FFCP PHASE1:Mm9::chr3:144695729..144695745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23844 | |EntrezGene=23844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=274 | |MCL_coexpression_id=274 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D7Z6 | |UniProt=Q9D7Z6 | ||
|association_with_transcript=0bp_to_ENSMUST00000029919,NM_017474,uc008rqf.2_5end | |association_with_transcript=0bp_to_ENSMUST00000029919,NM_017474,uc008rqf.2_5end | ||
|cluster_id=chr3:144695729..144695745,- | |||
|description=CAGE_peak_1_at_Clca3_5end | |description=CAGE_peak_1_at_Clca3_5end | ||
|id=chr3:144695729..144695745,- | |id=chr3:144695729..144695745,- | ||
|ontology_enrichment_celltype=CL:0002563!2.87e-07!9;CL:0002251!2.87e-07!9 | |ontology_enrichment_celltype=CL:0002563!2.87e-07!9;CL:0002251!2.87e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.48e-08,9;CL:0002251,2.48e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.27e-17!59;UBERON:0000160!3.59e-16!43;UBERON:0001007!2.12e-13!128;UBERON:0001555!2.12e-13!128;UBERON:0007026!2.12e-13!128;UBERON:0004119!2.59e-13!130;UBERON:0000925!2.59e-13!130;UBERON:0006595!2.59e-13!130;UBERON:0000344!1.37e-12!15;UBERON:0004921!3.25e-12!126;UBERON:0004185!3.25e-12!126;UBERON:0001242!6.66e-11!13;UBERON:0000060!6.66e-11!13;UBERON:0001262!6.66e-11!13;UBERON:0004786!6.66e-11!13;UBERON:0003350!2.87e-07!9;UBERON:0004808!2.87e-07!9;UBERON:0001277!2.87e-07!9;UBERON:0004923!6.21e-07!24 | |ontology_enrichment_uberon=UBERON:0005409!1.27e-17!59;UBERON:0000160!3.59e-16!43;UBERON:0001007!2.12e-13!128;UBERON:0001555!2.12e-13!128;UBERON:0007026!2.12e-13!128;UBERON:0004119!2.59e-13!130;UBERON:0000925!2.59e-13!130;UBERON:0006595!2.59e-13!130;UBERON:0000344!1.37e-12!15;UBERON:0004921!3.25e-12!126;UBERON:0004185!3.25e-12!126;UBERON:0001242!6.66e-11!13;UBERON:0000060!6.66e-11!13;UBERON:0001262!6.66e-11!13;UBERON:0004786!6.66e-11!13;UBERON:0003350!2.87e-07!9;UBERON:0004808!2.87e-07!9;UBERON:0001277!2.87e-07!9;UBERON:0004923!6.21e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.91e-25,31;UBERON:0005409,1.06e-23,47;UBERON:0000344,1.24e-14,15;UBERON:0001242,1.23e-12,13;UBERON:0001262,1.23e-12,13;UBERON:0004786,1.23e-12,13;UBERON:0001007,1.55e-12,116;UBERON:0001555,1.55e-12,116;UBERON:0007026,1.55e-12,116;UBERON:0004119,5.00e-12,118;UBERON:0000925,5.00e-12,118;UBERON:0006595,5.00e-12,118;UBERON:0004921,2.88e-11,114;UBERON:0003350,2.48e-08,9;UBERON:0004808,2.48e-08,9;UBERON:0001277,2.48e-08,9;UBERON:0004923,3.52e-07,24 | |||
|phase1_expression=0,66.3053274514786,110.564815171657,55.3509506691499,45.5815114251176,1689.87275106508,1448.63198433285,0,0,0,0,0,0,0,0,0,0,0,0,0,69.480368053424,0,0,741.404887224647,741.680205690161,153.894166382825,891.246570053126,704.159988417485,2380.23335211054,1596.61087202916,1092.24449548803,0,0,0,6.06588401477677,38.8989070138872,8.77928231928187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.6764282278785,0,0,0,0,0,0,0,0,0,0,322.683644086063,0.258937883647172,0,0,0,0,0,0,3.14166478324189,0.247194967734374,0,0,0.808834249737046,0,0,987.876334456047,0,0,841.4755398571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.820837320395476,0.324275238183423,0,0,0,0,0,1612.44366096093,415.980741361755,0.213288250535234,0.232236671860439,14.9486255133628,96.8080918192044,168.117801146722,279.251219133237,566.587699484147,250.836508044669,197.549474117012,224.422900462418,279.773465015937,520.416437610794,1174.71030106896,1286.0543426767,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,0,1.11642284300551,0,2.02063102357689,3.04975602987251,0,26.2349530036579,0,0,1.01847051465113,0,0,0,0.195133647857799,4.72905432318573,7.9727288273559,165.514049866472,24.5794972073607,171.130817029103,47.5895402733173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7881596831101,0,0,83.9697925930206,0,0,0.906970670894253,0,0,0.307435147943927,53.75308497899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.441056796109924,0.16488625294148,0,0.241251699712623,0.119372344003136,6.23735419031233,539.239547765224,0,0,0,0,0,0,0,0,0,0,406.689683274438,0.316335993581135,0.813277868507395,16.4168118049138,10.0362382086945,41.2705245480276,5.52943820177765,10.827602700019,95.8026747661548,382.104941264205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,1.08175904567972,0.443068581523732,2.3222283488074,0.609654453239999,1.31074040677893,1.55932609183604,1.34696578296461,1.16876902181569,0,0,0,0,0.772758376128762,9.00875882165674,1082.24294779527,67.3116710308267,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,1.45864030240976,0.209613162627982,1.10306105070008,4.88942801163553,5.35691148821125,6.4183841918363,4.04315538822076,6.33698249725599,3.39527414494937,4.86935838843389,4.54578582074572,4.99688579913835,5.23923060411381,3.94006708212509,5.40145817298374,4.53294490883637,4.85756436443511,4.4573002810104,5.6792257970988,5.48403236878838,4.36039249896986,4.79957840118186,5.4153349050673,6.0366231048015,4.99832451731901,3.25929873230068,3.92799590160417,5.21994079746366,3.64466584789585,4.09231043169689,6.04253680625267,9.25951732709479,0,25.2646137121041,26.8588817560373,9.37312827137333,2.20591419119516,10.2021847672985 | |phase1_expression=0,66.3053274514786,110.564815171657,55.3509506691499,45.5815114251176,1689.87275106508,1448.63198433285,0,0,0,0,0,0,0,0,0,0,0,0,0,69.480368053424,0,0,741.404887224647,741.680205690161,153.894166382825,891.246570053126,704.159988417485,2380.23335211054,1596.61087202916,1092.24449548803,0,0,0,6.06588401477677,38.8989070138872,8.77928231928187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.6764282278785,0,0,0,0,0,0,0,0,0,0,322.683644086063,0.258937883647172,0,0,0,0,0,0,3.14166478324189,0.247194967734374,0,0,0.808834249737046,0,0,987.876334456047,0,0,841.4755398571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.820837320395476,0.324275238183423,0,0,0,0,0,1612.44366096093,415.980741361755,0.213288250535234,0.232236671860439,14.9486255133628,96.8080918192044,168.117801146722,279.251219133237,566.587699484147,250.836508044669,197.549474117012,224.422900462418,279.773465015937,520.416437610794,1174.71030106896,1286.0543426767,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0,0,1.11642284300551,0,2.02063102357689,3.04975602987251,0,26.2349530036579,0,0,1.01847051465113,0,0,0,0.195133647857799,4.72905432318573,7.9727288273559,165.514049866472,24.5794972073607,171.130817029103,47.5895402733173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7881596831101,0,0,83.9697925930206,0,0,0.906970670894253,0,0,0.307435147943927,53.75308497899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.441056796109924,0.16488625294148,0,0.241251699712623,0.119372344003136,6.23735419031233,539.239547765224,0,0,0,0,0,0,0,0,0,0,406.689683274438,0.316335993581135,0.813277868507395,16.4168118049138,10.0362382086945,41.2705245480276,5.52943820177765,10.827602700019,95.8026747661548,382.104941264205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,1.08175904567972,0.443068581523732,2.3222283488074,0.609654453239999,1.31074040677893,1.55932609183604,1.34696578296461,1.16876902181569,0,0,0,0,0.772758376128762,9.00875882165674,1082.24294779527,67.3116710308267,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,1.45864030240976,0.209613162627982,1.10306105070008,4.88942801163553,5.35691148821125,6.4183841918363,4.04315538822076,6.33698249725599,3.39527414494937,4.86935838843389,4.54578582074572,4.99688579913835,5.23923060411381,3.94006708212509,5.40145817298374,4.53294490883637,4.85756436443511,4.4573002810104,5.6792257970988,5.48403236878838,4.36039249896986,4.79957840118186,5.4153349050673,6.0366231048015,4.99832451731901,3.25929873230068,3.92799590160417,5.21994079746366,3.64466584789585,4.09231043169689,6.04253680625267,9.25951732709479,0,25.2646137121041,26.8588817560373,9.37312827137333,2.20591419119516,10.2021847672985 | ||
|short_description=p1@Clca3 | |short_description=p1@Clca3 | ||
}} | }} |
Latest revision as of 18:19, 1 October 2015
Short description: | p1@Clca3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clca3_5end |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | 0bp_to_ENSMUST00000029919, NM_017474, uc008rqf.2_5end |
EntrezGene: | Clca3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.48e-08 | 9 |
epithelial cell of alimentary canal | 2.48e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.91e-25 | 31 |
gastrointestinal system | 1.06e-23 | 47 |
mucosa | 1.24e-14 | 15 |
intestinal mucosa | 1.23e-12 | 13 |
wall of intestine | 1.23e-12 | 13 |
gastrointestinal system mucosa | 1.23e-12 | 13 |
digestive system | 1.55e-12 | 116 |
digestive tract | 1.55e-12 | 116 |
primitive gut | 1.55e-12 | 116 |
endoderm-derived structure | 5.00e-12 | 118 |
endoderm | 5.00e-12 | 118 |
presumptive endoderm | 5.00e-12 | 118 |
subdivision of digestive tract | 2.88e-11 | 114 |
epithelium of mucosa | 2.48e-08 | 9 |
gastrointestinal system epithelium | 2.48e-08 | 9 |
intestinal epithelium | 2.48e-08 | 9 |
organ component layer | 3.52e-07 | 24 |