FFCP PHASE1:Hg19::chr22:33257722..33257777,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:33257722..33257777,+
|short_description=p7@TIMP3
|description=CAGE_peak_7_at_TIMP3_5end
|association_with_transcript=142bp_to_AF035289_5end
|EntrezGene=7...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_AF035289_5end | |||
|cluster_id=chr22:33257722..33257777,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_7_at_TIMP3_5end | |||
|id=chr22:33257722..33257777,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.03e-13!180;CL:0000057!2.90e-09!75;CL:0002334!2.79e-08!12;CL:0000192!2.30e-07!42;CL:0000514!2.30e-07!42;CL:0000359!5.79e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;8.69e-12;12!CL:0000349;1.56e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-13,76;CL:0002334,1.28e-11,12;CL:0000349,1.29e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.96e-11!57;UBERON:0000475!7.34e-11!365;UBERON:0007023!2.22e-09!115;UBERON:0002385!6.85e-08!63;UBERON:0001015!6.85e-08!63;UBERON:0000383!6.85e-08!63;UBERON:0004290!1.30e-07!70;UBERON:0001134!1.78e-07!61;UBERON:0002036!1.78e-07!61;UBERON:0003082!1.78e-07!61;UBERON:0004872!2.01e-07!84;UBERON:0000486!8.00e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.30e-09;9!UBERON:0000042;6.30e-09;9!UBERON:0003688;1.77e-08;6!UBERON:0002358;1.77e-08;6!UBERON:0003684;1.77e-08;6!UBERON:0001178;1.77e-08;6!UBERON:0005631;3.37e-08;10!UBERON:0000158;3.37e-08;10!UBERON:0000478;1.35e-07;24!UBERON:0000948;7.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.17e-11,66;UBERON:0005631,1.99e-10,14;UBERON:0000158,1.99e-10,14;UBERON:0003688,1.88e-08,6;UBERON:0002358,1.88e-08,6;UBERON:0003684,1.88e-08,6;UBERON:0001178,1.88e-08,6;UBERON:0000478,1.17e-07,24;UBERON:0003124,1.65e-07,7;UBERON:0004457,1.79e-07,12;UBERON:0000042,1.79e-07,12;UBERON:0004872,2.45e-07,83;UBERON:0000948,3.99e-07,24;UBERON:0005498,3.99e-07,24;UBERON:0004140,3.99e-07,24;UBERON:0009881,3.99e-07,24;UBERON:0004141,3.99e-07,24;UBERON:0003084,3.99e-07,24;UBERON:0007005,3.99e-07,24;UBERON:0004139,3.99e-07,24;UBERON:0004291,3.99e-07,24;UBERON:0007100,6.20e-07,27 | |||
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| ||
|short_description=p7@TIMP3 | |||
}} | }} |
Latest revision as of 22:57, 19 September 2015
Short description: | p7@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 142bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-13 | 76 |
preadipocyte | 1.28e-11 | 12 |
extraembryonic cell | 1.29e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 2.17e-11 | 66 |
extraembryonic membrane | 1.99e-10 | 14 |
membranous layer | 1.99e-10 | 14 |
omentum | 1.88e-08 | 6 |
peritoneum | 1.88e-08 | 6 |
abdominal cavity | 1.88e-08 | 6 |
visceral peritoneum | 1.88e-08 | 6 |
extraembryonic structure | 1.17e-07 | 24 |
chorion | 1.65e-07 | 7 |
cavity lining | 1.79e-07 | 12 |
serous membrane | 1.79e-07 | 12 |
splanchnic layer of lateral plate mesoderm | 2.45e-07 | 83 |
heart | 3.99e-07 | 24 |
primitive heart tube | 3.99e-07 | 24 |
primary heart field | 3.99e-07 | 24 |
anterior lateral plate mesoderm | 3.99e-07 | 24 |
heart tube | 3.99e-07 | 24 |
heart primordium | 3.99e-07 | 24 |
cardiac mesoderm | 3.99e-07 | 24 |
cardiogenic plate | 3.99e-07 | 24 |
heart rudiment | 3.99e-07 | 24 |
primary circulatory organ | 6.20e-07 | 27 |