FFCP PHASE1:Mm9::chr13:83854861..83854872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |MCL_coexpression_id=100 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:83854861..83854872,+ | |||
|description=CAGE_peak_at_chr13:83854861..83854872,+ | |description=CAGE_peak_at_chr13:83854861..83854872,+ | ||
|id=chr13:83854861..83854872,+ | |id=chr13:83854861..83854872,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.38e-20!23;CL:0000337!9.38e-20!23;CL:0002319!2.12e-13!43;CL:0000221!6.34e-13!44;CL:0000133!6.34e-13!44;CL:0000540!7.18e-12!33;CL:0000047!7.18e-12!33;CL:0000031!7.18e-12!33;CL:0000404!7.18e-12!33;CL:0000055!1.73e-10!50;CL:0002609!5.18e-10!6;CL:0000393!3.84e-09!39;CL:0000211!3.84e-09!39 | |ontology_enrichment_celltype=CL:0000117!9.38e-20!23;CL:0000337!9.38e-20!23;CL:0002319!2.12e-13!43;CL:0000221!6.34e-13!44;CL:0000133!6.34e-13!44;CL:0000540!7.18e-12!33;CL:0000047!7.18e-12!33;CL:0000031!7.18e-12!33;CL:0000404!7.18e-12!33;CL:0000055!1.73e-10!50;CL:0002609!5.18e-10!6;CL:0000393!3.84e-09!39;CL:0000211!3.84e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-31,23;CL:0000337,1.02e-31,23;CL:0002609,4.30e-25,6;CL:0000540,2.37e-21,33;CL:0000047,2.37e-21,33;CL:0000031,2.37e-21,33;CL:0000404,2.37e-21,33;CL:0002319,3.42e-18,43;CL:0000221,1.02e-17,44;CL:0000133,1.02e-17,44;CL:0000393,1.12e-17,39;CL:0000211,1.12e-17,39;CL:0002608,3.14e-13,3;CL:0002613,6.10e-12,3;CL:0002321,4.06e-10,70;CL:0000723,3.82e-07,91;CL:0000048,3.82e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.07e-26!52;UBERON:0005068!3.07e-26!52;UBERON:0006241!3.07e-26!52;UBERON:0007135!3.07e-26!52;UBERON:0002020!2.32e-25!34;UBERON:0001017!5.25e-25!73;UBERON:0005743!5.25e-25!73;UBERON:0000073!5.54e-24!75;UBERON:0001016!5.54e-24!75;UBERON:0000955!4.22e-22!50;UBERON:0006238!4.22e-22!50;UBERON:0002346!4.45e-22!71;UBERON:0003075!4.45e-22!71;UBERON:0007284!4.45e-22!71;UBERON:0000033!1.84e-21!63;UBERON:0002791!1.98e-21!29;UBERON:0003528!1.98e-21!29;UBERON:0001893!1.98e-21!29;UBERON:0002616!3.99e-21!49;UBERON:0004121!5.56e-19!102;UBERON:0000924!5.56e-19!102;UBERON:0006601!5.56e-19!102;UBERON:0003056!6.04e-19!49;UBERON:0003080!1.79e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0000956!1.09e-14!21;UBERON:0001869!1.09e-14!21;UBERON:0000203!1.09e-14!21;UBERON:0007811!1.10e-12!86;UBERON:0000153!1.10e-10!94;UBERON:0002619!8.40e-10!17;UBERON:0001954!8.56e-10!7;UBERON:0003022!8.56e-10!7;UBERON:0002421!8.56e-10!7;UBERON:0000349!8.56e-10!7;UBERON:0002600!8.56e-10!7;UBERON:0003076!1.55e-09!12;UBERON:0003057!1.55e-09!12;UBERON:0002420!6.02e-08!8;UBERON:0007245!6.02e-08!8;UBERON:0010009!6.02e-08!8;UBERON:0010011!6.02e-08!8;UBERON:0000454!6.02e-08!8;UBERON:0000369!2.08e-07!5;UBERON:0002435!2.08e-07!5;UBERON:0000204!2.08e-07!5;UBERON:0010082!2.08e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!3.07e-26!52;UBERON:0005068!3.07e-26!52;UBERON:0006241!3.07e-26!52;UBERON:0007135!3.07e-26!52;UBERON:0002020!2.32e-25!34;UBERON:0001017!5.25e-25!73;UBERON:0005743!5.25e-25!73;UBERON:0000073!5.54e-24!75;UBERON:0001016!5.54e-24!75;UBERON:0000955!4.22e-22!50;UBERON:0006238!4.22e-22!50;UBERON:0002346!4.45e-22!71;UBERON:0003075!4.45e-22!71;UBERON:0007284!4.45e-22!71;UBERON:0000033!1.84e-21!63;UBERON:0002791!1.98e-21!29;UBERON:0003528!1.98e-21!29;UBERON:0001893!1.98e-21!29;UBERON:0002616!3.99e-21!49;UBERON:0004121!5.56e-19!102;UBERON:0000924!5.56e-19!102;UBERON:0006601!5.56e-19!102;UBERON:0003056!6.04e-19!49;UBERON:0003080!1.79e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0000956!1.09e-14!21;UBERON:0001869!1.09e-14!21;UBERON:0000203!1.09e-14!21;UBERON:0007811!1.10e-12!86;UBERON:0000153!1.10e-10!94;UBERON:0002619!8.40e-10!17;UBERON:0001954!8.56e-10!7;UBERON:0003022!8.56e-10!7;UBERON:0002421!8.56e-10!7;UBERON:0000349!8.56e-10!7;UBERON:0002600!8.56e-10!7;UBERON:0003076!1.55e-09!12;UBERON:0003057!1.55e-09!12;UBERON:0002420!6.02e-08!8;UBERON:0007245!6.02e-08!8;UBERON:0010009!6.02e-08!8;UBERON:0010011!6.02e-08!8;UBERON:0000454!6.02e-08!8;UBERON:0000369!2.08e-07!5;UBERON:0002435!2.08e-07!5;UBERON:0000204!2.08e-07!5;UBERON:0010082!2.08e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.78e-27,34;UBERON:0001049,1.31e-21,52;UBERON:0005068,1.31e-21,52;UBERON:0006241,1.31e-21,52;UBERON:0007135,1.31e-21,52;UBERON:0003528,5.74e-21,29;UBERON:0002791,5.74e-21,29;UBERON:0001893,5.74e-21,29;UBERON:0000073,1.08e-20,54;UBERON:0001017,2.03e-20,73;UBERON:0001016,8.76e-20,75;UBERON:0000956,1.05e-17,21;UBERON:0001869,1.05e-17,21;UBERON:0000203,1.05e-17,21;UBERON:0002346,5.76e-17,64;UBERON:0003075,5.76e-17,64;UBERON:0007284,5.76e-17,64;UBERON:0002616,9.66e-17,46;UBERON:0000955,2.50e-16,47;UBERON:0006238,2.50e-16,47;UBERON:0002780,5.40e-15,39;UBERON:0001890,5.40e-15,39;UBERON:0006240,5.40e-15,39;UBERON:0004121,6.85e-15,95;UBERON:0000924,6.85e-15,95;UBERON:0006601,6.85e-15,95;UBERON:0003080,1.46e-14,40;UBERON:0010371,1.76e-14,73;UBERON:0003056,1.87e-11,49;UBERON:0010314,8.02e-11,92;UBERON:0001954,9.88e-10,7;UBERON:0003022,9.88e-10,7;UBERON:0002421,9.88e-10,7;UBERON:0000349,9.88e-10,7;UBERON:0002600,9.88e-10,7;UBERON:0000025,4.22e-08,114;UBERON:0002619,5.49e-08,17;UBERON:0003076,5.94e-08,12;UBERON:0003057,5.94e-08,12;UBERON:0001948,1.26e-07,5;UBERON:0002315,1.26e-07,5;UBERON:0000369,2.35e-07,5;UBERON:0002435,2.35e-07,5;UBERON:0000204,2.35e-07,5;UBERON:0010082,2.35e-07,5;UBERON:0004111,2.37e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,1.15265491596466,4.97710139080693,3.64516033495565,5.04779907243317,0,1.54607978666129,3.06226998037385,2.68367318851062,3.67687514644008,0,0.766124028511126,0,1.18697658957174,1.28082701043374,1.56274011167028,0.558365998002762,0,0.61119299110724,1.47314292736834,0.711858403995515,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,1.21677024134594,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.384341160854549,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,1.3748254587495,0,0,0,0.900642406448441,0,0.51776031175182,0.31136204275253,1.99512436700516,1.02440163452481,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0.50695859978048,0,0.37456602987953,0.192075457214608,0.34461281373368,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0.77468420592983,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,1.15265491596466,4.97710139080693,3.64516033495565,5.04779907243317,0,1.54607978666129,3.06226998037385,2.68367318851062,3.67687514644008,0,0.766124028511126,0,1.18697658957174,1.28082701043374,1.56274011167028,0.558365998002762,0,0.61119299110724,1.47314292736834,0.711858403995515,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,1.21677024134594,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.384341160854549,0.937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,1.3748254587495,0,0,0,0.900642406448441,0,0.51776031175182,0.31136204275253,1.99512436700516,1.02440163452481,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0.50695859978048,0,0.37456602987953,0.192075457214608,0.34461281373368,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0.77468420592983,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr13:83854861..83854872,+ | |short_description=p@chr13:83854861..83854872,+ | ||
}} | }} |
Latest revision as of 09:02, 6 August 2015
Short description: | p@chr13:83854861..83854872, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83854861..83854872, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-31 | 23 |
neuron of cerebral cortex | 4.30e-25 | 6 |
neuron | 2.37e-21 | 33 |
neuronal stem cell | 2.37e-21 | 33 |
neuroblast | 2.37e-21 | 33 |
electrically signaling cell | 2.37e-21 | 33 |
neural cell | 3.42e-18 | 43 |
ectodermal cell | 1.02e-17 | 44 |
neurectodermal cell | 1.02e-17 | 44 |
electrically responsive cell | 1.12e-17 | 39 |
electrically active cell | 1.12e-17 | 39 |
hippocampal neuron | 3.14e-13 | 3 |
striatum neuron | 6.10e-12 | 3 |
embryonic cell | 4.06e-10 | 70 |
somatic stem cell | 3.82e-07 | 91 |
multi fate stem cell | 3.82e-07 | 91 |