSMUST00000172233, NM_019584, uc007loj.1, uc007lok.1, uc007lol.1_5end |
EntrezGene: | Becn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-09 | 25 |
endo-epithelial cell | 7.44e-08 | 15 |
endodermal cell | 9.55e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.36e-09 | 15 |
organ component layer | 6.97e-09 | 24 |
intestinal mucosa | 1.89e-08 | 13 |
wall of intestine | 1.89e-08 | 13 |
gastrointestinal system mucosa | 1.89e-08 | 13 |
digestive system | 8.01e-08 | 116 |
digestive tract | 8.01e-08 | 116 |
primitive gut | 8.01e-08 | 116 |
endoderm-derived structure | 9.89e-08 | 118 |
endoderm | 9.89e-08 | 118 |
presumptive endoderm | 9.89e-08 | 118 |
intestine | 2.57e-07 | 31 |
unilaminar epithelium | 2.98e-07 | 66 |
subdivision of digestive tract | 4.26e-07 | 114 |