FFCP PHASE1:Hg19::chr17:73636184..73636203,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643008 | |EntrezGene=643008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=40030 | |HGNC=40030 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC9 | |UniProt=Q71RC9 | ||
|association_with_transcript=-5bp_to_AF370408_5end | |association_with_transcript=-5bp_to_AF370408_5end | ||
|cluster_id=chr17:73636184..73636203,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_2_at_C17orf109_5end | |description=CAGE_peak_2_at_C17orf109_5end | ||
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|ontology_enrichment_celltype=CL:0002368!8.19e-09!13;CL:0000066!2.65e-08!254;CL:0002076!5.49e-08!43;CL:0002202!6.38e-08!9;CL:0002632!6.38e-08!9;CL:0000349!1.49e-07!3;CL:0002577!1.49e-07!3;CL:0002541!2.31e-07!3;CL:0002328!9.24e-07!3 | |ontology_enrichment_celltype=CL:0002368!8.19e-09!13;CL:0000066!2.65e-08!254;CL:0002076!5.49e-08!43;CL:0002202!6.38e-08!9;CL:0002632!6.38e-08!9;CL:0000349!1.49e-07!3;CL:0002577!1.49e-07!3;CL:0002541!2.31e-07!3;CL:0002328!9.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.13e-20;19!CL:0002536;1.72e-10;2!CL:0002537;3.24e-10;5!CL:0002541;6.12e-08;3!CL:0002577;1.84e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;4.13e-20;19!CL:0002536;1.72e-10;2!CL:0002537;3.24e-10;5!CL:0002541;6.12e-08;3!CL:0002577;1.84e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.34e-20,19;CL:0002536,1.99e-10,2;CL:0002537,3.25e-10,5;CL:0002541,6.45e-08,3;CL:0002577,1.69e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!2.13e-11!25;DOID:5093!5.57e-09!4;DOID:1612!5.57e-09!4 | |ontology_enrichment_disease=DOID:299!2.13e-11!25;DOID:5093!5.57e-09!4;DOID:1612!5.57e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.40e-11;4!DOID:1612;1.40e-11;4 | |ontology_enrichment_disease_v019=DOID:5093;1.40e-11;4!DOID:1612;1.40e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.98e-11,4;DOID:1612,1.98e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.08e-22!14;UBERON:0000158!8.08e-22!14;UBERON:0003124!1.85e-15!7;UBERON:0000478!2.23e-11!24;UBERON:0004119!4.38e-11!169;UBERON:0000925!4.38e-11!169;UBERON:0006595!4.38e-11!169;UBERON:0001987!8.94e-10!4;UBERON:0004340!8.94e-10!4;UBERON:0000077!1.93e-09!130;UBERON:0000305!1.40e-08!7;UBERON:0004871!1.96e-07!8;UBERON:0000464!2.02e-07!104;UBERON:0000476!2.31e-07!3;UBERON:0000920!2.31e-07!3;UBERON:0001004!3.67e-07!72;UBERON:0001007!6.36e-07!155;UBERON:0001555!6.36e-07!155;UBERON:0007026!6.36e-07!155;UBERON:0004815!9.24e-07!3;UBERON:0002031!9.24e-07!3;UBERON:0004175!9.43e-07!25 | |ontology_enrichment_uberon=UBERON:0005631!8.08e-22!14;UBERON:0000158!8.08e-22!14;UBERON:0003124!1.85e-15!7;UBERON:0000478!2.23e-11!24;UBERON:0004119!4.38e-11!169;UBERON:0000925!4.38e-11!169;UBERON:0006595!4.38e-11!169;UBERON:0001987!8.94e-10!4;UBERON:0004340!8.94e-10!4;UBERON:0000077!1.93e-09!130;UBERON:0000305!1.40e-08!7;UBERON:0004871!1.96e-07!8;UBERON:0000464!2.02e-07!104;UBERON:0000476!2.31e-07!3;UBERON:0000920!2.31e-07!3;UBERON:0001004!3.67e-07!72;UBERON:0001007!6.36e-07!155;UBERON:0001555!6.36e-07!155;UBERON:0007026!6.36e-07!155;UBERON:0004815!9.24e-07!3;UBERON:0002031!9.24e-07!3;UBERON:0004175!9.43e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-24;10!UBERON:0000158;2.41e-24;10!UBERON:0000478;2.23e-19;24!UBERON:0000305;4.18e-18;7!UBERON:0001987;6.23e-12;4!UBERON:0000341;8.85e-11;2!UBERON:0003124;6.12e-08;3!UBERON:0000920;6.12e-08;3!UBERON:0001723;7.50e-08;3!UBERON:0001033;7.50e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-24;10!UBERON:0000158;2.41e-24;10!UBERON:0000478;2.23e-19;24!UBERON:0000305;4.18e-18;7!UBERON:0001987;6.23e-12;4!UBERON:0000341;8.85e-11;2!UBERON:0003124;6.12e-08;3!UBERON:0000920;6.12e-08;3!UBERON:0001723;7.50e-08;3!UBERON:0001033;7.50e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.48e-34,14;UBERON:0000158,1.48e-34,14;UBERON:0000478,2.33e-19,24;UBERON:0003124,3.77e-18,7;UBERON:0000305,4.66e-18,7;UBERON:0004871,9.01e-16,8;UBERON:0001987,5.69e-12,4;UBERON:0004340,5.69e-12,4;UBERON:0000341,6.42e-11,2;UBERON:0000920,6.45e-08,3;UBERON:0001723,7.39e-08,3;UBERON:0001033,7.39e-08,3;UBERON:0010056,7.39e-08,3;UBERON:0004923,3.52e-07,66 | |||
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| ||
|short_description=p2@C17orf109 | |short_description=p2@C17orf109 | ||
}} | }} |
Latest revision as of 11:40, 17 September 2015
Short description: | p2@C17orf109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C17orf109_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -5bp_to_AF370408_5end |
EntrezGene: | C17orf109 |
HGNC: | 40030 |
UniProt: | Q71RC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.34e-20 | 19 |
amniotic epithelial cell | 1.99e-10 | 2 |
amnion mesenchymal stem cell | 3.25e-10 | 5 |
chorionic membrane mesenchymal stem cell | 6.45e-08 | 3 |
placental epithelial cell | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.48e-34 | 14 |
membranous layer | 1.48e-34 | 14 |
extraembryonic structure | 2.33e-19 | 24 |
chorion | 3.77e-18 | 7 |
amnion | 4.66e-18 | 7 |
somatic layer of lateral plate mesoderm | 9.01e-16 | 8 |
placenta | 5.69e-12 | 4 |
allantois | 5.69e-12 | 4 |
throat | 6.42e-11 | 2 |
egg chorion | 6.45e-08 | 3 |
tongue | 7.39e-08 | 3 |
gustatory system | 7.39e-08 | 3 |
future tongue | 7.39e-08 | 3 |
organ component layer | 3.52e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.98e-11 | 4 |
breast cancer | 1.98e-11 | 4 |