FFCP PHASE1:Hg19::chr22:38201228..38201242,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:38201228..38201242,+
|short_description=p1@H1F0
|description=CAGE_peak_1_at_H1F0_5end
|association_with_transcript=0bp_to_ENST00000455466_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3005 | |EntrezGene=3005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4714 | |HGNC=4714 | ||
|TSSclassifier=strong | |||
|UniProt=F5H022 | |UniProt=F5H022 | ||
|association_with_transcript=0bp_to_ENST00000455466_5end | |||
|cluster_id=chr22:38201228..38201242,+ | |||
|coexpression_cluster_id=C4099 | |||
|description=CAGE_peak_1_at_H1F0_5end | |||
|id=chr22:38201228..38201242,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.41e-12!254;CL:0000223!6.98e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.82e-12,253;CL:0000223,2.79e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.63e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!5.96e-20!143;DOID:305!1.32e-12!106;DOID:3095!2.42e-10!22;DOID:2994!2.42e-10!22;DOID:162!4.37e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.43e-10;22!DOID:2994;2.43e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.14e-20,143;DOID:305,1.36e-12,106;DOID:3095,2.42e-10,22;DOID:2994,2.42e-10,22;DOID:162,3.54e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.82e-15!169;UBERON:0000925!6.82e-15!169;UBERON:0006595!6.82e-15!169;UBERON:0000468!4.11e-13!659;UBERON:0001007!1.00e-12!155;UBERON:0001555!1.00e-12!155;UBERON:0007026!1.00e-12!155;UBERON:0000077!4.85e-12!130;UBERON:0004921!5.54e-12!129;UBERON:0004185!5.54e-12!129;UBERON:0000466!1.17e-11!126;UBERON:0000062!1.34e-11!511;UBERON:0001041!4.71e-10!98;UBERON:0000922!1.55e-09!612;UBERON:0000481!2.04e-09!347;UBERON:0005177!2.60e-09!107;UBERON:0001048!6.60e-09!168;UBERON:0000467!9.39e-09!625;UBERON:0000480!1.82e-08!626;UBERON:0000464!4.12e-08!104;UBERON:0005409!4.14e-08!35;UBERON:0000064!7.91e-08!219;UBERON:0002050!8.34e-08!605;UBERON:0005423!8.34e-08!605;UBERON:0000923!1.58e-07!604;UBERON:0005291!1.58e-07!604;UBERON:0006598!1.58e-07!604;UBERON:0002532!1.58e-07!604;UBERON:0000924!1.63e-07!173;UBERON:0006601!1.63e-07!173;UBERON:0000160!2.19e-07!27;UBERON:0007023!4.43e-07!115;UBERON:0005911!8.94e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.99e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.55e-13,223;UBERON:0004119,1.28e-12,160;UBERON:0000925,1.28e-12,160;UBERON:0006595,1.28e-12,160;UBERON:0005177,1.89e-10,101;UBERON:0001007,2.22e-10,145;UBERON:0001555,2.22e-10,145;UBERON:0007026,2.22e-10,145;UBERON:0004921,7.35e-10,118;UBERON:0001041,5.68e-08,87;UBERON:0000922,6.90e-08,592;UBERON:0004121,3.91e-07,171;UBERON:0000924,3.91e-07,171;UBERON:0006601,3.91e-07,171;UBERON:0007023,6.25e-07,114;UBERON:0005911,8.52e-07,82 | |||
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| ||
|short_description=p1@H1F0 | |||
}} | }} |
Latest revision as of 06:21, 20 September 2015
Short description: | p1@H1F0 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H1F0_5end |
Coexpression cluster: | C4099_malignant_Reticulocytes_rectal_neuroblastoma_choriocarcinoma_small_hepatocellular |
Association with transcript: | 0bp_to_ENST00000455466_5end |
EntrezGene: | H1F0 |
HGNC: | 4714 |
UniProt: | F5H022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.82e-12 | 253 |
endodermal cell | 2.79e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.55e-13 | 223 |
endoderm-derived structure | 1.28e-12 | 160 |
endoderm | 1.28e-12 | 160 |
presumptive endoderm | 1.28e-12 | 160 |
trunk region element | 1.89e-10 | 101 |
digestive system | 2.22e-10 | 145 |
digestive tract | 2.22e-10 | 145 |
primitive gut | 2.22e-10 | 145 |
subdivision of digestive tract | 7.35e-10 | 118 |
foregut | 5.68e-08 | 87 |
embryo | 6.90e-08 | 592 |
ectoderm-derived structure | 3.91e-07 | 171 |
ectoderm | 3.91e-07 | 171 |
presumptive ectoderm | 3.91e-07 | 171 |
adult organism | 6.25e-07 | 114 |
endo-epithelium | 8.52e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.14e-20 | 143 |
carcinoma | 1.36e-12 | 106 |
germ cell and embryonal cancer | 2.42e-10 | 22 |
germ cell cancer | 2.42e-10 | 22 |
cancer | 3.54e-07 | 235 |