FFCP PHASE1:Hg19::chr11:47470703..47470715,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5913 | |EntrezGene=5913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |HGNC=9863 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000352508_5end | |association_with_transcript=-8bp_to_ENST00000352508_5end | ||
|cluster_id=chr11:47470703..47470715,- | |||
|coexpression_cluster_id=C737 | |coexpression_cluster_id=C737 | ||
|description=CAGE_peak_3_at_RAPSN_5end | |description=CAGE_peak_3_at_RAPSN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.33e-21!9;CL:0000515!1.32e-13!4;CL:0000242!2.72e-07!2;CL:0002575!3.08e-07!2 | |ontology_enrichment_celltype=CL:0000188!1.33e-21!9;CL:0000515!1.32e-13!4;CL:0000242!2.72e-07!2;CL:0002575!3.08e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000056;8.49e-35;4!CL:0000680;1.43e-30;7!CL:0000515;1.98e-26;3!CL:0000188;4.31e-24;9!CL:0000228;3.71e-10;1!CL:0002372;3.71e-10;1!CL:0002321;1.83e-09;15 | |ontology_enrichment_celltype_v019=CL:0000056;8.49e-35;4!CL:0000680;1.43e-30;7!CL:0000515;1.98e-26;3!CL:0000188;4.31e-24;9!CL:0000228;3.71e-10;1!CL:0002372;3.71e-10;1!CL:0002321;1.83e-09;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.13e-35,4;CL:0000188,5.23e-24,9;CL:0000228,3.71e-10,1;CL:0002372,3.71e-10,1;CL:0000680,1.55e-08,58;CL:0000056,1.55e-08,58;CL:0000355,1.55e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000515;8.49e-35;4!UBERON:0000358;5.54e-10;1 | |ontology_enrichment_development_v019=CL:0000515;8.49e-35;4!UBERON:0000358;5.54e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.10e-15!115;UBERON:0001134!1.55e-09!61;UBERON:0002036!1.55e-09!61;UBERON:0003082!1.55e-09!61;UBERON:0002385!4.13e-09!63;UBERON:0001015!4.13e-09!63;UBERON:0000383!4.13e-09!63;UBERON:0004290!8.02e-08!70;UBERON:0000475!1.42e-07!365;UBERON:0000341!1.50e-07!2;UBERON:0001630!1.54e-07!2;UBERON:0005090!1.54e-07!2;UBERON:0003127!5.85e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!5.10e-15!115;UBERON:0001134!1.55e-09!61;UBERON:0002036!1.55e-09!61;UBERON:0003082!1.55e-09!61;UBERON:0002385!4.13e-09!63;UBERON:0001015!4.13e-09!63;UBERON:0000383!4.13e-09!63;UBERON:0004290!8.02e-08!70;UBERON:0000475!1.42e-07!365;UBERON:0000341!1.50e-07!2;UBERON:0001630!1.54e-07!2;UBERON:0005090!1.54e-07!2;UBERON:0003127!5.85e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.03e-64;16!UBERON:0002036;5.03e-64;16!UBERON:0002385;1.25e-31;31!UBERON:0001015;1.25e-31;31!UBERON:0000383;1.25e-31;31!UBERON:0000341;5.34e-18;2!UBERON:0001723;1.78e-12;3!UBERON:0001033;1.78e-12;3!UBERON:0001389;2.84e-10;1!UBERON:0000026;2.84e-10;1!UBERON:0008784;2.84e-10;1!UBERON:0006058;2.84e-10;1!UBERON:0003663;2.84e-10;1!UBERON:0004256;2.84e-10;1!UBERON:0004708;2.84e-10;1!UBERON:0002101;2.84e-10;1!UBERON:0004709;2.84e-10;1!UBERON:0002529;2.84e-10;1!UBERON:0010538;2.84e-10;1!UBERON:0003661;2.84e-10;1!UBERON:0010890;2.84e-10;1!UBERON:0002471;2.84e-10;1!UBERON:0001383;2.84e-10;1!UBERON:0010758;2.84e-10;1!UBERON:0010707;2.84e-10;1!UBERON:0000978;2.84e-10;1!UBERON:0002103;2.84e-10;1!UBERON:0001665;2.84e-10;1!UBERON:0003823;2.84e-10;1!UBERON:0000154;2.84e-10;1!UBERON:0010709;2.84e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0001134;5.03e-64;16!UBERON:0002036;5.03e-64;16!UBERON:0002385;1.25e-31;31!UBERON:0001015;1.25e-31;31!UBERON:0000383;1.25e-31;31!UBERON:0000341;5.34e-18;2!UBERON:0001723;1.78e-12;3!UBERON:0001033;1.78e-12;3!UBERON:0001389;2.84e-10;1!UBERON:0000026;2.84e-10;1!UBERON:0008784;2.84e-10;1!UBERON:0006058;2.84e-10;1!UBERON:0003663;2.84e-10;1!UBERON:0004256;2.84e-10;1!UBERON:0004708;2.84e-10;1!UBERON:0002101;2.84e-10;1!UBERON:0004709;2.84e-10;1!UBERON:0002529;2.84e-10;1!UBERON:0010538;2.84e-10;1!UBERON:0003661;2.84e-10;1!UBERON:0010890;2.84e-10;1!UBERON:0002471;2.84e-10;1!UBERON:0001383;2.84e-10;1!UBERON:0010758;2.84e-10;1!UBERON:0010707;2.84e-10;1!UBERON:0000978;2.84e-10;1!UBERON:0002103;2.84e-10;1!UBERON:0001665;2.84e-10;1!UBERON:0003823;2.84e-10;1!UBERON:0000154;2.84e-10;1!UBERON:0010709;2.84e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.48e-18,2;UBERON:0001134,3.00e-15,62;UBERON:0002036,3.00e-15,62;UBERON:0003082,3.00e-15,62;UBERON:0002385,1.02e-14,64;UBERON:0001015,1.02e-14,64;UBERON:0000383,1.02e-14,64;UBERON:0002329,4.30e-13,71;UBERON:0003059,4.30e-13,71;UBERON:0007282,4.30e-13,71;UBERON:0004290,4.30e-13,71;UBERON:0009618,4.30e-13,71;UBERON:0003077,6.92e-13,72;UBERON:0007285,6.92e-13,72;UBERON:0007524,1.10e-12,73;UBERON:0001723,1.50e-12,3;UBERON:0001033,1.50e-12,3;UBERON:0010056,1.50e-12,3;UBERON:0007503,9.28e-12,78;UBERON:0000486,6.06e-11,83;UBERON:0005418,2.84e-10,1;UBERON:0001389,2.84e-10,1;UBERON:0000026,2.84e-10,1;UBERON:0008784,2.84e-10,1;UBERON:0006058,2.84e-10,1;UBERON:0003663,2.84e-10,1;UBERON:0004256,2.84e-10,1;UBERON:0004708,2.84e-10,1;UBERON:0002101,2.84e-10,1;UBERON:0004709,2.84e-10,1;UBERON:0002529,2.84e-10,1;UBERON:0010538,2.84e-10,1;UBERON:0003661,2.84e-10,1;UBERON:0010890,2.84e-10,1;UBERON:0002471,2.84e-10,1;UBERON:0001383,2.84e-10,1;UBERON:0004357,2.84e-10,1;UBERON:0004347,2.84e-10,1;UBERON:0005420,2.84e-10,1;UBERON:0005732,2.84e-10,1;UBERON:0010758,2.84e-10,1;UBERON:0010707,2.84e-10,1;UBERON:0000978,2.84e-10,1;UBERON:0002103,2.84e-10,1;UBERON:0001665,2.84e-10,1;UBERON:0003823,2.84e-10,1;UBERON:0000154,2.84e-10,1;UBERON:0010709,2.84e-10,1;UBERON:0005733,2.84e-10,1;UBERON:0005730,2.84e-10,1;UBERON:0005256,7.30e-10,122;UBERON:0000490,9.65e-08,148;UBERON:0003104,5.38e-07,160;UBERON:0009142,5.38e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,2.31650090668127,1.64381058040307,6.62525563987614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,6.86286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,3.67348729510063,0.308097234229289,0.460511024178389,2.20538515975249,0,0.290033387828457,1.19317278382541,12.4644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,1.44921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0012494098419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,15.1256696903244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76914604625474,8.41835016221226,10.4383298820438,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,2.55880778281177,1.42838658878244,0.129177819672012,0,0,0.190941474834495,0.404234377916439,2.8303177226605,2.39563310759697,0.0673520530145875,0.143444410785353,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,2.31650090668127,1.64381058040307,6.62525563987614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,6.86286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,3.67348729510063,0.308097234229289,0.460511024178389,2.20538515975249,0,0.290033387828457,1.19317278382541,12.4644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,1.44921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0012494098419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,15.1256696903244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76914604625474,8.41835016221226,10.4383298820438,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,2.55880778281177,1.42838658878244,0.129177819672012,0,0,0.190941474834495,0.404234377916439,2.8303177226605,2.39563310759697,0.0673520530145875,0.143444410785353,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p3@RAPSN | |short_description=p3@RAPSN | ||
}} | }} |
Latest revision as of 05:34, 18 September 2015
Short description: | p3@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAPSN_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | -8bp_to_ENST00000352508_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.13e-35 | 4 |
cell of skeletal muscle | 5.23e-24 | 9 |
multinucleate cell | 3.71e-10 | 1 |
myotube | 3.71e-10 | 1 |
muscle precursor cell | 1.55e-08 | 58 |
myoblast | 1.55e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.55e-08 | 58 |