FFCP PHASE1:Hg19::chr8:18248786..18248805,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10 | |EntrezGene=10 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7646 | |HGNC=7646 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWF9 | |UniProt=E7EWF9 | ||
|association_with_transcript=0bp_to_ENST00000520116_5end | |association_with_transcript=0bp_to_ENST00000520116_5end | ||
|cluster_id=chr8:18248786..18248805,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_NAT2_5end | |description=CAGE_peak_1_at_NAT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.44e-09;12 | |ontology_enrichment_celltype_v019=CL:0000182;4.44e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.45e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.08e-12;1!UBERON:0005425;4.31e-12;1 | |ontology_enrichment_development_v019=UBERON:0001045;3.08e-12;1!UBERON:0005425;4.31e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.47e-08!11;UBERON:0000160!7.59e-08!27;UBERON:0001155!1.02e-07!9;UBERON:0005409!1.70e-07!35;UBERON:0002417!3.05e-07!61;UBERON:0000916!3.05e-07!61 | |ontology_enrichment_uberon=UBERON:0000059!3.47e-08!11;UBERON:0000160!7.59e-08!27;UBERON:0001155!1.02e-07!9;UBERON:0005409!1.70e-07!35;UBERON:0002417!3.05e-07!61;UBERON:0000916!3.05e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.95e-29;17!UBERON:0005409;6.32e-23;22!UBERON:0002108;9.55e-21;4!UBERON:0004921;5.53e-14;33!UBERON:0001154;3.08e-12;1!UBERON:0001153;3.08e-12;1!UBERON:0009854;3.08e-12;1!UBERON:0000941;4.31e-12;1!UBERON:0001785;4.31e-12;1!UBERON:0002464;4.31e-12;1!UBERON:0004904;4.31e-12;1!UBERON:0001021;4.31e-12;1!UBERON:0001155;1.26e-11;9!UBERON:0001007;2.76e-10;81!UBERON:0002107;8.08e-10;19!UBERON:0006925;8.08e-10;19!UBERON:0000059;1.30e-09;11!UBERON:0002423;1.68e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.95e-29;17!UBERON:0005409;6.32e-23;22!UBERON:0002108;9.55e-21;4!UBERON:0004921;5.53e-14;33!UBERON:0001154;3.08e-12;1!UBERON:0001153;3.08e-12;1!UBERON:0009854;3.08e-12;1!UBERON:0000941;4.31e-12;1!UBERON:0001785;4.31e-12;1!UBERON:0002464;4.31e-12;1!UBERON:0004904;4.31e-12;1!UBERON:0001021;4.31e-12;1!UBERON:0001155;1.26e-11;9!UBERON:0001007;2.76e-10;81!UBERON:0002107;8.08e-10;19!UBERON:0006925;8.08e-10;19!UBERON:0000059;1.30e-09;11!UBERON:0002423;1.68e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-29,17;UBERON:0002108,9.55e-21,4;UBERON:0005409,3.22e-20,25;UBERON:0001154,3.08e-12,1;UBERON:0001153,3.08e-12,1;UBERON:0001045,3.08e-12,1;UBERON:0009854,3.50e-12,23;UBERON:0000941,4.31e-12,1;UBERON:0001785,4.31e-12,1;UBERON:0002464,4.31e-12,1;UBERON:0004904,4.31e-12,1;UBERON:0001021,4.31e-12,1;UBERON:0003902,4.31e-12,1;UBERON:0005425,4.31e-12,1;UBERON:0001155,1.26e-11,9;UBERON:0009856,9.12e-11,26;UBERON:0004921,7.85e-10,118;UBERON:0002107,8.08e-10,19;UBERON:0006925,8.08e-10,19;UBERON:0008836,8.08e-10,19;UBERON:0000059,1.30e-09,11;UBERON:0008835,1.67e-08,22;UBERON:0003894,1.67e-08,22;UBERON:0001007,1.01e-07,145;UBERON:0001555,1.01e-07,145;UBERON:0007026,1.01e-07,145;UBERON:0007499,1.68e-07,25;UBERON:0009497,1.68e-07,25;UBERON:0000015,1.68e-07,25;UBERON:0002423,1.68e-07,25;UBERON:0006235,1.68e-07,25;UBERON:0004161,1.68e-07,25;UBERON:0004119,7.46e-07,160;UBERON:0000925,7.46e-07,160;UBERON:0006595,7.46e-07,160 | |||
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| ||
|short_description=p1@NAT2 | |short_description=p1@NAT2 | ||
}} | }} |
Latest revision as of 06:13, 17 September 2015
Short description: | p1@NAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000520116_5end |
EntrezGene: | NAT2 |
HGNC: | 7646 |
UniProt: | E7EWF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.45e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.95e-29 | 17 |
small intestine | 9.55e-21 | 4 |
gastrointestinal system | 3.22e-20 | 25 |
vermiform appendix | 3.08e-12 | 1 |
caecum | 3.08e-12 | 1 |
midgut | 3.08e-12 | 1 |
digestive tract diverticulum | 3.50e-12 | 23 |
cranial nerve II | 4.31e-12 | 1 |
cranial nerve | 4.31e-12 | 1 |
nerve trunk | 4.31e-12 | 1 |
nerve connecting eye with brain | 4.31e-12 | 1 |
nerve | 4.31e-12 | 1 |
retinal neural layer | 4.31e-12 | 1 |
presumptive neural retina | 4.31e-12 | 1 |
colon | 1.26e-11 | 9 |
sac | 9.12e-11 | 26 |
subdivision of digestive tract | 7.85e-10 | 118 |
liver | 8.08e-10 | 19 |
digestive gland | 8.08e-10 | 19 |
liver bud | 8.08e-10 | 19 |
large intestine | 1.30e-09 | 11 |
hepatic diverticulum | 1.67e-08 | 22 |
liver primordium | 1.67e-08 | 22 |
digestive system | 1.01e-07 | 145 |
digestive tract | 1.01e-07 | 145 |
primitive gut | 1.01e-07 | 145 |
epithelial sac | 1.68e-07 | 25 |
epithelium of foregut-midgut junction | 1.68e-07 | 25 |
anatomical boundary | 1.68e-07 | 25 |
hepatobiliary system | 1.68e-07 | 25 |
foregut-midgut junction | 1.68e-07 | 25 |
septum transversum | 1.68e-07 | 25 |
endoderm-derived structure | 7.46e-07 | 160 |
endoderm | 7.46e-07 | 160 |
presumptive endoderm | 7.46e-07 | 160 |