FFCP PHASE1:Mm9::chr10:79613230..79613258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59090 | |EntrezGene=59090 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |MCL_coexpression_id=108 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z1J8 | |UniProt=D3Z1J8 | ||
|association_with_transcript=28bp_to_ENSMUST00000153477_5end | |association_with_transcript=28bp_to_ENSMUST00000153477_5end | ||
|cluster_id=chr10:79613230..79613258,+ | |||
|description=CAGE_peak_6_at_Midn_5end | |description=CAGE_peak_6_at_Midn_5end | ||
|id=chr10:79613230..79613258,+ | |id=chr10:79613230..79613258,+ | ||
|ontology_enrichment_celltype=CL:0000540!5.65e-07!33;CL:0000047!5.65e-07!33;CL:0000031!5.65e-07!33;CL:0000404!5.65e-07!33 | |ontology_enrichment_celltype=CL:0000540!5.65e-07!33;CL:0000047!5.65e-07!33;CL:0000031!5.65e-07!33;CL:0000404!5.65e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.51e-11,23;CL:0000337,5.51e-11,23;CL:0000540,5.12e-09,33;CL:0000047,5.12e-09,33;CL:0000031,5.12e-09,33;CL:0000404,5.12e-09,33;CL:0002609,7.69e-09,6;CL:0002319,4.85e-08,43;CL:0000221,1.04e-07,44;CL:0000133,1.04e-07,44;CL:0000393,9.31e-07,39;CL:0000211,9.31e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.02e-08!94 | |ontology_enrichment_uberon=UBERON:0000153!8.02e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.61e-12,43;UBERON:0007811,7.94e-11,36;UBERON:0002370,3.84e-09,23;UBERON:0000974,3.84e-09,23;UBERON:0004807,3.84e-09,23;UBERON:0005058,3.84e-09,23;UBERON:0003351,3.84e-09,23;UBERON:0009113,3.84e-09,23;UBERON:0003295,3.84e-09,23;UBERON:0009722,3.84e-09,23;UBERON:0005562,3.84e-09,23;UBERON:0007690,3.84e-09,23;UBERON:0006562,1.44e-08,24;UBERON:0003408,1.44e-08,24;UBERON:0001557,1.44e-08,24;UBERON:0001042,1.44e-08,24;UBERON:0008814,1.44e-08,24;UBERON:0009145,1.44e-08,24;UBERON:0002346,8.31e-08,64;UBERON:0003075,8.31e-08,64;UBERON:0007284,8.31e-08,64;UBERON:0003056,3.39e-07,49;UBERON:0000072,4.10e-07,27;UBERON:0004121,8.65e-07,95;UBERON:0000924,8.65e-07,95;UBERON:0006601,8.65e-07,95 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,1.29123323441576,0.140788722151667,0,0,0.159544317990673,2.56801094896809,2.18551006047494,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.274228867211478,0.42438965179803,0.255129870453209,0.595745707205312,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.734187008646726,0,1.74420125104357,0.219686182734472,0.388859798148567,0.979904951377538,0,0.335565212115473,0,1.34437519656986,0.257259436035947,0,0,3.84401275633236,3.1739458756322,3.1691570175309,0.338844532069132,0,0.449949858640699,0,0,1.49800055259202,1.53687322128622,4.87341177849845,4.99521971827255,3.99617426567626,1.14260393761521,0.220868540951614,3.91970557487853,5.07980996396653,4.5960939330501,0,0.127687338085188,0,4.08847491963601,3.38504281328916,4.68822033501084,0.279182999001381,0,0,1.47314292736834,1.13897344639282,3.54158947068071,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0.517875767294343,0,1.21439728736295,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0.255457055208591,0.479260498023681,0.599902730993408,0.635351135365324,0.149790639404823,0,5.6544458450789,0,0.255715457330331,0.83115217823824,0.811206315338788,0.916554274652847,0.124406970610093,0.505445516867349,0,1.17108398666433,1.83921683546778,1.44049703844279,1.65775299619287,2.9255694635071,2.69038812598185,1.78033276663485,0,3.01795190105979,1.89106080167819,2.28736461413134,0.876782929710299,1.94633074457919,0.348252166522167,0.411564272815887,1.59227413454795,0,0.257347907114715,0.284163499395593,1.24275463521301,2.11073453982987,1.44049649168812,0.710234206755631,0.787056926989615,1.54267112887378,0,1.3413670069981,0.700592054203017,0.822799249567402,0.164167464079095,0.405344047729279,0.146199987425332,0,0.134206418760372,0.420579897128254,3.19004298375782,0,0.264450566663544,1.70630600428187,2.09013004674395,0.77320476793256,0.403367049246685,0.667134131534611,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,1.13800740571849,0.685491075658373,0,0.814605311381257,1.35766741017338,1.33258057791605,0.505892296994058,0,0.156998727841375,0.123397163921801,0.296452627087149,0.83422552858047,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,1.32643988239339,1.30371981153621,0.678980343100753,0.704070744865506,0.837531287209079,0,0.195133647857799,0.630540576424764,0.44292937929755,0.956728611944923,0,0.172684981865896,0.433947175744535,0,0,0,0,0.321101179975584,0.234423373184406,0.655739781506702,0,0.315508219416257,2.34263246577983,0.646270193198397,0.955875191810208,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,1.58115111178609,1.28528526568723,0.425820255624806,0.890328018336276,1.14020871547503,0.329940245945071,1.32745138339963,0.728341908464944,0.906970670894253,0,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.62054984628179,0.905510786479282,1.92903331528433,1.06404140185364,1.42695054081656,0.164549020602121,0.913394847343798,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,0,0.741701208042039,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.690999869022119,0,2.84702394223022,1.42323626988794,0.324016022465404,0.627264888043406,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0.506868376472335,0.938857909166032,0.651021924219751,0.838874755405687,0.483168241652012,0.864090018773596,1.89606672376907,1.01362607645082,1.43795340030758,1.81889152168913,1.43221356533985,1.19208812868759,1.68273629327956,1.62458479892035,2.42319479875554,1.752756553065,1.81487133246313,1.8516997340553,1.05833025804362,1.8700304349051,0,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.36630324853453,0.214368379079066,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,1.97195960409936,3.19219898720825,2.04880326904961,0.972426868273176,1.46729213839588,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0,0.943131706930381,0.468207537349412,0.768301828858431,0.574354689556133,0,1.62238056322798,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,1.06485483695602,0.238436189947321,0.726732083161643,0.470546902076653,0.338458431566706,0.73171189149109,0,0.271608227691724,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0.309873682371932,0.771626443924566,1.99848462350357,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0 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|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,1.29123323441576,0.140788722151667,0,0,0.159544317990673,2.56801094896809,2.18551006047494,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,0.274228867211478,0.42438965179803,0.255129870453209,0.595745707205312,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.734187008646726,0,1.74420125104357,0.219686182734472,0.388859798148567,0.979904951377538,0,0.335565212115473,0,1.34437519656986,0.257259436035947,0,0,3.84401275633236,3.1739458756322,3.1691570175309,0.338844532069132,0,0.449949858640699,0,0,1.49800055259202,1.53687322128622,4.87341177849845,4.99521971827255,3.99617426567626,1.14260393761521,0.220868540951614,3.91970557487853,5.07980996396653,4.5960939330501,0,0.127687338085188,0,4.08847491963601,3.38504281328916,4.68822033501084,0.279182999001381,0,0,1.47314292736834,1.13897344639282,3.54158947068071,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0.517875767294343,0,1.21439728736295,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0.255457055208591,0.479260498023681,0.599902730993408,0.635351135365324,0.149790639404823,0,5.6544458450789,0,0.255715457330331,0.83115217823824,0.811206315338788,0.916554274652847,0.124406970610093,0.505445516867349,0,1.17108398666433,1.83921683546778,1.44049703844279,1.65775299619287,2.9255694635071,2.69038812598185,1.78033276663485,0,3.01795190105979,1.89106080167819,2.28736461413134,0.876782929710299,1.94633074457919,0.348252166522167,0.411564272815887,1.59227413454795,0,0.257347907114715,0.284163499395593,1.24275463521301,2.11073453982987,1.44049649168812,0.710234206755631,0.787056926989615,1.54267112887378,0,1.3413670069981,0.700592054203017,0.822799249567402,0.164167464079095,0.405344047729279,0.146199987425332,0,0.134206418760372,0.420579897128254,3.19004298375782,0,0.264450566663544,1.70630600428187,2.09013004674395,0.77320476793256,0.403367049246685,0.667134131534611,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,1.13800740571849,0.685491075658373,0,0.814605311381257,1.35766741017338,1.33258057791605,0.505892296994058,0,0.156998727841375,0.123397163921801,0.296452627087149,0.83422552858047,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,1.32643988239339,1.30371981153621,0.678980343100753,0.704070744865506,0.837531287209079,0,0.195133647857799,0.630540576424764,0.44292937929755,0.956728611944923,0,0.172684981865896,0.433947175744535,0,0,0,0,0.321101179975584,0.234423373184406,0.655739781506702,0,0.315508219416257,2.34263246577983,0.646270193198397,0.955875191810208,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,1.58115111178609,1.28528526568723,0.425820255624806,0.890328018336276,1.14020871547503,0.329940245945071,1.32745138339963,0.728341908464944,0.906970670894253,0,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.62054984628179,0.905510786479282,1.92903331528433,1.06404140185364,1.42695054081656,0.164549020602121,0.913394847343798,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,0,0.741701208042039,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.690999869022119,0,2.84702394223022,1.42323626988794,0.324016022465404,0.627264888043406,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.66183396182839,0.388902376688095,0.129159823477731,0.506868376472335,0.938857909166032,0.651021924219751,0.838874755405687,0.483168241652012,0.864090018773596,1.89606672376907,1.01362607645082,1.43795340030758,1.81889152168913,1.43221356533985,1.19208812868759,1.68273629327956,1.62458479892035,2.42319479875554,1.752756553065,1.81487133246313,1.8516997340553,1.05833025804362,1.8700304349051,0,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.36630324853453,0.214368379079066,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,1.97195960409936,3.19219898720825,2.04880326904961,0.972426868273176,1.46729213839588,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0,0.943131706930381,0.468207537349412,0.768301828858431,0.574354689556133,0,1.62238056322798,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,1.06485483695602,0.238436189947321,0.726732083161643,0.470546902076653,0.338458431566706,0.73171189149109,0,0.271608227691724,0.561142271657738,0.474540072496697,0.689531376628944,0.409231043169689,0.309873682371932,0.771626443924566,1.99848462350357,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0 | ||
|short_description=p6@Midn | |short_description=p6@Midn | ||
}} | }} |
Latest revision as of 09:33, 26 September 2015
Short description: | p6@Midn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Midn_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 28bp_to_ENSMUST00000153477_5end |
EntrezGene: | Midn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.51e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.51e-11 | 23 |
neuron | 5.12e-09 | 33 |
neuronal stem cell | 5.12e-09 | 33 |
neuroblast | 5.12e-09 | 33 |
electrically signaling cell | 5.12e-09 | 33 |
neuron of cerebral cortex | 7.69e-09 | 6 |
neural cell | 4.85e-08 | 43 |
ectodermal cell | 1.04e-07 | 44 |
neurectodermal cell | 1.04e-07 | 44 |
electrically responsive cell | 9.31e-07 | 39 |
electrically active cell | 9.31e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.61e-12 | 43 |
craniocervical region | 7.94e-11 | 36 |
thymus | 3.84e-09 | 23 |
neck | 3.84e-09 | 23 |
respiratory system epithelium | 3.84e-09 | 23 |
hemolymphoid system gland | 3.84e-09 | 23 |
pharyngeal epithelium | 3.84e-09 | 23 |
thymic region | 3.84e-09 | 23 |
pharyngeal gland | 3.84e-09 | 23 |
entire pharyngeal arch endoderm | 3.84e-09 | 23 |
thymus primordium | 3.84e-09 | 23 |
early pharyngeal endoderm | 3.84e-09 | 23 |
pharynx | 1.44e-08 | 24 |
gland of gut | 1.44e-08 | 24 |
upper respiratory tract | 1.44e-08 | 24 |
chordate pharynx | 1.44e-08 | 24 |
pharyngeal arch system | 1.44e-08 | 24 |
pharyngeal region of foregut | 1.44e-08 | 24 |
neurectoderm | 8.31e-08 | 64 |
neural plate | 8.31e-08 | 64 |
presumptive neural plate | 8.31e-08 | 64 |
pre-chordal neural plate | 3.39e-07 | 49 |
segment of respiratory tract | 4.10e-07 | 27 |
ectoderm-derived structure | 8.65e-07 | 95 |
ectoderm | 8.65e-07 | 95 |
presumptive ectoderm | 8.65e-07 | 95 |