FFCP PHASE1:Mm9::chr2:117168567..117168632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19419 | |EntrezGene=19419 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=547 | |MCL_coexpression_id=547 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z1S3 | |UniProt=Q9Z1S3 | ||
|association_with_transcript=0bp_to_NM_011246,uc008lrl.1_5end | |association_with_transcript=0bp_to_NM_011246,uc008lrl.1_5end | ||
|cluster_id=chr2:117168567..117168632,- | |||
|description=CAGE_peak_1_at_Rasgrp1_5end | |description=CAGE_peak_1_at_Rasgrp1_5end | ||
|id=chr2:117168567..117168632,- | |id=chr2:117168567..117168632,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.53e-12!86;UBERON:0000064!3.01e-12!99;UBERON:0000153!3.57e-11!94;UBERON:0007023!2.98e-09!51;UBERON:0004177!3.85e-09!29;UBERON:0006562!1.29e-08!24;UBERON:0001557!1.29e-08!24;UBERON:0001042!1.29e-08!24;UBERON:0008814!1.29e-08!24;UBERON:0009145!1.29e-08!24;UBERON:0003408!2.14e-08!24;UBERON:0002370!2.75e-08!23;UBERON:0000974!2.75e-08!23;UBERON:0004807!2.75e-08!23;UBERON:0005058!2.75e-08!23;UBERON:0003351!2.75e-08!23;UBERON:0009113!2.75e-08!23;UBERON:0003295!2.75e-08!23;UBERON:0009722!2.75e-08!23;UBERON:0005562!2.75e-08!23;UBERON:0007690!2.75e-08!23;UBERON:0002021!7.93e-08!10;UBERON:0000411!7.93e-08!10;UBERON:0001950!7.93e-08!10;UBERON:0000955!4.60e-07!50;UBERON:0006238!4.60e-07!50;UBERON:0002193!6.20e-07!48;UBERON:0000063!8.76e-07!35 | |ontology_enrichment_uberon=UBERON:0007811!2.53e-12!86;UBERON:0000064!3.01e-12!99;UBERON:0000153!3.57e-11!94;UBERON:0007023!2.98e-09!51;UBERON:0004177!3.85e-09!29;UBERON:0006562!1.29e-08!24;UBERON:0001557!1.29e-08!24;UBERON:0001042!1.29e-08!24;UBERON:0008814!1.29e-08!24;UBERON:0009145!1.29e-08!24;UBERON:0003408!2.14e-08!24;UBERON:0002370!2.75e-08!23;UBERON:0000974!2.75e-08!23;UBERON:0004807!2.75e-08!23;UBERON:0005058!2.75e-08!23;UBERON:0003351!2.75e-08!23;UBERON:0009113!2.75e-08!23;UBERON:0003295!2.75e-08!23;UBERON:0009722!2.75e-08!23;UBERON:0005562!2.75e-08!23;UBERON:0007690!2.75e-08!23;UBERON:0002021!7.93e-08!10;UBERON:0000411!7.93e-08!10;UBERON:0001950!7.93e-08!10;UBERON:0000955!4.60e-07!50;UBERON:0006238!4.60e-07!50;UBERON:0002193!6.20e-07!48;UBERON:0000063!8.76e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.69e-10,29;UBERON:0005057,5.69e-10,29;UBERON:0006562,1.40e-09,24;UBERON:0001557,1.40e-09,24;UBERON:0001042,1.40e-09,24;UBERON:0008814,1.40e-09,24;UBERON:0009145,1.40e-09,24;UBERON:0007023,1.43e-09,51;UBERON:0003408,2.43e-09,24;UBERON:0002370,3.12e-09,23;UBERON:0000974,3.12e-09,23;UBERON:0004807,3.12e-09,23;UBERON:0005058,3.12e-09,23;UBERON:0003351,3.12e-09,23;UBERON:0009113,3.12e-09,23;UBERON:0003295,3.12e-09,23;UBERON:0009722,3.12e-09,23;UBERON:0005562,3.12e-09,23;UBERON:0007690,3.12e-09,23;UBERON:0000077,4.97e-09,35;UBERON:0002021,3.72e-08,10;UBERON:0000411,3.72e-08,10;UBERON:0001950,3.72e-08,10;UBERON:0002193,7.12e-08,48;UBERON:0002405,7.12e-08,48;UBERON:0002390,1.64e-07,45;UBERON:0003061,1.64e-07,45;UBERON:0000072,3.37e-07,27 | |||
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| ||
|short_description=p1@Rasgrp1 | |short_description=p1@Rasgrp1 | ||
}} | }} |
Latest revision as of 13:32, 25 September 2015
Short description: | p1@Rasgrp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rasgrp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:547 |
Association with transcript: | 0bp_to_NM_011246, uc008lrl.1_5end |
EntrezGene: | Rasgrp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.69e-10 | 29 |
immune organ | 5.69e-10 | 29 |
pharynx | 1.40e-09 | 24 |
upper respiratory tract | 1.40e-09 | 24 |
chordate pharynx | 1.40e-09 | 24 |
pharyngeal arch system | 1.40e-09 | 24 |
pharyngeal region of foregut | 1.40e-09 | 24 |
adult organism | 1.43e-09 | 51 |
gland of gut | 2.43e-09 | 24 |
thymus | 3.12e-09 | 23 |
neck | 3.12e-09 | 23 |
respiratory system epithelium | 3.12e-09 | 23 |
hemolymphoid system gland | 3.12e-09 | 23 |
pharyngeal epithelium | 3.12e-09 | 23 |
thymic region | 3.12e-09 | 23 |
pharyngeal gland | 3.12e-09 | 23 |
entire pharyngeal arch endoderm | 3.12e-09 | 23 |
thymus primordium | 3.12e-09 | 23 |
early pharyngeal endoderm | 3.12e-09 | 23 |
mixed endoderm/mesoderm-derived structure | 4.97e-09 | 35 |
occipital lobe | 3.72e-08 | 10 |
visual cortex | 3.72e-08 | 10 |
neocortex | 3.72e-08 | 10 |
hemolymphoid system | 7.12e-08 | 48 |
immune system | 7.12e-08 | 48 |
hematopoietic system | 1.64e-07 | 45 |
blood island | 1.64e-07 | 45 |
segment of respiratory tract | 3.37e-07 | 27 |