FFCP PHASE1:Hg19::chrX:20236970..20237027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6197 | |EntrezGene=6197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10432 | |HGNC=10432 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYC4 | |UniProt=F5GYC4 | ||
|association_with_transcript=0bp_to_ENST00000379548,ENST00000474266,uc011mjk.1_5end | |association_with_transcript=0bp_to_ENST00000379548,ENST00000474266,uc011mjk.1_5end | ||
|cluster_id=chrX:20236970..20237027,- | |||
|coexpression_cluster_id=C328 | |coexpression_cluster_id=C328 | ||
|description=CAGE_peak_4_at_RPS6KA3_5end | |description=CAGE_peak_4_at_RPS6KA3_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.94e-23!24;CL:0000115!9.35e-18!35;CL:0000071!1.29e-17!18;CL:0002546!1.29e-17!18;CL:0002078!1.11e-11!44;CL:1000413!1.71e-09!9;CL:0005020!2.21e-07!6;CL:0002138!2.21e-07!6;CL:0005022!2.21e-07!6;CL:0002543!6.01e-07!6;CL:0002544!8.51e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.94e-23!24;CL:0000115!9.35e-18!35;CL:0000071!1.29e-17!18;CL:0002546!1.29e-17!18;CL:0002078!1.11e-11!44;CL:1000413!1.71e-09!9;CL:0005020!2.21e-07!6;CL:0002138!2.21e-07!6;CL:0005022!2.21e-07!6;CL:0002543!6.01e-07!6;CL:0002544!8.51e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-33;24!CL:0000071;3.82e-25;18!CL:0000115;6.90e-23;36!CL:0002078;2.75e-13;45!CL:1000413;3.41e-13;9!CL:0002138;4.13e-10;6!CL:0002543;1.77e-09;6!CL:0002544;2.92e-09;6!CL:0000213;1.32e-08;58!CL:0000215;1.32e-08;58 | |ontology_enrichment_celltype_v019=CL:0002139;1.01e-33;24!CL:0000071;3.82e-25;18!CL:0000115;6.90e-23;36!CL:0002078;2.75e-13;45!CL:1000413;3.41e-13;9!CL:0002138;4.13e-10;6!CL:0002543;1.77e-09;6!CL:0002544;2.92e-09;6!CL:0000213;1.32e-08;58!CL:0000215;1.32e-08;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-33,24;CL:0000115,4.62e-27,36;CL:0000071,3.88e-25,18;CL:0002546,3.88e-25,18;CL:0002078,1.45e-19,45;CL:1000413,3.35e-13,9;CL:0000213,5.32e-13,58;CL:0000215,5.32e-13,58;CL:0005020,4.13e-10,6;CL:0002138,4.13e-10,6;CL:0005022,4.13e-10,6;CL:0002543,1.78e-09,6;CL:0002544,2.96e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.82e-25;18!CL:0005022;4.13e-10;6!UBERON:0004872;6.51e-07;7 | |ontology_enrichment_development_v019=CL:0002546;3.82e-25;18!CL:0005022;4.13e-10;6!UBERON:0004872;6.51e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-49!115;UBERON:0004111!9.90e-31!241;UBERON:0000025!1.85e-27!194;UBERON:0000477!3.22e-27!286;UBERON:0001049!6.02e-24!57;UBERON:0005068!6.02e-24!57;UBERON:0006241!6.02e-24!57;UBERON:0007135!6.02e-24!57;UBERON:0002616!1.07e-20!59;UBERON:0003080!2.69e-19!42;UBERON:0003075!1.50e-18!86;UBERON:0007284!1.50e-18!86;UBERON:0002780!1.89e-18!41;UBERON:0001890!1.89e-18!41;UBERON:0006240!1.89e-18!41;UBERON:0002346!1.26e-17!90;UBERON:0001986!1.29e-17!18;UBERON:0004638!1.29e-17!18;UBERON:0004852!1.29e-17!18;UBERON:0000483!3.79e-17!309;UBERON:0000119!6.25e-17!312;UBERON:0000955!1.57e-16!69;UBERON:0006238!1.57e-16!69;UBERON:0001017!3.94e-16!82;UBERON:0002020!1.81e-15!34;UBERON:0003528!1.81e-15!34;UBERON:0005743!2.39e-15!86;UBERON:0000487!3.24e-15!22;UBERON:0001893!4.80e-15!34;UBERON:0002791!1.37e-14!33;UBERON:0001869!6.23e-14!32;UBERON:0000073!2.27e-13!94;UBERON:0001016!2.27e-13!94;UBERON:0002619!1.07e-12!22;UBERON:0003056!2.25e-12!61;UBERON:0006914!2.31e-12!25;UBERON:0001950!1.42e-11!20;UBERON:0004872!1.53e-11!84;UBERON:0000467!5.69e-11!625;UBERON:0000480!7.50e-11!626;UBERON:0000956!2.50e-10!25;UBERON:0000203!2.50e-10!25;UBERON:0000055!3.19e-10!69;UBERON:0000468!3.31e-10!659;UBERON:0000153!4.89e-10!129;UBERON:0007811!4.89e-10!129;UBERON:0001009!5.34e-10!113;UBERON:0003914!8.86e-10!118;UBERON:0002049!1.05e-09!79;UBERON:0007798!1.05e-09!79;UBERON:0003915!1.71e-09!9;UBERON:0004700!1.71e-09!9;UBERON:0001917!1.71e-09!9;UBERON:0000033!3.12e-09!123;UBERON:0004535!6.36e-09!110;UBERON:0000481!1.73e-08!347;UBERON:0000922!2.02e-08!612;UBERON:0002050!2.03e-08!605;UBERON:0005423!2.03e-08!605;UBERON:0007100!3.64e-08!27;UBERON:0000923!3.80e-08!604;UBERON:0005291!3.80e-08!604;UBERON:0006598!3.80e-08!604;UBERON:0002532!3.80e-08!604;UBERON:0003103!5.91e-08!69;UBERON:0001981!9.33e-08!60;UBERON:0007500!9.33e-08!60;UBERON:0004537!9.33e-08!60;UBERON:0006965!9.33e-08!60;UBERON:0002298!5.56e-07!8;UBERON:0002308!7.35e-07!9;UBERON:0000125!7.35e-07!9;UBERON:0002420!9.38e-07!9;UBERON:0007245!9.38e-07!9;UBERON:0010009!9.38e-07!9;UBERON:0010011!9.38e-07!9;UBERON:0000454!9.38e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!6.70e-49!115;UBERON:0004111!9.90e-31!241;UBERON:0000025!1.85e-27!194;UBERON:0000477!3.22e-27!286;UBERON:0001049!6.02e-24!57;UBERON:0005068!6.02e-24!57;UBERON:0006241!6.02e-24!57;UBERON:0007135!6.02e-24!57;UBERON:0002616!1.07e-20!59;UBERON:0003080!2.69e-19!42;UBERON:0003075!1.50e-18!86;UBERON:0007284!1.50e-18!86;UBERON:0002780!1.89e-18!41;UBERON:0001890!1.89e-18!41;UBERON:0006240!1.89e-18!41;UBERON:0002346!1.26e-17!90;UBERON:0001986!1.29e-17!18;UBERON:0004638!1.29e-17!18;UBERON:0004852!1.29e-17!18;UBERON:0000483!3.79e-17!309;UBERON:0000119!6.25e-17!312;UBERON:0000955!1.57e-16!69;UBERON:0006238!1.57e-16!69;UBERON:0001017!3.94e-16!82;UBERON:0002020!1.81e-15!34;UBERON:0003528!1.81e-15!34;UBERON:0005743!2.39e-15!86;UBERON:0000487!3.24e-15!22;UBERON:0001893!4.80e-15!34;UBERON:0002791!1.37e-14!33;UBERON:0001869!6.23e-14!32;UBERON:0000073!2.27e-13!94;UBERON:0001016!2.27e-13!94;UBERON:0002619!1.07e-12!22;UBERON:0003056!2.25e-12!61;UBERON:0006914!2.31e-12!25;UBERON:0001950!1.42e-11!20;UBERON:0004872!1.53e-11!84;UBERON:0000467!5.69e-11!625;UBERON:0000480!7.50e-11!626;UBERON:0000956!2.50e-10!25;UBERON:0000203!2.50e-10!25;UBERON:0000055!3.19e-10!69;UBERON:0000468!3.31e-10!659;UBERON:0000153!4.89e-10!129;UBERON:0007811!4.89e-10!129;UBERON:0001009!5.34e-10!113;UBERON:0003914!8.86e-10!118;UBERON:0002049!1.05e-09!79;UBERON:0007798!1.05e-09!79;UBERON:0003915!1.71e-09!9;UBERON:0004700!1.71e-09!9;UBERON:0001917!1.71e-09!9;UBERON:0000033!3.12e-09!123;UBERON:0004535!6.36e-09!110;UBERON:0000481!1.73e-08!347;UBERON:0000922!2.02e-08!612;UBERON:0002050!2.03e-08!605;UBERON:0005423!2.03e-08!605;UBERON:0007100!3.64e-08!27;UBERON:0000923!3.80e-08!604;UBERON:0005291!3.80e-08!604;UBERON:0006598!3.80e-08!604;UBERON:0002532!3.80e-08!604;UBERON:0003103!5.91e-08!69;UBERON:0001981!9.33e-08!60;UBERON:0007500!9.33e-08!60;UBERON:0004537!9.33e-08!60;UBERON:0006965!9.33e-08!60;UBERON:0002298!5.56e-07!8;UBERON:0002308!7.35e-07!9;UBERON:0000125!7.35e-07!9;UBERON:0002420!9.38e-07!9;UBERON:0007245!9.38e-07!9;UBERON:0010009!9.38e-07!9;UBERON:0010011!9.38e-07!9;UBERON:0000454!9.38e-07!9 | ||
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| ||
|short_description=p4@RPS6KA3 | |short_description=p4@RPS6KA3 | ||
}} | }} |
Latest revision as of 16:16, 24 September 2015
Short description: | p4@RPS6KA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPS6KA3_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_ENST00000379548, ENST00000474266, uc011mjk.1_5end |
EntrezGene: | RPS6KA3 |
HGNC: | 10432 |
UniProt: | F5GYC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-33 | 24 |
endothelial cell | 4.62e-27 | 36 |
blood vessel endothelial cell | 3.88e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.88e-25 | 18 |
meso-epithelial cell | 1.45e-19 | 45 |
endothelial cell of artery | 3.35e-13 | 9 |
lining cell | 5.32e-13 | 58 |
barrier cell | 5.32e-13 | 58 |
lymphangioblast | 4.13e-10 | 6 |
endothelial cell of lymphatic vessel | 4.13e-10 | 6 |
vascular lymphangioblast | 4.13e-10 | 6 |
vein endothelial cell | 1.78e-09 | 6 |
aortic endothelial cell | 2.96e-09 | 6 |