FFCP PHASE1:Mm9::chr8:81334181..81334194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78651 | |EntrezGene=78651 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=270 | |MCL_coexpression_id=270 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENSMUST00000126174_5end | |association_with_transcript=-72bp_to_ENSMUST00000126174_5end | ||
|cluster_id=chr8:81334181..81334194,- | |||
|description=CAGE_peak_8_at_Lsm6_5end | |description=CAGE_peak_8_at_Lsm6_5end | ||
|id=chr8:81334181..81334194,- | |id=chr8:81334181..81334194,- | ||
|ontology_enrichment_celltype=CL:0000117!8.79e-17!23;CL:0000337!8.79e-17!23;CL:0000540!8.76e-12!33;CL:0000047!8.76e-12!33;CL:0000031!8.76e-12!33;CL:0000404!8.76e-12!33;CL:0000221!3.00e-11!44;CL:0000133!3.00e-11!44;CL:0002319!2.48e-10!43;CL:0000393!3.06e-09!39;CL:0000211!3.06e-09!39;CL:0000055!3.68e-08!50 | |ontology_enrichment_celltype=CL:0000117!8.79e-17!23;CL:0000337!8.79e-17!23;CL:0000540!8.76e-12!33;CL:0000047!8.76e-12!33;CL:0000031!8.76e-12!33;CL:0000404!8.76e-12!33;CL:0000221!3.00e-11!44;CL:0000133!3.00e-11!44;CL:0002319!2.48e-10!43;CL:0000393!3.06e-09!39;CL:0000211!3.06e-09!39;CL:0000055!3.68e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-26,23;CL:0000337,1.43e-26,23;CL:0000540,4.44e-18,33;CL:0000047,4.44e-18,33;CL:0000031,4.44e-18,33;CL:0000404,4.44e-18,33;CL:0002614,3.12e-17,3;CL:0002610,4.51e-17,3;CL:0000393,4.57e-15,39;CL:0000211,4.57e-15,39;CL:0002319,1.60e-13,43;CL:0000221,3.52e-13,44;CL:0000133,3.52e-13,44;CL:0002611,1.48e-11,2;CL:0002321,1.07e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-16!73;UBERON:0005743!2.26e-16!73;UBERON:0000073!1.08e-15!75;UBERON:0001016!1.08e-15!75;UBERON:0003076!1.93e-13!12;UBERON:0003057!1.93e-13!12;UBERON:0001049!5.56e-13!52;UBERON:0005068!5.56e-13!52;UBERON:0006241!5.56e-13!52;UBERON:0007135!5.56e-13!52;UBERON:0004121!1.03e-12!102;UBERON:0000924!1.03e-12!102;UBERON:0006601!1.03e-12!102;UBERON:0002298!2.52e-11!6;UBERON:0002240!1.80e-10!6;UBERON:0005174!1.80e-10!6;UBERON:0001137!1.80e-10!6;UBERON:0002346!2.15e-10!71;UBERON:0003075!2.15e-10!71;UBERON:0007284!2.15e-10!71;UBERON:0002616!2.59e-10!49;UBERON:0002420!3.52e-10!8;UBERON:0007245!3.52e-10!8;UBERON:0010009!3.52e-10!8;UBERON:0010011!3.52e-10!8;UBERON:0000454!3.52e-10!8;UBERON:0000955!5.42e-10!50;UBERON:0006238!5.42e-10!50;UBERON:0001948!6.49e-09!5;UBERON:0002315!6.49e-09!5;UBERON:0000033!1.30e-08!63;UBERON:0002950!2.67e-08!4;UBERON:0001891!2.67e-08!4;UBERON:0009616!2.67e-08!4 | |ontology_enrichment_uberon=UBERON:0001017!2.26e-16!73;UBERON:0005743!2.26e-16!73;UBERON:0000073!1.08e-15!75;UBERON:0001016!1.08e-15!75;UBERON:0003076!1.93e-13!12;UBERON:0003057!1.93e-13!12;UBERON:0001049!5.56e-13!52;UBERON:0005068!5.56e-13!52;UBERON:0006241!5.56e-13!52;UBERON:0007135!5.56e-13!52;UBERON:0004121!1.03e-12!102;UBERON:0000924!1.03e-12!102;UBERON:0006601!1.03e-12!102;UBERON:0002298!2.52e-11!6;UBERON:0002240!1.80e-10!6;UBERON:0005174!1.80e-10!6;UBERON:0001137!1.80e-10!6;UBERON:0002346!2.15e-10!71;UBERON:0003075!2.15e-10!71;UBERON:0007284!2.15e-10!71;UBERON:0002616!2.59e-10!49;UBERON:0002420!3.52e-10!8;UBERON:0007245!3.52e-10!8;UBERON:0010009!3.52e-10!8;UBERON:0010011!3.52e-10!8;UBERON:0000454!3.52e-10!8;UBERON:0000955!5.42e-10!50;UBERON:0006238!5.42e-10!50;UBERON:0001948!6.49e-09!5;UBERON:0002315!6.49e-09!5;UBERON:0000033!1.30e-08!63;UBERON:0002950!2.67e-08!4;UBERON:0001891!2.67e-08!4;UBERON:0009616!2.67e-08!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.91e-26,12;UBERON:0003057,1.91e-26,12;UBERON:0002950,4.64e-22,4;UBERON:0001891,4.64e-22,4;UBERON:0009616,4.64e-22,4;UBERON:0010286,4.64e-22,4;UBERON:0000073,5.44e-20,54;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0002038,3.12e-17,3;UBERON:0009663,3.12e-17,3;UBERON:0009661,3.12e-17,3;UBERON:0000125,3.12e-17,3;UBERON:0002308,3.12e-17,3;UBERON:0004684,4.51e-17,3;UBERON:0002275,4.51e-17,3;UBERON:0001049,3.92e-15,52;UBERON:0005068,3.92e-15,52;UBERON:0006241,3.92e-15,52;UBERON:0007135,3.92e-15,52;UBERON:0002240,3.07e-14,6;UBERON:0005174,3.07e-14,6;UBERON:0001137,3.07e-14,6;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0004733,1.15e-13,6;UBERON:0004732,1.15e-13,6;UBERON:0002028,1.15e-13,6;UBERON:0007277,1.15e-13,6;UBERON:0002346,5.94e-12,64;UBERON:0003075,5.94e-12,64;UBERON:0007284,5.94e-12,64;UBERON:0002256,1.48e-11,2;UBERON:0002420,5.78e-11,8;UBERON:0007245,5.78e-11,8;UBERON:0010009,5.78e-11,8;UBERON:0010011,5.78e-11,8;UBERON:0000454,5.78e-11,8;UBERON:0001896,6.94e-11,2;UBERON:0002298,6.94e-11,2;UBERON:0005290,6.94e-11,2;UBERON:0010096,6.94e-11,2;UBERON:0010371,3.00e-10,73;UBERON:0001948,4.06e-10,5;UBERON:0002315,4.06e-10,5;UBERON:0002616,5.12e-08,46;UBERON:0000955,8.03e-08,47;UBERON:0006238,8.03e-08,47;UBERON:0010314,9.75e-08,92;UBERON:0002020,5.14e-07,34 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,1.42825492201902,3.3130281142742,0,0,0,6.60695285996332,2.42605942361857,3.68655679814984,0.659431438650969,1.00636407962651,0.52091337055676,6.14202597803038,7.31591393041184,3.0559649555362,0.589257170947335,1.85083185038834,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,1.64769703345305,0,0.125654352112864,0,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,1.42825492201902,3.3130281142742,0,0,0,6.60695285996332,2.42605942361857,3.68655679814984,0.659431438650969,1.00636407962651,0.52091337055676,6.14202597803038,7.31591393041184,3.0559649555362,0.589257170947335,1.85083185038834,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,1.64769703345305,0,0.125654352112864,0,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p8@Lsm6 | |short_description=p8@Lsm6 | ||
}} | }} |
Latest revision as of 19:37, 25 September 2015
Short description: | p8@Lsm6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lsm6_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | -72bp_to_ENSMUST00000126174_5end |
EntrezGene: | Lsm6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-26 | 23 |
neuron | 4.44e-18 | 33 |
neuronal stem cell | 4.44e-18 | 33 |
neuroblast | 4.44e-18 | 33 |
electrically signaling cell | 4.44e-18 | 33 |
neuron of the substantia nigra | 3.12e-17 | 3 |
raphe nuclei neuron | 4.51e-17 | 3 |
electrically responsive cell | 4.57e-15 | 39 |
electrically active cell | 4.57e-15 | 39 |
neural cell | 1.60e-13 | 43 |
ectodermal cell | 3.52e-13 | 44 |
neurectodermal cell | 3.52e-13 | 44 |
neuron of the dorsal spinal cord | 1.48e-11 | 2 |
embryonic cell | 1.07e-07 | 70 |