FFCP PHASE1:Hg19::chr21:35893999..35894014,-: Difference between revisions
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|id=chr21:35893999..35894014,-
|short_description=p11@RCAN1
|description=CAGE_peak_11_at_RCAN1_5end
|association_with_transcript=-118bp_to_ENST00000487434_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1827 | |EntrezGene=1827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3040 | |HGNC=3040 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_ENST00000487434_5end | |||
|cluster_id=chr21:35893999..35894014,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_RCAN1_5end | |||
|id=chr21:35893999..35894014,- | |||
|ontology_enrichment_celltype=CL:0000181!9.16e-24!12;CL:0000417!9.16e-24!12;CL:0000668!9.16e-24!12;CL:0000414!9.16e-24!12;CL:0000412!9.16e-24!12;CL:0000182!9.16e-24!12;CL:0000223!1.32e-09!59;CL:0002563!9.62e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.49e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.66e-26!19;UBERON:0006925!2.66e-26!19;UBERON:0008836!2.66e-26!19;UBERON:0008835!1.40e-22!22;UBERON:0003894!1.40e-22!22;UBERON:0009854!1.49e-21!23;UBERON:0007499!9.53e-20!25;UBERON:0009497!9.53e-20!25;UBERON:0000015!9.53e-20!25;UBERON:0002423!9.53e-20!25;UBERON:0006235!9.53e-20!25;UBERON:0004161!9.53e-20!25;UBERON:0005057!6.00e-19!26;UBERON:0009856!6.00e-19!26;UBERON:0003929!4.07e-16!54;UBERON:0002365!1.00e-15!31;UBERON:0002330!1.00e-15!31;UBERON:0002368!8.31e-14!35;UBERON:0004921!6.29e-13!129;UBERON:0004185!6.29e-13!129;UBERON:0005911!5.16e-12!82;UBERON:0005172!1.37e-10!55;UBERON:0005173!1.37e-10!55;UBERON:0000949!1.68e-10!45;UBERON:0001007!2.74e-10!155;UBERON:0001555!2.74e-10!155;UBERON:0007026!2.74e-10!155;UBERON:0000160!8.28e-10!27;UBERON:0002530!9.34e-10!59;UBERON:0002417!2.04e-09!61;UBERON:0000916!2.04e-09!61;UBERON:0002135!2.55e-09!1;UBERON:0004119!3.35e-09!169;UBERON:0000925!3.35e-09!169;UBERON:0006595!3.35e-09!169;UBERON:0001242!9.62e-09!4;UBERON:0001262!9.62e-09!4;UBERON:0004786!9.62e-09!4;UBERON:0004808!9.62e-09!4;UBERON:0001277!9.62e-09!4;UBERON:0005409!1.61e-07!35;UBERON:0003350!3.67e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.31e-24;19!UBERON:0006925;4.31e-24;19!UBERON:0002423;2.34e-18;25!UBERON:0002365;8.38e-15;31!UBERON:0002330;8.38e-15;31!UBERON:0002368;7.78e-13;33!UBERON:0000949;2.22e-09;43!UBERON:0005172;7.69e-07;52!UBERON:0005173;7.69e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.21e-24,19;UBERON:0006925,4.21e-24,19;UBERON:0008836,4.21e-24,19;UBERON:0008835,7.62e-21,22;UBERON:0003894,7.62e-21,22;UBERON:0009854,6.02e-20,23;UBERON:0007499,2.30e-18,25;UBERON:0009497,2.30e-18,25;UBERON:0000015,2.30e-18,25;UBERON:0002423,2.30e-18,25;UBERON:0006235,2.30e-18,25;UBERON:0004161,2.30e-18,25;UBERON:0009856,1.15e-17,26;UBERON:0002365,7.70e-15,31;UBERON:0002330,7.70e-15,31;UBERON:0002368,3.71e-13,35;UBERON:0000949,2.99e-10,45;UBERON:0004921,2.98e-09,118;UBERON:0003929,1.51e-08,54;UBERON:0005172,1.51e-08,54;UBERON:0005173,1.51e-08,54;UBERON:0005911,7.56e-08,82;UBERON:0002530,7.98e-08,59;UBERON:0002417,1.08e-07,60;UBERON:0000916,1.08e-07,60;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0001041,2.20e-07,87 | |||
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|short_description=p11@RCAN1 | |||
}} | }} |
Latest revision as of 06:02, 18 September 2015
Short description: | p11@RCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RCAN1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -118bp_to_ENST00000487434_5end |
EntrezGene: | RCAN1 |
HGNC: | 3040 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.21e-24 | 19 |
digestive gland | 4.21e-24 | 19 |
liver bud | 4.21e-24 | 19 |
hepatic diverticulum | 7.62e-21 | 22 |
liver primordium | 7.62e-21 | 22 |
digestive tract diverticulum | 6.02e-20 | 23 |
epithelial sac | 2.30e-18 | 25 |
epithelium of foregut-midgut junction | 2.30e-18 | 25 |
anatomical boundary | 2.30e-18 | 25 |
hepatobiliary system | 2.30e-18 | 25 |
foregut-midgut junction | 2.30e-18 | 25 |
septum transversum | 2.30e-18 | 25 |
sac | 1.15e-17 | 26 |
exocrine gland | 7.70e-15 | 31 |
exocrine system | 7.70e-15 | 31 |
endocrine gland | 3.71e-13 | 35 |
endocrine system | 2.99e-10 | 45 |
subdivision of digestive tract | 2.98e-09 | 118 |
gut epithelium | 1.51e-08 | 54 |
abdomen element | 1.51e-08 | 54 |
abdominal segment element | 1.51e-08 | 54 |
endo-epithelium | 7.56e-08 | 82 |
gland | 7.98e-08 | 59 |
abdominal segment of trunk | 1.08e-07 | 60 |
abdomen | 1.08e-07 | 60 |
digestive system | 1.95e-07 | 145 |
digestive tract | 1.95e-07 | 145 |
primitive gut | 1.95e-07 | 145 |
foregut | 2.20e-07 | 87 |