FFCP PHASE1:Hg19::chr10:70320041..70320065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80312 | |EntrezGene=80312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29484 | |HGNC=29484 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFU7 | |UniProt=Q8NFU7 | ||
|association_with_transcript=-51bp_to_NM_030625,uc001jok.3_5end | |association_with_transcript=-51bp_to_NM_030625,uc001jok.3_5end | ||
|cluster_id=chr10:70320041..70320065,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_2_at_TET1_5end | |description=CAGE_peak_2_at_TET1_5end | ||
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|ontology_enrichment_celltype=CL:0000133!1.79e-07!59;CL:0000039!2.82e-07!7;CL:0000586!2.82e-07!7 | |ontology_enrichment_celltype=CL:0000133!1.79e-07!59;CL:0000039!2.82e-07!7;CL:0000586!2.82e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.47e-17;7!CL:0000586;2.47e-17;7!CL:0002321;1.64e-13;15!CL:0002322;4.74e-12;5!CL:0000333;1.25e-07;5 | |ontology_enrichment_celltype_v019=CL:0000039;2.47e-17;7!CL:0000586;2.47e-17;7!CL:0002321;1.64e-13;15!CL:0002322;4.74e-12;5!CL:0000333;1.25e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.17e-17,7;CL:0000586,2.17e-17,7;CL:0002322,5.11e-12,5;CL:0000047,6.38e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3095!2.99e-14!22;DOID:2994!2.99e-14!22;DOID:0050687!1.12e-13!143;DOID:162!1.54e-10!235;DOID:14566!5.05e-10!239;DOID:171!2.74e-07!10 | |ontology_enrichment_disease=DOID:3095!2.99e-14!22;DOID:2994!2.99e-14!22;DOID:0050687!1.12e-13!143;DOID:162!1.54e-10!235;DOID:14566!5.05e-10!239;DOID:171!2.74e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.10e-27;22!DOID:2994;8.10e-27;22!DOID:171;8.13e-08;10 | |ontology_enrichment_disease_v019=DOID:3095;8.10e-27;22!DOID:2994;8.10e-27;22!DOID:171;8.13e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,6.09e-27,22;DOID:2994,6.09e-27,22;DOID:162,1.06e-13,235;DOID:14566,3.97e-13,239;DOID:0050687,5.58e-13,143;DOID:171,8.11e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.73e-17;49!UBERON:0000013;1.25e-07;5!UBERON:0002410;1.25e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000922;1.73e-17;49!UBERON:0000013;1.25e-07;5!UBERON:0002410;1.25e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.12e-07,5;UBERON:0002410,1.12e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.567208902984407,0,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0,0,0,0.469737994575059,0.323745888736263,0.280901613404497,0,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0,0.340296549480063,0.358779271377724,0.213557388818567,0.847727604638247,0,0.309157587715317,0,0.37223371266318,0.337552664482532,0,1.26216887122057,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0,4.87894824518382,5.30119073285941,4.53156377191122,3.52447587052259,3.02785021050754,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,1.10689594688802,0.343135620597051,0,0,0.100528972411631,0.370353780634118,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.77866236955724,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0,0.500170521059677,0,0.207970861530807,0.535286966391485,0.315404830067869,0.35142424497814,0,0,0,0,0.921845842708516,0.695068915744663,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.846016147141356,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0.640986253728404,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.614014698904518,0.137836572484531,0.214840489736547,0.435050081742686,0.681813019328807,0.534192213880424,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.706874414074119,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,1.70918513803957,0,0.980160863924127,0.743212700502875,0,1.28055318027145,3.02909918184762,0,0.191505370132367,0,2.27235358192189,0,0,0.313359791546046,0,0,0,0,1.27753871307098,1.03051603426729,0.921722292925374,0.223676107892416,0.166849141711909,0.781552381608161,0,1.23087398947712,0.270455678475983,0,0,0,0.293016358543788,9.10203913121351,0,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0,5.48926061132783,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0.7812832832557,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0,1.74962768029953,2.2571249341328,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.384751292518985,0.227884111694002,14.2949620720597,4.93667044253747,4.67183699264635,0,0,1.06606955203727,0,0,0.166211681900156,4.96310453357798,4.70550082362575,4.02771808742022,1.70778359451767,0.317873157960757,0,0,0.848118428603645,4.9769387140681,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.202203398942031,0.802577647298789,0,0,0,0.485560759068186,0,1.20990716048664,2.14250933141343,0.379119477770928,0.751617097072463,1.45163467956146,0,0.661983911750998,0.313932918407225,1.19472429772959,0.569219092059585,1.10939738410511,0.867798691675654,0.685946781900644,0,0.17472666824203,0.343972064943233,0,0,0,0.484945082442097,1.5003541537555,0.90392296312213,0.274083849293502,0.397429223405979,0.0633107959558787,1.95551382734803,0,0.640358984218058,0.39961921916426,0.576361668616424,3.20702469264564,0.686379991447858,0,0.621262677827163,1.17847017308398,0.407712618220842,0.313808538937,0.101998217636322,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0.798716001995964,0,0,1.67958681216816,0.720599767084807,2.32991899054908,0.709048640765013,0.824158583811665,1.68508859635462,0.196854963029498,0,0,0,6.75163223553081,4.12618309791701,4.56984371832104,0,0,0.121499113316049,0,0.0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| ||
|short_description=p2@TET1 | |short_description=p2@TET1 | ||
}} | }} |
Latest revision as of 23:15, 18 September 2015
Short description: | p2@TET1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TET1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -51bp_to_NM_030625, uc001jok.3_5end |
EntrezGene: | TET1 |
HGNC: | 29484 |
UniProt: | Q8NFU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.17e-17 | 7 |
germ cell | 2.17e-17 | 7 |
embryonic stem cell | 5.11e-12 | 5 |
neuronal stem cell | 6.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.12e-07 | 5 |
autonomic nervous system | 1.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.09e-27 | 22 |
germ cell cancer | 6.09e-27 | 22 |
cancer | 1.06e-13 | 235 |
disease of cellular proliferation | 3.97e-13 | 239 |
cell type cancer | 5.58e-13 | 143 |
neuroectodermal tumor | 8.11e-08 | 10 |