FFCP PHASE1:Mm9::chr4:134409493..134409529,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=366 | |MCL_coexpression_id=366 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:134409493..134409529,+ | |||
|description=CAGE_peak_at_chr4:134409493..134409529,+ | |description=CAGE_peak_at_chr4:134409493..134409529,+ | ||
|id=chr4:134409493..134409529,+ | |id=chr4:134409493..134409529,+ | ||
|ontology_enrichment_celltype=CL:0000144!6.04e-13!121;CL:0000012!6.04e-13!121;CL:0000063!1.55e-12!66;CL:0002371!1.79e-11!118;CL:0000548!9.73e-11!115;CL:0000004!9.73e-11!115;CL:0000255!9.73e-11!115;CL:0000034!1.35e-10!97;CL:0000988!1.85e-10!32;CL:0002032!1.85e-10!32;CL:0000037!1.85e-10!32;CL:0000566!1.85e-10!32;CL:0000837!1.85e-10!32;CL:0000723!4.92e-10!91;CL:0000048!4.92e-10!91;CL:0002563!1.27e-09!9;CL:0002251!1.27e-09!9;CL:0000838!5.43e-09!12;CL:0002031!8.70e-09!25;CL:0000084!4.91e-08!11;CL:0000827!4.91e-08!11;CL:0000542!5.40e-08!13;CL:0000051!5.40e-08!13;CL:0000075!1.96e-07!7;CL:0000066!5.18e-07!25;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9;CL:0000239!7.49e-07!6;CL:0000677!7.49e-07!6;CL:0000212!7.49e-07!6;CL:0000584!7.49e-07!6 | |ontology_enrichment_celltype=CL:0000144!6.04e-13!121;CL:0000012!6.04e-13!121;CL:0000063!1.55e-12!66;CL:0002371!1.79e-11!118;CL:0000548!9.73e-11!115;CL:0000004!9.73e-11!115;CL:0000255!9.73e-11!115;CL:0000034!1.35e-10!97;CL:0000988!1.85e-10!32;CL:0002032!1.85e-10!32;CL:0000037!1.85e-10!32;CL:0000566!1.85e-10!32;CL:0000837!1.85e-10!32;CL:0000723!4.92e-10!91;CL:0000048!4.92e-10!91;CL:0002563!1.27e-09!9;CL:0002251!1.27e-09!9;CL:0000838!5.43e-09!12;CL:0002031!8.70e-09!25;CL:0000084!4.91e-08!11;CL:0000827!4.91e-08!11;CL:0000542!5.40e-08!13;CL:0000051!5.40e-08!13;CL:0000075!1.96e-07!7;CL:0000066!5.18e-07!25;CL:0000791!6.60e-07!9;CL:0000789!6.60e-07!9;CL:0002420!6.60e-07!9;CL:0002419!6.60e-07!9;CL:0000790!6.60e-07!9;CL:0000239!7.49e-07!6;CL:0000677!7.49e-07!6;CL:0000212!7.49e-07!6;CL:0000584!7.49e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.60e-30,9;CL:0002251,3.60e-30,9;CL:0000239,2.44e-20,6;CL:0000677,2.44e-20,6;CL:0000584,2.44e-20,6;CL:0000223,2.20e-19,20;CL:0000066,5.01e-18,25;CL:0002076,1.56e-17,15;CL:0000075,2.31e-17,7;CL:0000838,5.65e-14,12;CL:0000791,7.38e-14,9;CL:0000789,7.38e-14,9;CL:0002420,7.38e-14,9;CL:0002419,7.38e-14,9;CL:0000790,7.38e-14,9;CL:0000542,7.88e-13,13;CL:0000051,7.88e-13,13;CL:0002250,2.19e-11,3;CL:0000084,3.11e-11,11;CL:0000827,3.11e-11,11;CL:0000624,5.16e-11,8;CL:0002031,3.52e-10,25;CL:0000738,1.35e-09,17;CL:0002087,1.35e-09,17;CL:0000988,2.33e-09,32;CL:0002032,2.33e-09,32;CL:0000037,2.33e-09,32;CL:0000837,2.33e-09,32;CL:0002320,6.78e-09,46;CL:0000134,6.78e-09,46;CL:0000723,7.03e-08,91;CL:0000048,7.03e-08,91;CL:0000219,3.01e-07,54;CL:0000034,3.47e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!2.56e-10!11;UBERON:0003350!1.27e-09!9;UBERON:0004808!1.27e-09!9;UBERON:0001277!1.27e-09!9 | |ontology_enrichment_uberon=UBERON:0000485!2.56e-10!11;UBERON:0003350!1.27e-09!9;UBERON:0004808!1.27e-09!9;UBERON:0001277!1.27e-09!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.60e-30,9;UBERON:0004808,3.60e-30,9;UBERON:0001277,3.60e-30,9;UBERON:0000485,1.98e-24,11;UBERON:0001242,1.88e-20,13;UBERON:0001262,1.88e-20,13;UBERON:0004786,1.88e-20,13;UBERON:0000344,1.56e-17,15;UBERON:0004923,2.06e-10,24;UBERON:0003929,7.98e-10,55;UBERON:0002384,6.78e-09,46;UBERON:0000490,9.71e-08,66;UBERON:0000160,9.85e-08,31;UBERON:0005911,2.75e-07,69 | |||
|phase1_expression=0.160148847104794,2.44282785347553,1.81999695755814,2.41971369045464,2.50447864973174,2.68606835059024,2.33612640595526,4.39019299701359,0.703943610758334,1.17032263160997,0,0.239316476986009,2.56801094896809,3.4968160967599,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0.0850432901510698,0.595745707205312,0.261199789138935,0,0,0.57423196411502,0.430761996159075,2.15471232685889,0,0,0,4.44521471421742,1.23012957516914,0,5.48818077527422,1.16364251750945,6.73758875665818,0.418531630736908,0.7813353445238,0,2.35292595212406,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,5.5368259999053,5.07753499407941,3.36093799142464,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.61245399607477,0.0958454710182364,1.83843757322004,0,0.127687338085188,0,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0,0.294628585473668,0.142371680799103,0.559198337475902,0.151452386666368,0,11.3047150593654,0,2.03991400112325,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,2.44282785347553,1.81999695755814,2.41971369045464,2.50447864973174,2.68606835059024,2.33612640595526,4.39019299701359,0.703943610758334,1.17032263160997,0,0.239316476986009,2.56801094896809,3.4968160967599,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0.0850432901510698,0.595745707205312,0.261199789138935,0,0,0.57423196411502,0.430761996159075,2.15471232685889,0,0,0,4.44521471421742,1.23012957516914,0,5.48818077527422,1.16364251750945,6.73758875665818,0.418531630736908,0.7813353445238,0,2.35292595212406,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,5.5368259999053,5.07753499407941,3.36093799142464,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.61245399607477,0.0958454710182364,1.83843757322004,0,0.127687338085188,0,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0,0.294628585473668,0.142371680799103,0.559198337475902,0.151452386666368,0,11.3047150593654,0,2.03991400112325,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.718890747035522,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0.2604087696879,0.209718688851422,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr4:134409493..134409529,+ | |short_description=p@chr4:134409493..134409529,+ | ||
}} | }} |
Latest revision as of 22:50, 4 August 2015
Short description: | p@chr4:134409493..134409529, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134409493..134409529, + |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.60e-30 | 9 |
gastrointestinal system epithelium | 3.60e-30 | 9 |
intestinal epithelium | 3.60e-30 | 9 |
simple columnar epithelium | 1.98e-24 | 11 |
intestinal mucosa | 1.88e-20 | 13 |
wall of intestine | 1.88e-20 | 13 |
gastrointestinal system mucosa | 1.88e-20 | 13 |
mucosa | 1.56e-17 | 15 |
organ component layer | 2.06e-10 | 24 |
gut epithelium | 7.98e-10 | 55 |
connective tissue | 6.78e-09 | 46 |
unilaminar epithelium | 9.71e-08 | 66 |
intestine | 9.85e-08 | 31 |
endo-epithelium | 2.75e-07 | 69 |