FFCP PHASE1:Hg19::chr6:75796121..75796128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_AK057081_5end | |association_with_transcript=92bp_to_AK057081_5end | ||
|cluster_id=chr6:75796121..75796128,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_12_at_COL12A1_5end | |description=CAGE_peak_12_at_COL12A1_5end | ||
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|ontology_enrichment_celltype=CL:0002620!3.25e-14!23;CL:0000057!1.55e-12!75;CL:0002334!4.44e-08!12;CL:0000048!4.96e-08!430;CL:0000723!5.53e-08!436;CL:0002320!6.29e-08!365;CL:0000055!8.87e-08!180;CL:0000134!1.23e-07!358;CL:0000136!1.43e-07!15;CL:0000034!1.94e-07!444 | |ontology_enrichment_celltype=CL:0002620!3.25e-14!23;CL:0000057!1.55e-12!75;CL:0002334!4.44e-08!12;CL:0000048!4.96e-08!430;CL:0000723!5.53e-08!436;CL:0002320!6.29e-08!365;CL:0000055!8.87e-08!180;CL:0000134!1.23e-07!358;CL:0000136!1.43e-07!15;CL:0000034!1.94e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.98e-22;3!CL:0002617;1.97e-15;2!CL:0002334;8.79e-15;12!CL:0002579;1.22e-10;3!CL:0002620;2.30e-10;23!CL:0000136;4.92e-09;13!CL:0002616;1.57e-08;1!CL:0000228;4.25e-08;1!CL:0002372;4.25e-08;1!CL:0000153;1.94e-07;9!CL:0000447;1.94e-07;9 | |ontology_enrichment_celltype_v019=CL:0002580;5.98e-22;3!CL:0002617;1.97e-15;2!CL:0002334;8.79e-15;12!CL:0002579;1.22e-10;3!CL:0002620;2.30e-10;23!CL:0000136;4.92e-09;13!CL:0002616;1.57e-08;1!CL:0000228;4.25e-08;1!CL:0002372;4.25e-08;1!CL:0000153;1.94e-07;9!CL:0000447;1.94e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.78e-22,3;CL:0002617,2.05e-15,2;CL:0002334,7.31e-15,12;CL:0000057,3.73e-11,76;CL:0002579,1.22e-10,3;CL:0002620,1.88e-10,23;CL:0002616,1.41e-08,1;CL:0000228,3.57e-08,1;CL:0002372,3.57e-08,1;CL:0000136,7.76e-08,15;CL:0000153,2.50e-07,9;CL:0000447,2.50e-07,9;CL:0000134,7.86e-07,354 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.25e-08;1!UBERON:0003852;4.25e-08;1 | |ontology_enrichment_development_v019=UBERON:0003099;4.25e-08;1!UBERON:0003852;4.25e-08;1 | ||
|ontology_enrichment_disease=DOID:17!1.20e-08!5;DOID:450!1.20e-08!5;DOID:66!1.20e-08!5;DOID:423!1.20e-08!5;DOID:0080000!1.20e-08!5;DOID:11722!1.20e-08!5;DOID:2394!1.69e-07!14 | |ontology_enrichment_disease=DOID:17!1.20e-08!5;DOID:450!1.20e-08!5;DOID:66!1.20e-08!5;DOID:423!1.20e-08!5;DOID:0080000!1.20e-08!5;DOID:11722!1.20e-08!5;DOID:2394!1.69e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:17;6.23e-13;5!DOID:450;6.23e-13;5!DOID:66;6.23e-13;5!DOID:423;6.23e-13;5!DOID:0080000;6.23e-13;5!DOID:11722;6.23e-13;5 | |ontology_enrichment_disease_v019=DOID:17;6.23e-13;5!DOID:450;6.23e-13;5!DOID:66;6.23e-13;5!DOID:423;6.23e-13;5!DOID:0080000;6.23e-13;5!DOID:11722;6.23e-13;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.22e-13,5;DOID:450,4.22e-13,5;DOID:66,4.22e-13,5;DOID:423,4.22e-13,5;DOID:0080000,4.22e-13,5;DOID:11722,4.22e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.37e-10!6;UBERON:0002358!2.37e-10!6;UBERON:0003684!2.37e-10!6;UBERON:0001178!2.37e-10!6;UBERON:0004457!6.95e-10!12;UBERON:0000042!6.95e-10!12;UBERON:0002097!1.06e-09!40;UBERON:0002199!5.85e-09!45;UBERON:0002416!5.85e-09!45;UBERON:0003102!1.02e-08!95;UBERON:0002384!1.44e-07!375 | |ontology_enrichment_uberon=UBERON:0003688!2.37e-10!6;UBERON:0002358!2.37e-10!6;UBERON:0003684!2.37e-10!6;UBERON:0001178!2.37e-10!6;UBERON:0004457!6.95e-10!12;UBERON:0000042!6.95e-10!12;UBERON:0002097!1.06e-09!40;UBERON:0002199!5.85e-09!45;UBERON:0002416!5.85e-09!45;UBERON:0003102!1.02e-08!95;UBERON:0002384!1.44e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;9.81e-18;10!UBERON:0001443;4.15e-16;11!UBERON:0004457;7.62e-13;9!UBERON:0000042;7.62e-13;9!UBERON:0003688;2.03e-11;6!UBERON:0002358;2.03e-11;6!UBERON:0003684;2.03e-11;6!UBERON:0001178;2.03e-11;6!UBERON:0005705;4.25e-08;1!UBERON:0008193;4.25e-08;1!UBERON:0010912;4.25e-08;1!UBERON:0002514;4.25e-08;1!UBERON:0003457;4.25e-08;1!UBERON:0008907;4.25e-08;1!UBERON:0008001;4.25e-08;1!UBERON:0007213;4.25e-08;1!UBERON:0009891;4.25e-08;1!UBERON:0007914;4.25e-08;1!UBERON:0007375;4.25e-08;1!UBERON:0003323;4.25e-08;1!UBERON:0010258;4.25e-08;1!UBERON:0005253;4.25e-08;1!UBERON:0007842;4.25e-08;1!UBERON:0002397;4.25e-08;1!UBERON:0003113;4.25e-08;1!UBERON:0003277;4.25e-08;1!UBERON:0001709;4.25e-08;1!UBERON:0002244;4.25e-08;1!UBERON:0005620;4.25e-08;1!UBERON:0010364;4.25e-08;1!UBERON:0004288;4.25e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000310;9.81e-18;10!UBERON:0001443;4.15e-16;11!UBERON:0004457;7.62e-13;9!UBERON:0000042;7.62e-13;9!UBERON:0003688;2.03e-11;6!UBERON:0002358;2.03e-11;6!UBERON:0003684;2.03e-11;6!UBERON:0001178;2.03e-11;6!UBERON:0005705;4.25e-08;1!UBERON:0008193;4.25e-08;1!UBERON:0010912;4.25e-08;1!UBERON:0002514;4.25e-08;1!UBERON:0003457;4.25e-08;1!UBERON:0008907;4.25e-08;1!UBERON:0008001;4.25e-08;1!UBERON:0007213;4.25e-08;1!UBERON:0009891;4.25e-08;1!UBERON:0007914;4.25e-08;1!UBERON:0007375;4.25e-08;1!UBERON:0003323;4.25e-08;1!UBERON:0010258;4.25e-08;1!UBERON:0005253;4.25e-08;1!UBERON:0007842;4.25e-08;1!UBERON:0002397;4.25e-08;1!UBERON:0003113;4.25e-08;1!UBERON:0003277;4.25e-08;1!UBERON:0001709;4.25e-08;1!UBERON:0002244;4.25e-08;1!UBERON:0005620;4.25e-08;1!UBERON:0010364;4.25e-08;1!UBERON:0004288;4.25e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.98e-18,10;UBERON:0001443,3.45e-16,11;UBERON:0003688,2.14e-11,6;UBERON:0002358,2.14e-11,6;UBERON:0003684,2.14e-11,6;UBERON:0001178,2.14e-11,6;UBERON:0004457,1.32e-09,12;UBERON:0000042,1.32e-09,12;UBERON:0005705,5.43e-08,1;UBERON:0008193,5.43e-08,1;UBERON:0010912,5.43e-08,1;UBERON:0002514,5.43e-08,1;UBERON:0003457,5.43e-08,1;UBERON:0008907,5.43e-08,1;UBERON:0008001,5.43e-08,1;UBERON:0007213,5.43e-08,1;UBERON:0009891,5.43e-08,1;UBERON:0007914,5.43e-08,1;UBERON:0009292,5.43e-08,1;UBERON:0003099,5.43e-08,1;UBERON:0007375,5.43e-08,1;UBERON:0003323,5.43e-08,1;UBERON:0010258,5.43e-08,1;UBERON:0007842,5.43e-08,1;UBERON:0009494,5.43e-08,1;UBERON:0010042,5.43e-08,1;UBERON:0010045,5.43e-08,1;UBERON:0010259,5.43e-08,1;UBERON:0010359,5.43e-08,1;UBERON:0009526,5.43e-08,1;UBERON:0002397,5.43e-08,1;UBERON:0003113,5.43e-08,1;UBERON:0003277,5.43e-08,1;UBERON:0001709,5.43e-08,1;UBERON:0004066,5.43e-08,1;UBERON:0002244,5.43e-08,1;UBERON:0005620,5.43e-08,1;UBERON:0004362,5.43e-08,1;UBERON:0010364,5.43e-08,1;UBERON:0010046,5.43e-08,1;UBERON:0005868,5.43e-08,1;UBERON:0007238,5.43e-08,1;UBERON:0004288,5.43e-08,1;UBERON:0004068,5.43e-08,1;UBERON:0010334,5.43e-08,1;UBERON:0003852,5.43e-08,1;UBERON:0010253,5.43e-08,1;UBERON:0002097,1.68e-07,41 | |||
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|short_description=p12@COL12A1 | |short_description=p12@COL12A1 | ||
}} | }} |
Latest revision as of 19:26, 19 September 2015
Short description: | p12@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_COL12A1_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 92bp_to_AK057081_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.78e-22 | 3 |
adipocyte of breast | 2.05e-15 | 2 |
preadipocyte | 7.31e-15 | 12 |
fibroblast | 3.73e-11 | 76 |
omentum preadipocyte | 1.22e-10 | 3 |
skin fibroblast | 1.88e-10 | 23 |
perirenal adipocyte cell | 1.41e-08 | 1 |
multinucleate cell | 3.57e-08 | 1 |
myotube | 3.57e-08 | 1 |
fat cell | 7.76e-08 | 15 |
GAG secreting cell | 2.50e-07 | 9 |
carbohydrate secreting cell | 2.50e-07 | 9 |
mesenchymal cell | 7.86e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.22e-13 | 5 |
myotonic disease | 4.22e-13 | 5 |
muscle tissue disease | 4.22e-13 | 5 |
myopathy | 4.22e-13 | 5 |
muscular disease | 4.22e-13 | 5 |
myotonic dystrophy | 4.22e-13 | 5 |