FFCP PHASE1:Hg19::chr2:95713709..95713720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:95713709..95713720,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr2:95713709..95713720,+ | |description=CAGE_peak_at_chr2:95713709..95713720,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000239;9.90e-11;3!CL:1000615;9.90e-11;3!CL:0002306;9.90e-11;3 | |ontology_enrichment_celltype_v019=CL:0000239;9.90e-11;3!CL:1000615;9.90e-11;3!CL:0002306;9.90e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.99e-11,3;CL:1000615,8.99e-11,3;CL:0002306,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.98e-30;1!UBERON:0005425;2.37e-29;1!UBERON:0008814;2.05e-15;2!UBERON:0010056;2.05e-15;2!UBERON:0003056;9.90e-11;3 | |ontology_enrichment_development_v019=UBERON:0009143;9.98e-30;1!UBERON:0005425;2.37e-29;1!UBERON:0008814;2.05e-15;2!UBERON:0010056;2.05e-15;2!UBERON:0003056;9.90e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr2:95713709..95713720,+ | |short_description=p@chr2:95713709..95713720,+ | ||
}} | }} |
Latest revision as of 13:11, 29 July 2015
Short description: | p@chr2:95713709..95713720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95713709..95713720, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.99e-11 | 3 |
kidney cortex tubule cell | 8.99e-11 | 3 |
epithelial cell of proximal tubule | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.64e-38 | 3 |
gustatory system | 2.64e-38 | 3 |
future tongue | 2.64e-38 | 3 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
throat | 1.15e-15 | 2 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
chordate pharynx | 2.81e-12 | 10 |
pharyngeal region of foregut | 2.81e-12 | 10 |
sense organ | 2.70e-11 | 24 |
sensory system | 2.70e-11 | 24 |
entire sense organ system | 2.70e-11 | 24 |
pharynx | 2.98e-11 | 11 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
renal cortex tubule | 8.99e-11 | 3 |
region of nephron tubule | 8.99e-11 | 3 |
proximal tubule | 8.99e-11 | 3 |
layer of retina | 2.26e-08 | 4 |
anterior region of body | 8.61e-08 | 62 |
craniocervical region | 8.61e-08 | 62 |
pharyngeal arch system | 3.04e-07 | 18 |
upper respiratory tract | 6.57e-07 | 19 |