FFCP PHASE1:Hg19::chr2:110371455..110371562,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:110371455..110371562,-
|short_description=p1@SEPT10
|description=CAGE_peak_1_at_SEPT10_5end
|association_with_transcript=0bp_to_ENST00000334001,ENST0000039...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151011 | |EntrezGene=151011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14349 | |HGNC=14349 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z371,Q9P0V9,F8WC85,E7EX04,F5GYV2,F5H1F2 | |UniProt=B7Z371,Q9P0V9,F8WC85,E7EX04,F5GYV2,F5H1F2 | ||
|association_with_transcript=0bp_to_ENST00000334001,ENST00000397714,ENST00000425498,ENST00000437928,ENST00000461295,ENST00000493445_5end | |||
|cluster_id=chr2:110371455..110371562,- | |||
|description=CAGE_peak_1_at_SEPT10_5end | |||
|id=chr2:110371455..110371562,- | |||
|ontology_enrichment_celltype=CL:0000055!3.17e-21!180;CL:0000220!8.33e-16!246;CL:0002321!1.06e-15!248;CL:0000057!4.31e-12!75;CL:0000066!1.73e-09!254;CL:0000222!1.81e-08!119;CL:0002620!3.07e-08!23;CL:0000680!9.74e-07!57;CL:0000056!9.74e-07!57;CL:0000355!9.74e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.94e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.47e-16,250;CL:0000057,3.13e-12,76;CL:0000066,1.76e-09,253;CL:0000222,1.92e-08,121;CL:0002620,3.01e-08,23;CL:0000680,8.24e-07,58;CL:0000056,8.24e-07,58;CL:0000355,8.24e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.86e-17!659;UBERON:0000467!1.90e-12!625;UBERON:0002100!2.51e-12!216;UBERON:0000480!4.07e-12!626;UBERON:0000475!1.11e-11!365;UBERON:0000914!2.45e-11!83;UBERON:0002329!2.45e-11!83;UBERON:0003077!2.45e-11!83;UBERON:0003059!2.45e-11!83;UBERON:0007282!2.45e-11!83;UBERON:0009618!2.45e-11!83;UBERON:0007285!2.45e-11!83;UBERON:0003102!4.34e-11!95;UBERON:0005256!6.96e-11!143;UBERON:0003104!9.02e-11!238;UBERON:0009142!9.02e-11!238;UBERON:0000486!5.82e-10!82;UBERON:0000481!2.72e-09!347;UBERON:0000922!2.84e-09!612;UBERON:0002050!3.79e-09!605;UBERON:0005423!3.79e-09!605;UBERON:0000923!7.75e-09!604;UBERON:0005291!7.75e-09!604;UBERON:0006598!7.75e-09!604;UBERON:0002532!7.75e-09!604;UBERON:0004290!6.04e-08!70;UBERON:0000490!3.17e-07!138;UBERON:0002049!6.37e-07!79;UBERON:0007798!6.37e-07!79;UBERON:0002385!6.62e-07!63;UBERON:0001015!6.62e-07!63;UBERON:0000383!6.62e-07!63;UBERON:0002199!8.11e-07!45;UBERON:0002416!8.11e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.64e-12,99;UBERON:0000486,4.84e-10,83;UBERON:0003104,5.94e-10,160;UBERON:0009142,5.94e-10,160;UBERON:0002100,5.28e-09,199;UBERON:0000490,1.40e-08,148;UBERON:0004923,2.66e-08,66;UBERON:0005256,2.84e-08,122;UBERON:0007524,4.95e-08,73;UBERON:0002329,5.07e-08,71;UBERON:0003059,5.07e-08,71;UBERON:0007282,5.07e-08,71;UBERON:0004290,5.07e-08,71;UBERON:0009618,5.07e-08,71;UBERON:0003077,1.10e-07,72;UBERON:0007285,1.10e-07,72;UBERON:0005423,2.92e-07,581;UBERON:0000922,3.12e-07,592;UBERON:0002199,4.74e-07,46;UBERON:0002416,4.74e-07,46;UBERON:0002385,5.57e-07,64;UBERON:0001015,5.57e-07,64;UBERON:0000383,5.57e-07,64;UBERON:0002050,6.63e-07,564;UBERON:0002097,7.70e-07,41;UBERON:0002049,8.16e-07,78;UBERON:0007798,8.16e-07,78 | |||
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| ||
|short_description=p1@SEPT10 | |||
}} | }} |
Latest revision as of 07:22, 16 September 2015
Short description: | p1@SEPT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPT10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334001, ENST00000397714, ENST00000425498, ENST00000437928, ENST00000461295, ENST00000493445_5end |
EntrezGene: | SEPT10 |
HGNC: | 14349 |
UniProt: | B7Z371Q9P0V9F8WC85E7EX04F5GYV2F5H1F2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.47e-16 | 250 |
fibroblast | 3.13e-12 | 76 |
epithelial cell | 1.76e-09 | 253 |
mesodermal cell | 1.92e-08 | 121 |
skin fibroblast | 3.01e-08 | 23 |
muscle precursor cell | 8.24e-07 | 58 |
myoblast | 8.24e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.24e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.64e-12 | 99 |
multilaminar epithelium | 4.84e-10 | 83 |
mesenchyme | 5.94e-10 | 160 |
entire embryonic mesenchyme | 5.94e-10 | 160 |
trunk | 5.28e-09 | 199 |
unilaminar epithelium | 1.40e-08 | 148 |
organ component layer | 2.66e-08 | 66 |
trunk mesenchyme | 2.84e-08 | 122 |
dense mesenchyme tissue | 4.95e-08 | 73 |
somite | 5.07e-08 | 71 |
presomitic mesoderm | 5.07e-08 | 71 |
presumptive segmental plate | 5.07e-08 | 71 |
dermomyotome | 5.07e-08 | 71 |
trunk paraxial mesoderm | 5.07e-08 | 71 |
paraxial mesoderm | 1.10e-07 | 72 |
presumptive paraxial mesoderm | 1.10e-07 | 72 |
developing anatomical structure | 2.92e-07 | 581 |
embryo | 3.12e-07 | 592 |
integument | 4.74e-07 | 46 |
integumental system | 4.74e-07 | 46 |
muscle tissue | 5.57e-07 | 64 |
musculature | 5.57e-07 | 64 |
musculature of body | 5.57e-07 | 64 |
embryonic structure | 6.63e-07 | 564 |
skin of body | 7.70e-07 | 41 |
vasculature | 8.16e-07 | 78 |
vascular system | 8.16e-07 | 78 |