FFCP PHASE1:Hg19::chr16:80586313..80586337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:80586313..80586337,- | |||
|coexpression_cluster_id=C441 | |coexpression_cluster_id=C441 | ||
|description=CAGE_peak_at_chr16:80586313..80586337,- | |description=CAGE_peak_at_chr16:80586313..80586337,- | ||
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|ontology_enrichment_celltype=CL:0002076!1.00e-16!43;CL:0002159!4.67e-16!13;CL:0002166!1.48e-14!3;CL:0002621!9.07e-14!3;CL:0000223!2.82e-13!59;CL:0002251!3.84e-12!21;CL:0000240!7.44e-12!6;CL:0000311!7.44e-12!6;CL:0000079!7.44e-12!6;CL:0000237!7.44e-12!6;CL:0000036!7.44e-12!6;CL:0000357!7.44e-12!6;CL:0000114!7.44e-12!6;CL:0000066!2.02e-09!254;CL:0000076!3.18e-09!62;CL:0000312!1.65e-08!5;CL:0002077!2.46e-07!33;CL:0000221!3.67e-07!71;CL:0002231!5.18e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.00e-16!43;CL:0002159!4.67e-16!13;CL:0002166!1.48e-14!3;CL:0002621!9.07e-14!3;CL:0000223!2.82e-13!59;CL:0002251!3.84e-12!21;CL:0000240!7.44e-12!6;CL:0000311!7.44e-12!6;CL:0000079!7.44e-12!6;CL:0000237!7.44e-12!6;CL:0000036!7.44e-12!6;CL:0000357!7.44e-12!6;CL:0000114!7.44e-12!6;CL:0000066!2.02e-09!254;CL:0000076!3.18e-09!62;CL:0000312!1.65e-08!5;CL:0002077!2.46e-07!33;CL:0000221!3.67e-07!71;CL:0002231!5.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.53e-21;3!CL:0002159;1.11e-17;14!CL:0000312;4.38e-13;5!CL:0000240;4.60e-11;6!CL:0000311;4.60e-11;6!CL:0000079;4.60e-11;6!CL:0000237;4.60e-11;6!CL:0002535;6.67e-09;2!CL:0000362;1.13e-07;9!CL:0002077;1.99e-07;34 | |ontology_enrichment_celltype_v019=CL:0002166;2.53e-21;3!CL:0002159;1.11e-17;14!CL:0000312;4.38e-13;5!CL:0000240;4.60e-11;6!CL:0000311;4.60e-11;6!CL:0000079;4.60e-11;6!CL:0000237;4.60e-11;6!CL:0002535;6.67e-09;2!CL:0000362;1.13e-07;9!CL:0002077;1.99e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.76e-21,3;CL:0002159,1.23e-17,14;CL:0000312,6.32e-13,5;CL:0000076,2.65e-11,63;CL:0000240,6.24e-11,6;CL:0000311,6.24e-11,6;CL:0000079,6.24e-11,6;CL:0000237,6.24e-11,6;CL:0000036,6.24e-11,6;CL:0000357,6.24e-11,6;CL:0000114,6.24e-11,6;CL:0002535,6.94e-09,2;CL:0000362,1.38e-07,9;CL:0002077,1.97e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;4.60e-11;6!CL:0000114;4.60e-11;6!UBERON:0008814;6.67e-09;2!UBERON:0010056;6.67e-09;2 | |ontology_enrichment_development_v019=CL:0000357;4.60e-11;6!CL:0000114;4.60e-11;6!UBERON:0008814;6.67e-09;2!UBERON:0010056;6.67e-09;2 | ||
|ontology_enrichment_disease=DOID:1749!2.66e-19!14 | |ontology_enrichment_disease=DOID:1749!2.66e-19!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.69e-27;14!DOID:3151;4.72e-17;1!DOID:3149;4.72e-17;1!DOID:1799;5.52e-17;1!DOID:10165;5.52e-17;1!DOID:1798;5.52e-17;1!DOID:3451;3.43e-09;2!DOID:4159;3.43e-09;2!DOID:0060122;3.43e-09;2 | |ontology_enrichment_disease_v019=DOID:1749;5.69e-27;14!DOID:3151;4.72e-17;1!DOID:3149;4.72e-17;1!DOID:1799;5.52e-17;1!DOID:10165;5.52e-17;1!DOID:1798;5.52e-17;1!DOID:3451;3.43e-09;2!DOID:4159;3.43e-09;2!DOID:0060122;3.43e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.97e-27,14;DOID:3151,4.72e-17,1;DOID:3149,4.72e-17,1;DOID:1799,5.53e-17,1;DOID:10165,5.53e-17,1;DOID:1798,5.53e-17,1;DOID:3451,3.43e-09,2;DOID:4159,3.43e-09,2;DOID:0060122,3.43e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.26e-14!5;UBERON:0001949!9.07e-14!3;UBERON:0001708!4.99e-11!4;UBERON:0001704!4.99e-11!4;UBERON:0003343!6.30e-11!4;UBERON:0004785!6.30e-11!4;UBERON:0000166!2.12e-09!21;UBERON:0000165!8.79e-09!28;UBERON:0000930!8.79e-09!28;UBERON:0000161!1.09e-08!35;UBERON:0003102!3.35e-08!95;UBERON:0002090!1.76e-07!6;UBERON:0001004!2.26e-07!72;UBERON:0000974!3.22e-07!10 | |ontology_enrichment_uberon=UBERON:0003729!1.26e-14!5;UBERON:0001949!9.07e-14!3;UBERON:0001708!4.99e-11!4;UBERON:0001704!4.99e-11!4;UBERON:0003343!6.30e-11!4;UBERON:0004785!6.30e-11!4;UBERON:0000166!2.12e-09!21;UBERON:0000165!8.79e-09!28;UBERON:0000930!8.79e-09!28;UBERON:0000161!1.09e-08!35;UBERON:0003102!3.35e-08!95;UBERON:0002090!1.76e-07!6;UBERON:0001004!2.26e-07!72;UBERON:0000974!3.22e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.96e-16;4!UBERON:0008895;2.96e-16;4!UBERON:0003343;4.18e-16;4!UBERON:0004785;4.18e-16;4!UBERON:0011159;3.33e-13;5!UBERON:0000974;4.60e-11;6!UBERON:0006955;6.67e-09;2!UBERON:0004801;6.67e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0001708;2.96e-16;4!UBERON:0008895;2.96e-16;4!UBERON:0003343;4.18e-16;4!UBERON:0004785;4.18e-16;4!UBERON:0011159;3.33e-13;5!UBERON:0000974;4.60e-11;6!UBERON:0006955;6.67e-09;2!UBERON:0004801;6.67e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.26e-16,4;UBERON:0008895,2.26e-16,4;UBERON:0003343,4.18e-16,4;UBERON:0004785,4.18e-16,4;UBERON:0011159,2.68e-13,5;UBERON:0010188,3.06e-11,6;UBERON:0002539,3.06e-11,6;UBERON:0008816,3.06e-11,6;UBERON:0003102,3.18e-09,99;UBERON:0006955,6.94e-09,2;UBERON:0004801,6.94e-09,2;UBERON:0008814,2.99e-08,18;UBERON:0000974,5.43e-07,10 | |||
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| ||
|short_description=p@chr16:80586313..80586337,- | |short_description=p@chr16:80586313..80586337,- | ||
}} | }} |
Latest revision as of 12:37, 25 July 2015
Short description: | p@chr16:80586313..80586337, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:80586313..80586337, - |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.76e-21 | 3 |
general ecto-epithelial cell | 1.23e-17 | 14 |
keratinocyte | 6.32e-13 | 5 |
squamous epithelial cell | 2.65e-11 | 63 |
stratified squamous epithelial cell | 6.24e-11 | 6 |
keratin accumulating cell | 6.24e-11 | 6 |
stratified epithelial cell | 6.24e-11 | 6 |
keratinizing barrier epithelial cell | 6.24e-11 | 6 |
epithelial fate stem cell | 6.24e-11 | 6 |
stratified epithelial stem cell | 6.24e-11 | 6 |
surface ectodermal cell | 6.24e-11 | 6 |
epithelial cell of cervix | 6.94e-09 | 2 |
epidermal cell | 1.38e-07 | 9 |
ecto-epithelial cell | 1.97e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.26e-16 | 4 |
splanchnocranium | 2.26e-16 | 4 |
mucosa of oral region | 4.18e-16 | 4 |
respiratory system mucosa | 4.18e-16 | 4 |
primary subdivision of cranial skeletal system | 2.68e-13 | 5 |
protuberance | 3.06e-11 | 6 |
pharyngeal arch | 3.06e-11 | 6 |
embryonic head | 3.06e-11 | 6 |
surface structure | 3.18e-09 | 99 |
uterine epithelium | 6.94e-09 | 2 |
cervix epithelium | 6.94e-09 | 2 |
pharyngeal arch system | 2.99e-08 | 18 |
neck | 5.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.97e-27 | 14 |
skin squamous cell carcinoma | 4.72e-17 | 1 |
keratoacanthoma | 4.72e-17 | 1 |
islet cell tumor | 5.53e-17 | 1 |
endocrine pancreas cancer | 5.53e-17 | 1 |
pancreatic endocrine carcinoma | 5.53e-17 | 1 |
skin carcinoma | 3.43e-09 | 2 |
skin cancer | 3.43e-09 | 2 |
integumentary system cancer | 3.43e-09 | 2 |