FFCP PHASE1:Hg19::chr1:193090923..193090934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79577 | |EntrezGene=79577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16783 | |HGNC=16783 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P1J9 | |UniProt=Q6P1J9 | ||
|association_with_transcript=-153bp_to_NM_024529,uc001gtb.2_5end | |association_with_transcript=-153bp_to_NM_024529,uc001gtb.2_5end | ||
|cluster_id=chr1:193090923..193090934,+ | |||
|description=CAGE_peak_8_at_CDC73_5end | |description=CAGE_peak_8_at_CDC73_5end | ||
|id=chr1:193090923..193090934,+ | |id=chr1:193090923..193090934,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.29e-22;7!CL:0000586;3.29e-22;7!CL:0002322;2.22e-11;5!CL:0000775;2.69e-09;3!CL:0000167;2.49e-07;1!CL:0000164;2.49e-07;1!CL:0000502;2.49e-07;1!CL:0000172;2.49e-07;1!CL:0000173;2.49e-07;1 | |ontology_enrichment_celltype_v019=CL:0000039;3.29e-22;7!CL:0000586;3.29e-22;7!CL:0002322;2.22e-11;5!CL:0000775;2.69e-09;3!CL:0000167;2.49e-07;1!CL:0000164;2.49e-07;1!CL:0000502;2.49e-07;1!CL:0000172;2.49e-07;1!CL:0000173;2.49e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.60e-22,7;CL:0000586,1.60e-22,7;CL:0002322,4.38e-11,5;CL:0000775,2.15e-09,3;CL:0000167,2.66e-07,1;CL:0000164,2.66e-07,1;CL:0000502,2.66e-07,1;CL:0000172,2.66e-07,1;CL:0000173,2.66e-07,1;CL:0002351,2.66e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.14e-10;10!UBERON:0005564;4.14e-10;10!CL:0002351;2.49e-07;1 | |ontology_enrichment_development_v019=UBERON:0009117;4.14e-10;10!UBERON:0005564;4.14e-10;10!CL:0002351;2.49e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.22e-09;22!DOID:2994;1.22e-09;22!DOID:1799;2.49e-07;1!DOID:10165;2.49e-07;1!DOID:3371;2.49e-07;1!DOID:4549;2.49e-07;1!DOID:5861;2.49e-07;1!DOID:6496;2.49e-07;1!DOID:1798;2.49e-07;1!DOID:4430;2.49e-07;1 | |ontology_enrichment_disease_v019=DOID:3095;1.22e-09;22!DOID:2994;1.22e-09;22!DOID:1799;2.49e-07;1!DOID:10165;2.49e-07;1!DOID:3371;2.49e-07;1!DOID:4549;2.49e-07;1!DOID:5861;2.49e-07;1!DOID:6496;2.49e-07;1!DOID:1798;2.49e-07;1!DOID:4430;2.49e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,9.54e-10,22;DOID:2994,9.54e-10,22;DOID:4430,2.66e-07,1;DOID:3371,3.20e-07,1;DOID:4549,3.20e-07,1;DOID:5861,3.20e-07,1;DOID:6496,3.20e-07,1;DOID:1799,4.09e-07,1;DOID:10165,4.09e-07,1;DOID:1798,4.09e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.32e-12;8!UBERON:0003135;3.36e-09;11!UBERON:0002171;2.49e-07;1!UBERON:0006518;2.49e-07;1!UBERON:0008949;2.49e-07;1!UBERON:0000101;2.49e-07;1!UBERON:0002167;2.49e-07;1!UBERON:0003101;8.43e-07;22!UBERON:0000079;8.43e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.32e-12;8!UBERON:0003135;3.36e-09;11!UBERON:0002171;2.49e-07;1!UBERON:0006518;2.49e-07;1!UBERON:0008949;2.49e-07;1!UBERON:0000101;2.49e-07;1!UBERON:0002167;2.49e-07;1!UBERON:0003101;8.43e-07;22!UBERON:0000079;8.43e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.42e-13,8;UBERON:0003135,2.44e-09,11;UBERON:0002171,2.07e-07,1;UBERON:0006518,2.07e-07,1;UBERON:0008949,2.07e-07,1;UBERON:0000101,2.07e-07,1;UBERON:0002167,2.07e-07,1;UBERON:0003101,7.43e-07,22;UBERON:0000079,7.43e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0.382067028739756,0.410502947249729,0.314843125254717,0,0.767658796194425,0.309632246632152,0,0,0,0,0.426507697462265,0.293600439334847,0.553995408531877,0.601633342410425,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0.205601498999509,0.83593247695339,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.541607727530031,0.128091319725675,0.650296737799391,0.164437904603676,0.276350017785848,0.869409257205157,0,0,0,0.453237370790265,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,1.5062593682237,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.423863802319124,0,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.975789649036763,1.19276791489337,1.04574548582567,1.0366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,1.49801404789436,0,5.8018171881045,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,1.07857100409308,0.213455115606889,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0,1.0877350463246,0.40101294060657,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.824328093181778,0.27470839445503,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0.330569830721956,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0.229723400206959,1.52234282769651,0,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,1.08006287447623,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0.318852545457645,0.798317485731266,0,0.846694330895531,0,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0,0.447352215784832,0.166849141711909,0.586164286206121,0,1.23087398947712,0,0,0,0,0,0.849523652246594,0,0,1.67121139316383,0.296964680832639,4.30024982938925,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.492339221844278,0,0.359473404589307,0.358042349351218,0,0.197286811273867,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0.262379999988587,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0,0.694499979733169,0,0.120596438625408,0,0.774054819518572,0.886642856860642,0.658156191461918,0,0.139423744278603,0.0769502585037971,0,3.68902247020896,2.69272933229316,7.71396340646257,0,0.274792780205587,2.66517388009317,0,0,0,0.902382642468723,1.76456280885966,1.00692952185506,0.948768663620925,0.158936578980379,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0.586993856796269,0,0,0,0.61214552326098,0,0,0.207376382794494,0,0.330991955875499,0,0,0,0.416024019039416,0.173559738335131,0.391969589657511,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,1.1473296469895,0.225980740780532,0.137041924646751,0.19871461170299,0.189932387867636,0.586654148204409,0.0801588202515337,0,0,0,0.114536596165916,0.171594997861965,0,0,0.471388069233591,0.135904206073614,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,0,1.16495949527454,0.157566364614447,0.247247575143499,0.202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| ||
|short_description=p8@CDC73 | |short_description=p8@CDC73 | ||
}} | }} |
Latest revision as of 11:06, 19 September 2015
Short description: | p8@CDC73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDC73_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_NM_024529, uc001gtb.2_5end |
EntrezGene: | CDC73 |
HGNC: | 16783 |
UniProt: | Q6P1J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.60e-22 | 7 |
germ cell | 1.60e-22 | 7 |
embryonic stem cell | 4.38e-11 | 5 |
neutrophil | 2.15e-09 | 3 |
peptide hormone secreting cell | 2.66e-07 | 1 |
enteroendocrine cell | 2.66e-07 | 1 |
type D enteroendocrine cell | 2.66e-07 | 1 |
somatostatin secreting cell | 2.66e-07 | 1 |
pancreatic D cell | 2.66e-07 | 1 |
progenitor cell of endocrine pancreas | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 8.42e-13 | 8 |
male reproductive organ | 2.44e-09 | 11 |
lower lobe of right lung | 2.07e-07 | 1 |
right lung lobe | 2.07e-07 | 1 |
lower lobe of lung | 2.07e-07 | 1 |
lobe of lung | 2.07e-07 | 1 |
right lung | 2.07e-07 | 1 |
male organism | 7.43e-07 | 22 |
male reproductive system | 7.43e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.54e-10 | 22 |
germ cell cancer | 9.54e-10 | 22 |
somatostatinoma | 2.66e-07 | 1 |
chondrosarcoma | 3.20e-07 | 1 |
extraosseous chondrosarcoma | 3.20e-07 | 1 |
myxoid chondrosarcoma | 3.20e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.20e-07 | 1 |
islet cell tumor | 4.09e-07 | 1 |
endocrine pancreas cancer | 4.09e-07 | 1 |
pancreatic endocrine carcinoma | 4.09e-07 | 1 |