FFCP PHASE1:Hg19::chr13:46756758..46756805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=P13796 | |UniProt=P13796 | ||
|association_with_transcript=-299bp_to_ENST00000323076,NM_002298,uc001vba.3_5end | |association_with_transcript=-299bp_to_ENST00000323076,NM_002298,uc001vba.3_5end | ||
|cluster_id=chr13:46756758..46756805,- | |||
|description=CAGE_peak_11_at_LCP1_5end | |description=CAGE_peak_11_at_LCP1_5end | ||
|id=chr13:46756758..46756805,- | |id=chr13:46756758..46756805,- | ||
|ontology_enrichment_celltype=CL:0000988!1.78e-13!182;CL:0000037!3.73e-13!172;CL:0000566!3.73e-13!172;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000945!2.55e-11!24;CL:0000826!2.55e-11!24;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!6.40e-10!52;CL:0000738!2.11e-09!140;CL:0002322!1.04e-07!5;CL:0002031!6.03e-07!124 | |ontology_enrichment_celltype=CL:0000988!1.78e-13!182;CL:0000037!3.73e-13!172;CL:0000566!3.73e-13!172;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000945!2.55e-11!24;CL:0000826!2.55e-11!24;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!6.40e-10!52;CL:0000738!2.11e-09!140;CL:0002322!1.04e-07!5;CL:0002031!6.03e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;9.77e-10;24!CL:0000039;2.17e-07;7!CL:0000586;2.17e-07;7!CL:1001319;6.23e-07;1!CL:1000600;6.23e-07;1 | |ontology_enrichment_celltype_v019=CL:0000945;9.77e-10;24!CL:0000039;2.17e-07;7!CL:0000586;2.17e-07;7!CL:1001319;6.23e-07;1!CL:1000600;6.23e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.45e-10,24;CL:0000826,9.45e-10,24;CL:0000039,1.78e-07,7;CL:0000586,1.78e-07,7;CL:1001319,5.90e-07,1;CL:1000600,5.90e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.10e-17!51;DOID:0060083!1.10e-17!51;DOID:0060058!1.36e-11!10;DOID:1240!7.34e-11!39;DOID:0050686!1.74e-10!137;DOID:162!3.12e-09!235;DOID:14566!1.05e-08!239;DOID:1749!1.72e-07!14 | |ontology_enrichment_disease=DOID:2531!1.10e-17!51;DOID:0060083!1.10e-17!51;DOID:0060058!1.36e-11!10;DOID:1240!7.34e-11!39;DOID:0050686!1.74e-10!137;DOID:162!3.12e-09!235;DOID:14566!1.05e-08!239;DOID:1749!1.72e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.14e-12;10!DOID:1749;3.21e-09;14!DOID:1799;6.23e-07;1!DOID:10165;6.23e-07;1!DOID:1798;6.23e-07;1!DOID:2355;9.40e-07;1 | |ontology_enrichment_disease_v019=DOID:0060058;1.14e-12;10!DOID:1749;3.21e-09;14!DOID:1799;6.23e-07;1!DOID:10165;6.23e-07;1!DOID:1798;6.23e-07;1!DOID:2355;9.40e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.08e-13,10;DOID:1749,3.42e-09,14;DOID:305,3.43e-09,106;DOID:162,2.46e-08,235;DOID:14566,4.72e-08,239;DOID:0050687,6.94e-08,143;DOID:1799,6.23e-07,1;DOID:10165,6.23e-07,1;DOID:1798,6.23e-07,1;DOID:2355,9.15e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.71e-12;2!UBERON:0005058;7.71e-12;2!UBERON:0009113;7.71e-12;2!UBERON:0004177;4.88e-10;5!UBERON:0005057;4.88e-10;5!UBERON:0006947;3.36e-08;3!UBERON:0004054;3.36e-08;3!UBERON:0003135;5.07e-08;11!UBERON:0001301;5.57e-07;1!UBERON:0004645;6.23e-07;1!UBERON:0001256;6.23e-07;1!UBERON:0001259;6.23e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002370;7.71e-12;2!UBERON:0005058;7.71e-12;2!UBERON:0009113;7.71e-12;2!UBERON:0004177;4.88e-10;5!UBERON:0005057;4.88e-10;5!UBERON:0006947;3.36e-08;3!UBERON:0004054;3.36e-08;3!UBERON:0003135;5.07e-08;11!UBERON:0001301;5.57e-07;1!UBERON:0004645;6.23e-07;1!UBERON:0001256;6.23e-07;1!UBERON:0001259;6.23e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,1.14e-08,10;UBERON:0006947,3.55e-08,3;UBERON:0004054,3.55e-08,3;UBERON:0003135,4.89e-08,11;UBERON:0004177,2.42e-07,7;UBERON:0005057,2.42e-07,7;UBERON:0001301,5.58e-07,1;UBERON:0004645,5.90e-07,1;UBERON:0001256,5.90e-07,1;UBERON:0001259,5.90e-07,1 | |||
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| ||
|short_description=p11@LCP1 | |short_description=p11@LCP1 | ||
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Latest revision as of 13:45, 17 September 2015
Short description: | p11@LCP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -299bp_to_ENST00000323076, NM_002298, uc001vba.3_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | P13796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lymphocyte of B lineage | 9.45e-10 | 24 |
pro-B cell | 9.45e-10 | 24 |
germ line cell | 1.78e-07 | 7 |
germ cell | 1.78e-07 | 7 |
bladder cell | 5.90e-07 | 1 |
lower urinary tract cell | 5.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neck | 1.14e-08 | 10 |
male genital duct | 3.55e-08 | 3 |
internal male genitalia | 3.55e-08 | 3 |
male reproductive organ | 4.89e-08 | 11 |
hemopoietic organ | 2.42e-07 | 7 |
immune organ | 2.42e-07 | 7 |
epididymis | 5.58e-07 | 1 |
urinary bladder urothelium | 5.90e-07 | 1 |
wall of urinary bladder | 5.90e-07 | 1 |
mucosa of urinary bladder | 5.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.08e-13 | 10 |
squamous cell carcinoma | 3.42e-09 | 14 |
carcinoma | 3.43e-09 | 106 |
cancer | 2.46e-08 | 235 |
disease of cellular proliferation | 4.72e-08 | 239 |
cell type cancer | 6.94e-08 | 143 |
islet cell tumor | 6.23e-07 | 1 |
endocrine pancreas cancer | 6.23e-07 | 1 |
pancreatic endocrine carcinoma | 6.23e-07 | 1 |
anemia | 9.15e-07 | 1 |