FFCP PHASE1:Hg19::chr2:109605543..109605554,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:109605543..109605554,-
|short_description=p4@EDAR
|description=CAGE_peak_4_at_EDAR_5end
|association_with_transcript=170bp_to_ENST00000409271_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10913 | |EntrezGene=10913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2895 | |HGNC=2895 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC98 | |UniProt=E9PC98 | ||
|association_with_transcript=170bp_to_ENST00000409271_5end | |||
|cluster_id=chr2:109605543..109605554,- | |||
|coexpression_cluster_id=C525 | |||
|description=CAGE_peak_4_at_EDAR_5end | |||
|id=chr2:109605543..109605554,- | |||
|ontology_enrichment_celltype=CL:0000239!5.32e-07!3;CL:1000615!5.32e-07!3;CL:0002306!5.32e-07!3;CL:0002251!9.90e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.73e-29;1!CL:1000600;2.73e-29;1!CL:1000415;2.21e-15;2!CL:0000239;7.78e-11;3!CL:1000615;7.78e-11;3!CL:0002306;7.78e-11;3!CL:0002178;7.78e-11;3!CL:0000083;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.37e-29,1;CL:1000600,2.37e-29,1;CL:1000415,1.78e-15,2;CL:0000239,7.42e-11,3;CL:1000615,7.42e-11,3;CL:0002306,7.42e-11,3;CL:0002178,8.17e-11,3;CL:0000083,1.70e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.35e-18!14;DOID:4929!3.42e-10!2;DOID:305!4.30e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.15e-15;2!DOID:3119;4.38e-09;14!DOID:1793;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.15e-15,2;DOID:3119,4.75e-09,14;DOID:1793,1.70e-08,4;DOID:305,5.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.25e-12!12;UBERON:0000974!1.78e-10!10;UBERON:0003343!5.25e-10!4;UBERON:0004785!5.25e-10!4;UBERON:0000341!9.00e-10!2;UBERON:0004119!9.35e-09!169;UBERON:0000925!9.35e-09!169;UBERON:0006595!9.35e-09!169;UBERON:0000365!1.75e-08!5;UBERON:0003729!4.31e-08!5;UBERON:0001007!3.72e-07!155;UBERON:0001555!3.72e-07!155;UBERON:0007026!3.72e-07!155;UBERON:0005910!3.93e-07!6;UBERON:0006853!5.32e-07!3;UBERON:0007685!5.32e-07!3;UBERON:0004134!5.32e-07!3;UBERON:0002110!8.21e-07!3;UBERON:0006242!8.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.73e-29;1!UBERON:0001256;2.73e-29;1!UBERON:0001259;2.73e-29;1!UBERON:0001255;2.21e-15;2!UBERON:0001556;2.21e-15;2!UBERON:0002075;7.17e-15;18!UBERON:0006853;7.78e-11;3!UBERON:0007685;7.78e-11;3!UBERON:0004134;7.78e-11;3!UBERON:0002110;1.04e-10;3!UBERON:0001052;2.35e-08;4!UBERON:0000945;5.23e-07;5!UBERON:0010039;5.23e-07;5!UBERON:0000365;6.21e-07;5!UBERON:0004907;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.37e-29,1;UBERON:0001256,2.37e-29,1;UBERON:0001259,2.37e-29,1;UBERON:0001255,2.05e-15,2;UBERON:0001556,2.05e-15,2;UBERON:0002075,6.53e-15,18;UBERON:0006853,7.42e-11,3;UBERON:0007685,7.42e-11,3;UBERON:0004134,7.42e-11,3;UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0001052,2.61e-08,4;UBERON:0000365,6.04e-07,5;UBERON:0004907,6.77e-07,5;UBERON:0001046,6.97e-07,19 | |||
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| ||
|short_description=p4@EDAR | |||
}} | }} |
Latest revision as of 07:00, 16 September 2015
Short description: | p4@EDAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EDAR_5end |
Coexpression cluster: | C525_tubular_vagina_cervix_rectum_Placental_colon_Hair |
Association with transcript: | 170bp_to_ENST00000409271_5end |
EntrezGene: | EDAR |
HGNC: | 2895 |
UniProt: | E9PC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.37e-29 | 1 |
lower urinary tract cell | 2.37e-29 | 1 |
epithelial cell of gall bladder | 1.78e-15 | 2 |
brush border epithelial cell | 7.42e-11 | 3 |
kidney cortex tubule cell | 7.42e-11 | 3 |
epithelial cell of proximal tubule | 7.42e-11 | 3 |
epithelial cell of stomach | 8.17e-11 | 3 |
epithelial cell of pancreas | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.37e-29 | 1 |
wall of urinary bladder | 2.37e-29 | 1 |
mucosa of urinary bladder | 2.37e-29 | 1 |
urinary bladder | 2.05e-15 | 2 |
lower urinary tract | 2.05e-15 | 2 |
viscus | 6.53e-15 | 18 |
renal cortex tubule | 7.42e-11 | 3 |
region of nephron tubule | 7.42e-11 | 3 |
proximal tubule | 7.42e-11 | 3 |
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
rectum | 2.61e-08 | 4 |
urothelium | 6.04e-07 | 5 |
lower digestive tract | 6.77e-07 | 5 |
hindgut | 6.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.15e-15 | 2 |
gastrointestinal system cancer | 4.75e-09 | 14 |
pancreatic cancer | 1.70e-08 | 4 |
carcinoma | 5.42e-07 | 106 |